RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 CAPN15O75808 1086 aa19.94■□□□□ 0.78
SIK3-211ENST00000485363 APOBEC3FQ8IUX4 373 aaKnown RBP19.94■□□□□ 0.78
SIK3-211ENST00000485363 NOB1Q9ULX3 412 aaKnown RBP19.94■□□□□ 0.78
SIK3-211ENST00000485363 HIBADHP31937 336 aaKnown RBP19.93■□□□□ 0.78
SIK3-211ENST00000485363 DLGAP5Q15398 846 aa19.93■□□□□ 0.78
SIK3-211ENST00000485363 SLC10A3P09131 477 aa19.92■□□□□ 0.78
SIK3-211ENST00000485363 NF2P35240 595 aa19.92■□□□□ 0.78
SIK3-211ENST00000485363 GYG1P46976 350 aa19.92■□□□□ 0.78
SIK3-211ENST00000485363 LRRC24Q50LG9 513 aa19.92■□□□□ 0.78
SIK3-211ENST00000485363 METTL24Q5JXM2 366 aa19.92■□□□□ 0.78
SIK3-211ENST00000485363 PRAMEF18Q5VWM3 479 aa19.92■□□□□ 0.78
SIK3-211ENST00000485363 TDRD7Q8NHU6 1098 aaKnown RBP19.92■□□□□ 0.78
SIK3-211ENST00000485363 ZBED3Q96IU2 234 aaPredicted RBP19.92■□□□□ 0.78
SIK3-211ENST00000485363 ZIC5Q96T25 663 aa19.92■□□□□ 0.78
SIK3-211ENST00000485363 API5Q9BZZ5 524 aaKnown RBP19.92■□□□□ 0.78
SIK3-211ENST00000485363 JAG2Q9Y219 1238 aa19.92■□□□□ 0.78
SIK3-211ENST00000485363 ECM29Q5VYK3 1845 aa19.91■□□□□ 0.78
SIK3-211ENST00000485363 F8W031 263 aaPredicted RBP19.91■□□□□ 0.78
SIK3-211ENST00000485363 MTMR14Q8NCE2 650 aa19.91■□□□□ 0.78
SIK3-211ENST00000485363 FAM84BQ96KN1 310 aaPredicted RBP19.91■□□□□ 0.78
SIK3-211ENST00000485363 TSKSQ9UJT2 592 aa19.91■□□□□ 0.78
SIK3-211ENST00000485363 FAM205AQ6ZU69 1335 aa19.91■□□□□ 0.78
SIK3-211ENST00000485363 PDE8BO95263 885 aa19.9■□□□□ 0.78
SIK3-211ENST00000485363 KIF23Q02241 960 aaPredicted RBP19.9■□□□□ 0.78
SIK3-211ENST00000485363 VPS37DQ86XT2 251 aa19.9■□□□□ 0.78
SIK3-211ENST00000485363 KLHDC4Q8TBB5 520 aa19.9■□□□□ 0.78
SIK3-211ENST00000485363 MYO1BO43795 1136 aa19.89■□□□□ 0.77
SIK3-211ENST00000485363 COL1A1P02452 1464 aaPredicted RBP19.89■□□□□ 0.77
SIK3-211ENST00000485363 UBTFL1P0CB47 393 aaPredicted RBP19.89■□□□□ 0.77
SIK3-211ENST00000485363 RARSP54136 660 aaKnown RBP19.89■□□□□ 0.77
SIK3-211ENST00000485363 TTLL12Q14166 644 aaPredicted RBP19.89■□□□□ 0.77
SIK3-211ENST00000485363 CFAP100Q494V2 611 aa19.89■□□□□ 0.77
SIK3-211ENST00000485363 CAVIN4Q5BKX8 364 aa19.89■□□□□ 0.77
SIK3-211ENST00000485363 MOB2Q70IA6 237 aa19.89■□□□□ 0.77
SIK3-211ENST00000485363 VGLL2Q8N8G2 317 aa19.89■□□□□ 0.77
SIK3-211ENST00000485363 KIF16BQ96L93 1317 aa19.88■□□□□ 0.77
SIK3-211ENST00000485363 MFSD14BQ5SR56 506 aa19.88■□□□□ 0.77
SIK3-211ENST00000485363 RASAL3Q86YV0 1011 aa19.88■□□□□ 0.77
SIK3-211ENST00000485363 HDAC5Q9UQL6 1122 aa19.88■□□□□ 0.77
SIK3-211ENST00000485363 AKAP11Q9UKA4 1901 aa19.87■□□□□ 0.77
SIK3-211ENST00000485363 SPDYE2BA6NHP3 402 aa19.87■□□□□ 0.77
SIK3-211ENST00000485363 UBE2Q2LH0YL09 131 aa19.87■□□□□ 0.77
SIK3-211ENST00000485363 SPDYE6P0CI01 402 aa19.87■□□□□ 0.77
SIK3-211ENST00000485363 RBM5P52756 815 aaKnown RBP eCLIP19.87■□□□□ 0.77
SIK3-211ENST00000485363 FBXO33Q7Z6M2 555 aa19.87■□□□□ 0.77
SIK3-211ENST00000485363 REM2Q8IYK8 340 aaPredicted RBP19.87■□□□□ 0.77
SIK3-211ENST00000485363 DEFB129Q9H1M3 183 aa19.87■□□□□ 0.77
SIK3-211ENST00000485363 ARAP2Q8WZ64 1704 aa19.87■□□□□ 0.77
SIK3-211ENST00000485363 EYA2O00167 538 aa19.86■□□□□ 0.77
SIK3-211ENST00000485363 RFX5P48382 616 aaPredicted RBP19.86■□□□□ 0.77
SIK3-211ENST00000485363 PUM3Q15397 648 aaKnown RBP19.86■□□□□ 0.77
SIK3-211ENST00000485363 ARHGAP45Q92619 1136 aa19.86■□□□□ 0.77
SIK3-211ENST00000485363 PRMT6Q96LA8 375 aaPredicted RBP19.86■□□□□ 0.77
SIK3-211ENST00000485363 TTF2Q9UNY4 1162 aaKnown RBP19.86■□□□□ 0.77
SIK3-211ENST00000485363 PCDHAC2Q9Y5I4 1007 aa19.86■□□□□ 0.77
SIK3-211ENST00000485363 PPP2R3BQ9Y5P8 575 aa19.86■□□□□ 0.77
SIK3-211ENST00000485363 FRAT2O75474 233 aaPredicted RBP19.85■□□□□ 0.77
SIK3-211ENST00000485363 IFIT1P09914 478 aaKnown RBP19.85■□□□□ 0.77
SIK3-211ENST00000485363 PTPN12Q05209 780 aaKnown RBP19.85■□□□□ 0.77
SIK3-211ENST00000485363 ARMC9Q7Z3E5 817 aa19.85■□□□□ 0.77
SIK3-211ENST00000485363 SAGE1Q9NXZ1 904 aa19.85■□□□□ 0.77
SIK3-211ENST00000485363 SERPINA10Q9UK55 444 aa19.85■□□□□ 0.77
SIK3-211ENST00000485363 CASP8AP2Q9UKL3 1982 aa19.84■□□□□ 0.77
SIK3-211ENST00000485363 CLRN2A0PK11 232 aa19.84■□□□□ 0.77
SIK3-211ENST00000485363 DIEXFQ68CQ4 756 aaKnown RBP19.84■□□□□ 0.77
SIK3-211ENST00000485363 TBC1D22AQ8WUA7 517 aa19.84■□□□□ 0.77
SIK3-211ENST00000485363 CSRNP1Q96S65 589 aa19.84■□□□□ 0.77
SIK3-211ENST00000485363 IQSEC3Q9UPP2 1182 aaPredicted RBP19.84■□□□□ 0.77
SIK3-211ENST00000485363 FGFR2P21802 821 aa19.83■□□□□ 0.77
SIK3-211ENST00000485363 CHAF1AQ13111 956 aaPredicted RBP19.83■□□□□ 0.77
SIK3-211ENST00000485363 PRKG1Q13976 671 aa19.83■□□□□ 0.77
SIK3-211ENST00000485363 MIER1Q8N108 512 aa19.83■□□□□ 0.77
SIK3-211ENST00000485363 VEZTQ9HBM0 779 aa19.83■□□□□ 0.77
SIK3-211ENST00000485363 FBXO3Q9UK99 471 aa19.83■□□□□ 0.77
SIK3-211ENST00000485363 IPO8O15397 1037 aaKnown RBP19.82■□□□□ 0.76
SIK3-211ENST00000485363 SLC5A1P13866 664 aa19.82■□□□□ 0.76
SIK3-211ENST00000485363 BCAMP50895 628 aa19.82■□□□□ 0.76
SIK3-211ENST00000485363 INTS3Q68E01 1043 aaKnown RBP19.82■□□□□ 0.76
SIK3-211ENST00000485363 ATG9AQ7Z3C6 839 aa19.82■□□□□ 0.76
SIK3-211ENST00000485363 RNF186Q9NXI6 227 aa19.82■□□□□ 0.76
SIK3-211ENST00000485363 ANGEL1Q9UNK9 670 aaKnown RBP19.82■□□□□ 0.76
SIK3-211ENST00000485363 LRRFIP2Q9Y608 721 aaKnown RBP19.82■□□□□ 0.76
SIK3-211ENST00000485363 TRPA1O75762 1119 aa19.81■□□□□ 0.76
SIK3-211ENST00000485363 CIAO1O76071 339 aa19.81■□□□□ 0.76
SIK3-211ENST00000485363 SUPT20HL1Q3ZLR7 823 aa19.81■□□□□ 0.76
SIK3-211ENST00000485363 LPIN2Q92539 896 aa19.81■□□□□ 0.76
SIK3-211ENST00000485363 MEIS3Q99687 375 aa19.81■□□□□ 0.76
SIK3-211ENST00000485363 SIL1Q9H173 461 aa19.81■□□□□ 0.76
SIK3-211ENST00000485363 AOX1Q06278 1338 aa19.8■□□□□ 0.76
SIK3-211ENST00000485363 PPP1R12BO60237 982 aaPredicted RBP19.8■□□□□ 0.76
SIK3-211ENST00000485363 CRKP46108 304 aa19.8■□□□□ 0.76
SIK3-211ENST00000485363 TNFAIP1Q13829 316 aa19.8■□□□□ 0.76
SIK3-211ENST00000485363 SPDYE2Q495Y8 402 aa19.8■□□□□ 0.76
SIK3-211ENST00000485363 LDLRAD1Q5T700 205 aa19.8■□□□□ 0.76
SIK3-211ENST00000485363 DZIP1LQ8IYY4 767 aaKnown RBP19.8■□□□□ 0.76
SIK3-211ENST00000485363 ABHD8Q96I13 439 aa19.8■□□□□ 0.76
SIK3-211ENST00000485363 ZNF70Q9UC06 446 aaPredicted RBP19.8■□□□□ 0.76
SIK3-211ENST00000485363 MYH13Q9UKX3 1938 aa19.8■□□□□ 0.76
SIK3-211ENST00000485363 GNAI3P08754 354 aa19.79■□□□□ 0.76
SIK3-211ENST00000485363 HDLBPQ00341 1268 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms