RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CCNL1Q9UK58 526 aaPredicted RBP17.5■□□□□ 0.39
ATG4B-220ENST00000482507 LAMB4A4D0S4 1761 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 CCT2P78371 535 aaKnown RBP17.49■□□□□ 0.39
ATG4B-220ENST00000482507 ARID3AQ99856 593 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 TJP1Q07157 1748 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 PTPDC1A2A3K4 754 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 HSPD1P10809 573 aaKnown RBP17.49■□□□□ 0.39
ATG4B-220ENST00000482507 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.392e-8■■■■■ 34.1
ATG4B-220ENST00000482507 FGD1P98174 961 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 LRMPQ12912 555 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 CHST3Q7LGC8 479 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 PLA2G4DQ86XP0 818 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 TDRD7Q8NHU6 1098 aaKnown RBP17.49■□□□□ 0.39
ATG4B-220ENST00000482507 AGXT2Q9BYV1 514 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
ATG4B-220ENST00000482507 ZSCAN16Q9H4T2 348 aaPredicted RBP17.49■□□□□ 0.39
ATG4B-220ENST00000482507 HELLSQ9NRZ9 838 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 MAST3O60307 1309 aa17.49■□□□□ 0.39
ATG4B-220ENST00000482507 BRWD3Q6RI45 1802 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 CCDC186Q7Z3E2 898 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 LLPHQ9BRT6 129 aaKnown RBP17.48■□□□□ 0.39
ATG4B-220ENST00000482507 DSCC1Q9BVC3 393 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 GOLPH3LQ9H4A5 285 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 CWC25Q9NXE8 425 aaPredicted RBP17.48■□□□□ 0.39
ATG4B-220ENST00000482507 E7EWF7 191 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 TPM3P06753 285 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 ZNF75DP51815 510 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 TTLL5Q6EMB2 1281 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 LRRC4BQ9NT99 713 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 CCDC87Q9NVE4 849 aa17.48■□□□□ 0.39
ATG4B-220ENST00000482507 M0R2C6 588 aa17.47■□□□□ 0.39
ATG4B-220ENST00000482507 ZNF165P49910 485 aa17.47■□□□□ 0.39
ATG4B-220ENST00000482507 SALL1Q9NSC2 1324 aa17.47■□□□□ 0.39
ATG4B-220ENST00000482507 NUP188Q5SRE5 1749 aa17.47■□□□□ 0.39
ATG4B-220ENST00000482507 HLFQ16534 295 aa17.47■□□□□ 0.39
ATG4B-220ENST00000482507 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-220ENST00000482507 USP28Q96RU2 1077 aa17.47■□□□□ 0.39
ATG4B-220ENST00000482507 GPR108Q9NPR9 543 aa17.47■□□□□ 0.39
ATG4B-220ENST00000482507 GPHNQ9NQX3 736 aaPredicted RBP17.47■□□□□ 0.39
ATG4B-220ENST00000482507 A0A087WWV3 80 aa17.46■□□□□ 0.39
ATG4B-220ENST00000482507 GOLGA6L6A8MZA4 724 aa17.46■□□□□ 0.39
ATG4B-220ENST00000482507 EYA2O00167 538 aa17.46■□□□□ 0.39
ATG4B-220ENST00000482507 HMGB1P09429 215 aaKnown RBP17.46■□□□□ 0.39
ATG4B-220ENST00000482507 IL15P40933 162 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-220ENST00000482507 C11orf57Q6ZUT1 292 aaPredicted RBP17.46■□□□□ 0.39
ATG4B-220ENST00000482507 RCOR1Q9UKL0 485 aa17.46■□□□□ 0.39
ATG4B-220ENST00000482507 CFAP45Q9UL16 551 aa17.46■□□□□ 0.39
ATG4B-220ENST00000482507 A0A1B0GUL7 405 aa17.46■□□□□ 0.38
ATG4B-220ENST00000482507 FOXP2O15409 715 aa17.46■□□□□ 0.38
ATG4B-220ENST00000482507 GUCY1B3Q02153 619 aa17.46■□□□□ 0.38
ATG4B-220ENST00000482507 TRIM5Q9C035 493 aa17.46■□□□□ 0.38
ATG4B-220ENST00000482507 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.45■□□□□ 0.38
ATG4B-220ENST00000482507 IFIT1P09914 478 aaKnown RBP17.45■□□□□ 0.38
ATG4B-220ENST00000482507 PDIA3P30101 505 aaKnown RBP17.45■□□□□ 0.38
ATG4B-220ENST00000482507 SNW1Q13573 536 aaKnown RBP17.45■□□□□ 0.38
ATG4B-220ENST00000482507 AMIGO3Q86WK7 504 aa17.45■□□□□ 0.38
ATG4B-220ENST00000482507 OSBP2Q969R2 916 aa17.45■□□□□ 0.38
ATG4B-220ENST00000482507 ZMYND15Q9H091 742 aa17.45■□□□□ 0.38
ATG4B-220ENST00000482507 RNF113AO15541 343 aaKnown RBP17.45■□□□□ 0.38
ATG4B-220ENST00000482507 APBA3O96018 575 aa17.45■□□□□ 0.38
ATG4B-220ENST00000482507 IQCB1Q15051 598 aa17.45■□□□□ 0.38
ATG4B-220ENST00000482507 CCAR1Q8IX12 1150 aaKnown RBP17.45■□□□□ 0.38
ATG4B-220ENST00000482507 EIF5P55010 431 aaKnown RBP17.44■□□□□ 0.38
ATG4B-220ENST00000482507 CCDC144BQ3MJ40 725 aa17.44■□□□□ 0.38
ATG4B-220ENST00000482507 CCDC144CPQ8IYA2 1237 aa17.44■□□□□ 0.38
ATG4B-220ENST00000482507 PROM2Q8N271 834 aa17.44■□□□□ 0.38
ATG4B-220ENST00000482507 MYH15Q9Y2K3 1946 aa17.44■□□□□ 0.38
ATG4B-220ENST00000482507 FDPSP14324 419 aaKnown RBP17.43■□□□□ 0.38
ATG4B-220ENST00000482507 IL6STP40189 918 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-220ENST00000482507 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
ATG4B-220ENST00000482507 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
ATG4B-220ENST00000482507 RIOK3O14730 519 aaKnown RBP17.43■□□□□ 0.38
ATG4B-220ENST00000482507 BTAF1O14981 1849 aa17.43■□□□□ 0.38
ATG4B-220ENST00000482507 ADORA1P30542 326 aa17.43■□□□□ 0.38
ATG4B-220ENST00000482507 ZSCAN25Q6NSZ9 544 aa17.43■□□□□ 0.38
ATG4B-220ENST00000482507 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
ATG4B-220ENST00000482507 DRC7Q8IY82 874 aa17.43■□□□□ 0.38
ATG4B-220ENST00000482507 GPTP24298 496 aa17.42■□□□□ 0.38
ATG4B-220ENST00000482507 MTERF4Q7Z6M4 381 aaKnown RBP17.42■□□□□ 0.38
ATG4B-220ENST00000482507 CCDC191Q8NCU4 936 aa17.42■□□□□ 0.38
ATG4B-220ENST00000482507 ENGASEQ8NFI3 743 aa17.42■□□□□ 0.38
ATG4B-220ENST00000482507 BCL2L12Q9HB09 334 aa17.42■□□□□ 0.38
ATG4B-220ENST00000482507 KIF3AQ9Y496 699 aa17.42■□□□□ 0.38
ATG4B-220ENST00000482507 GNPATO15228 680 aa17.41■□□□□ 0.38
ATG4B-220ENST00000482507 SCARF1Q14162 830 aa17.41■□□□□ 0.38
ATG4B-220ENST00000482507 CACTINQ8WUQ7 758 aaKnown RBP17.41■□□□□ 0.38
ATG4B-220ENST00000482507 ERCC4Q92889 916 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-220ENST00000482507 ZNF274Q96GC6 653 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-220ENST00000482507 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
ATG4B-220ENST00000482507 CIAO1O76071 339 aa17.41■□□□□ 0.38
ATG4B-220ENST00000482507 HAND2P61296 217 aa17.41■□□□□ 0.38
ATG4B-220ENST00000482507 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
ATG4B-220ENST00000482507 OTUD7BQ6GQQ9 843 aa17.41■□□□□ 0.38
ATG4B-220ENST00000482507 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.41■□□□□ 0.38
ATG4B-220ENST00000482507 NHSQ6T4R5 1651 aa17.41■□□□□ 0.38
ATG4B-220ENST00000482507 MAP3K15Q6ZN16 1313 aa17.4■□□□□ 0.38
ATG4B-220ENST00000482507 HSP90AB3PQ58FF7 597 aa17.4■□□□□ 0.38
ATG4B-220ENST00000482507 CLIP2Q9UDT6 1046 aa17.4■□□□□ 0.38
ATG4B-220ENST00000482507 ARID5BQ14865 1188 aa17.4■□□□□ 0.38
ATG4B-220ENST00000482507 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms