RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 USP50Q70EL3 339 aaPredicted RBP9.71□□□□□ -0.86
MACF1-220ENST00000485063 LDHDQ86WU2 507 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 VPS37DQ86XT2 251 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 PANK1Q8TE04 598 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 DPF2Q92785 391 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 SIL1Q9H173 461 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 ADARB2Q9NS39 739 aaKnown RBP9.71□□□□□ -0.86
MACF1-220ENST00000485063 CEP126Q9P2H0 1117 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 CNOT7Q9UIV1 285 aaKnown RBP9.71□□□□□ -0.86
MACF1-220ENST00000485063 MYO3BQ8WXR4 1341 aa9.71□□□□□ -0.86
MACF1-220ENST00000485063 SCN9AQ15858 1988 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 POTEFA5A3E0 1075 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 WTIPA6NIX2 430 aaPredicted RBP9.7□□□□□ -0.86
MACF1-220ENST00000485063 ZBTB7BO15156 539 aaPredicted RBP9.7□□□□□ -0.86
MACF1-220ENST00000485063 FRAT2O75474 233 aaPredicted RBP9.7□□□□□ -0.86
MACF1-220ENST00000485063 RLBP1P12271 317 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 SLC5A1P13866 664 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 HIBADHP31937 336 aaKnown RBP9.7□□□□□ -0.86
MACF1-220ENST00000485063 EPS15P42566 896 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 PDE3AQ14432 1141 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 MVPQ14764 893 aaKnown RBP9.7□□□□□ -0.86
MACF1-220ENST00000485063 PUM3Q15397 648 aaKnown RBP9.7□□□□□ -0.86
MACF1-220ENST00000485063 STRIP1Q5VSL9 837 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 TTLL5Q6EMB2 1281 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
MACF1-220ENST00000485063 TXNRD3Q86VQ6 643 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 AGBL3Q8NEM8 1001 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 CD209Q9NNX6 404 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 COPRSQ9NQ92 184 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 KCNQ5Q9NR82 932 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 COG6Q9Y2V7 657 aa9.7□□□□□ -0.86
MACF1-220ENST00000485063 SNAP23O00161 211 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 GTF2IP78347 998 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 ATP8B2P98198 1209 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 G3BP1Q13283 466 aaKnown RBP eCLIP9.69□□□□□ -0.863e-7■□□□□ 10.9
MACF1-220ENST00000485063 MICALL2Q8IY33 904 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 OGFOD1Q8N543 542 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 LPIN2Q92539 896 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 HDAC9Q9UKV0 1011 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 MYH13Q9UKX3 1938 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 PA2G4Q9UQ80 394 aaKnown RBP9.69□□□□□ -0.86
MACF1-220ENST00000485063 AKAP2Q9Y2D5 859 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 PCDHB13Q9Y5F0 798 aa9.69□□□□□ -0.86
MACF1-220ENST00000485063 USP17L8P0C7I0 530 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 IL1R1P14778 569 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 HSPA6P17066 643 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 KLRK1P26718 216 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 MMP14P50281 582 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 OS9Q13438 667 aaPredicted RBP9.68□□□□□ -0.86
MACF1-220ENST00000485063 ATG9AQ7Z3C6 839 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 VGLL2Q8N8G2 317 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 FAM212AQ96EL1 285 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 C1orf115Q9H7X2 142 aa9.68□□□□□ -0.86
MACF1-220ENST00000485063 ZNF609O15014 1411 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 PNMA6EA0A0J9YXQ4 647 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 SASH1O94885 1247 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 SEC24BO95487 1268 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 GYG1P46976 350 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 APLP1P51693 650 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 ATP2B3Q16720 1220 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 DACT2Q5SW24 774 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 RBM26Q5T8P6 1007 aaKnown RBP9.67□□□□□ -0.86
MACF1-220ENST00000485063 ZC3H15Q8WU90 426 aaKnown RBP9.67□□□□□ -0.86
MACF1-220ENST00000485063 FAM84BQ96KN1 310 aaPredicted RBP9.67□□□□□ -0.86
MACF1-220ENST00000485063 GNL3LQ9NVN8 582 aaKnown RBP9.67□□□□□ -0.86
MACF1-220ENST00000485063 ADAMTSL1Q8N6G6 1762 aa9.67□□□□□ -0.86
MACF1-220ENST00000485063 IRS2Q9Y4H2 1338 aa9.66□□□□□ -0.86
MACF1-220ENST00000485063 HMMRO75330 724 aa9.66□□□□□ -0.86
MACF1-220ENST00000485063 SURF6O75683 361 aaKnown RBP9.66□□□□□ -0.86
MACF1-220ENST00000485063 FGFR2P21802 821 aa9.66□□□□□ -0.86
MACF1-220ENST00000485063 FKBP1AP62942 108 aaKnown RBP9.66□□□□□ -0.86
MACF1-220ENST00000485063 KIF4BQ2VIQ3 1234 aa9.66□□□□□ -0.86
MACF1-220ENST00000485063 TBC1D10BQ4KMP7 808 aaPredicted RBP9.66□□□□□ -0.86
MACF1-220ENST00000485063 MAP1SQ66K74 1059 aaPredicted RBP9.66□□□□□ -0.86
MACF1-220ENST00000485063 SAMD7Q7Z3H4 446 aa9.66□□□□□ -0.86
MACF1-220ENST00000485063 CDAN1Q8IWY9 1227 aa9.66□□□□□ -0.86
MACF1-220ENST00000485063 RPAP2Q8IXW5 612 aaPredicted RBP9.66□□□□□ -0.86
MACF1-220ENST00000485063 CNTROBQ8N137 903 aa9.66□□□□□ -0.86
MACF1-220ENST00000485063 TDRD7Q8NHU6 1098 aaKnown RBP9.66□□□□□ -0.86
MACF1-220ENST00000485063 SSH3Q8TE77 659 aa9.66□□□□□ -0.86
MACF1-220ENST00000485063 DCPSQ96C86 337 aaKnown RBP9.66□□□□□ -0.86
MACF1-220ENST00000485063 ZNF646O15015 1829 aaPredicted RBP9.66□□□□□ -0.86
MACF1-220ENST00000485063 ARAP2Q8WZ64 1704 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 BCAMP50895 628 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 RRP1P56182 461 aaKnown RBP9.65□□□□□ -0.86
MACF1-220ENST00000485063 TFCP2Q12800 502 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 HSP90AB4PQ58FF6 505 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 GORABQ5T7V8 394 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 CEP85Q6P2H3 762 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 FBXO33Q7Z6M2 555 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 KIAA0825Q8IV33 1275 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 TBC1D22AQ8WUA7 517 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 NEUROD6Q96NK8 337 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 MYOZ2Q9NPC6 264 aa9.65□□□□□ -0.86
MACF1-220ENST00000485063 TRPM7Q96QT4 1865 aa9.64□□□□□ -0.87
MACF1-220ENST00000485063 FAM205AQ6ZU69 1335 aa9.64□□□□□ -0.87
MACF1-220ENST00000485063 A0A1B0GUL7 405 aa9.64□□□□□ -0.87
MACF1-220ENST00000485063 SHTN1A0MZ66 631 aa9.64□□□□□ -0.87
MACF1-220ENST00000485063 ZNF280AP59817 542 aaPredicted RBP9.64□□□□□ -0.87
MACF1-220ENST00000485063 CHAF1AQ13111 956 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms