RNA–Protein interactions for RNA: ENST00000483536.6

NOVA1-205, Transcript of NOVA alternative splicing regulator 1, humanhuman

TSL 1 (best)

Gene NOVA1, Length 6,575 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-205ENST00000483536 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.77□□□□□ -1.01
NOVA1-205ENST00000483536 ETAA1Q9NY74 926 aa8.77□□□□□ -1.01
NOVA1-205ENST00000483536 GRXCR2A6NFK2 248 aa8.77□□□□□ -1.01
NOVA1-205ENST00000483536 MCCD1P59942 119 aaPredicted RBP8.77□□□□□ -1.01
NOVA1-205ENST00000483536 ATP2B2Q01814 1243 aa8.77□□□□□ -1.01
NOVA1-205ENST00000483536 SIL1Q9H173 461 aa8.77□□□□□ -1.01
NOVA1-205ENST00000483536 RHOBTB1O94844 696 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CHRM1P11229 460 aaPredicted RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 OAS2P29728 719 aaKnown RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CEP112Q8N8E3 955 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 ST13P5Q8NFI4 369 aaPredicted RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 FERMT2Q96AC1 680 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 SH3KBP1Q96B97 665 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CWC25Q9NXE8 425 aaPredicted RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 TFIP11Q9UBB9 837 aaKnown RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 RNASE9P60153 205 aaKnown RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 AP2B1P63010 937 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 HDLBPQ00341 1268 aaKnown RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 RAPGEF1Q13905 1077 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 DIXDC1Q155Q3 683 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 DIABLOQ9NR28 239 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CAPN9O14815 690 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 MAPK1P28482 360 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CCDC14Q49A88 953 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 C6orf163Q5TEZ5 329 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 HOOK2Q96ED9 719 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 KIFC3Q9BVG8 833 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 UTP14AQ9BVJ6 771 aaKnown RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 GNL3LQ9NVN8 582 aaKnown RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 WDR91A4D1P6 747 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CLUP10909 449 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 PIK3CAP42336 1068 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 SDF4Q9BRK5 362 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 SELENOOQ9BVL4 669 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CSRNP2Q9H175 543 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CHMP5Q9NZZ3 219 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 WBP11Q9Y2W2 641 aaKnown RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 LRRD1A4D1F6 860 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 ZNF189O75820 626 aaPredicted RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 KRT9P35527 623 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 PDE4DQ08499 809 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 INTS8Q75QN2 995 aaKnown RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 CTAGE6Q86UF2 777 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 STMN4Q9H169 189 aaPredicted RBP8.76□□□□□ -1.01
NOVA1-205ENST00000483536 PLCB1Q9NQ66 1216 aa8.76□□□□□ -1.01
NOVA1-205ENST00000483536 TOP1P11387 765 aaKnown RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 MCM5P33992 734 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 GEN1Q17RS7 908 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 GLYCTKQ8IVS8 523 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 SMARCC2Q8TAQ2 1214 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 SLC39A3Q9BRY0 314 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 IFT122Q9HBG6 1241 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 CHRAC1Q9NRG0 131 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 SYCE3A1L190 88 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 TRIM64CA6NLI5 447 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 TTLL13PA6NNM8 815 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 TIMM44O43615 452 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 ATPIF1Q9UII2 106 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 LSM1O15116 133 aaKnown RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 GUCY1B2O75343 617 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 POLGP54098 1239 aaPredicted RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 FKBP5Q13451 457 aaPredicted RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 MYRIPQ8NFW9 859 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 CCDC43Q96MW1 224 aaKnown RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 TBC1D2Q9BYX2 928 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 GBP3Q9H0R5 595 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 NEUROD4Q9HD90 331 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 SCAMP1O15126 338 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 SRLQ86TD4 932 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 CNDP2Q96KP4 475 aaKnown RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 SRPK1Q96SB4 655 aaKnown RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 FAM117AQ9C073 453 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 SCHIP1Q9P0W5 487 aaPredicted RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 THRAP3Q9Y2W1 955 aaKnown RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 ITGB3BPQ13352 177 aaPredicted RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 SNX1Q13596 522 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 TPD52L1Q16890 204 aaPredicted RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 TUBA3EQ6PEY2 450 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 ATP11CQ8NB49 1132 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 POLR3CQ9BUI4 534 aaPredicted RBP8.75□□□□□ -1.01
NOVA1-205ENST00000483536 AASDHPPTQ9NRN7 309 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 CEP131Q9UPN4 1083 aa8.75□□□□□ -1.01
NOVA1-205ENST00000483536 LUC7L3O95232 432 aaKnown RBP8.74□□□□□ -1.01
NOVA1-205ENST00000483536 MCM3P25205 808 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 GRAMD1BQ3KR37 738 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 ZWILCHQ9H900 591 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 REC8O95072 547 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 VPS41P49754 854 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 IFT74Q96LB3 600 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 ZNF396Q96N95 335 aaPredicted RBP8.74□□□□□ -1.01
NOVA1-205ENST00000483536 MED4Q9NPJ6 270 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 GBP1P32455 592 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 EVCP57679 992 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 TAF11Q15544 211 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 C11orf96Q7Z7L8 435 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 EDEM3Q9BZQ6 932 aa8.74□□□□□ -1.01
NOVA1-205ENST00000483536 BUB1BO60566 1050 aaPredicted RBP8.74□□□□□ -1.01
NOVA1-205ENST00000483536 SFPQP23246 707 aaKnown RBP eCLIP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms