RNA–Protein interactions for RNA: ENST00000482478.5

COL16A1-212, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 797 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-212ENST00000482478 FOXN1O15353 648 aa19.59■□□□□ 0.73
COL16A1-212ENST00000482478 TRIM27P14373 513 aa19.59■□□□□ 0.73
COL16A1-212ENST00000482478 PUM3Q15397 648 aaKnown RBP19.59■□□□□ 0.73
COL16A1-212ENST00000482478 ARHGAP45Q92619 1136 aa19.59■□□□□ 0.73
COL16A1-212ENST00000482478 BEGAINQ9BUH8 593 aa19.59■□□□□ 0.73
COL16A1-212ENST00000482478 SIL1Q9H173 461 aa19.59■□□□□ 0.73
COL16A1-212ENST00000482478 EYA2O00167 538 aa19.58■□□□□ 0.72
COL16A1-212ENST00000482478 AOC2O75106 756 aa19.58■□□□□ 0.72
COL16A1-212ENST00000482478 FRAT2O75474 233 aaPredicted RBP19.58■□□□□ 0.72
COL16A1-212ENST00000482478 BCAR3O75815 825 aa19.58■□□□□ 0.72
COL16A1-212ENST00000482478 MMP14P50281 582 aa19.58■□□□□ 0.72
COL16A1-212ENST00000482478 CAVIN4Q5BKX8 364 aa19.58■□□□□ 0.72
COL16A1-212ENST00000482478 MFSD14BQ5SR56 506 aa19.58■□□□□ 0.72
COL16A1-212ENST00000482478 COL13A1Q5TAT6 717 aaPredicted RBP19.58■□□□□ 0.72
COL16A1-212ENST00000482478 APOBEC3FQ8IUX4 373 aaKnown RBP19.58■□□□□ 0.72
COL16A1-212ENST00000482478 HHIPL1Q96JK4 782 aa19.58■□□□□ 0.72
COL16A1-212ENST00000482478 COL1A1P02452 1464 aaPredicted RBP19.57■□□□□ 0.72
COL16A1-212ENST00000482478 PDE8BO95263 885 aa19.57■□□□□ 0.72
COL16A1-212ENST00000482478 IFIT1P09914 478 aaKnown RBP19.57■□□□□ 0.72
COL16A1-212ENST00000482478 CTCFP49711 727 aaPredicted RBP19.57■□□□□ 0.72
COL16A1-212ENST00000482478 CHAF1AQ13111 956 aaPredicted RBP19.57■□□□□ 0.72
COL16A1-212ENST00000482478 DLGAP5Q15398 846 aa19.57■□□□□ 0.72
COL16A1-212ENST00000482478 ATF7IPQ6VMQ6 1270 aa19.57■□□□□ 0.72
COL16A1-212ENST00000482478 VGLL2Q8N8G2 317 aa19.57■□□□□ 0.72
COL16A1-212ENST00000482478 CLUAP1Q96AJ1 413 aa19.57■□□□□ 0.72
COL16A1-212ENST00000482478 IQSEC3Q9UPP2 1182 aaPredicted RBP19.57■□□□□ 0.72
COL16A1-212ENST00000482478 POLR2AP24928 1970 aaKnown RBP19.57■□□□□ 0.72
COL16A1-212ENST00000482478 ECM29Q5VYK3 1845 aa19.56■□□□□ 0.72
COL16A1-212ENST00000482478 SLC5A1P13866 664 aa19.56■□□□□ 0.72
COL16A1-212ENST00000482478 NF2P35240 595 aa19.56■□□□□ 0.72
COL16A1-212ENST00000482478 RFX5P48382 616 aaPredicted RBP19.56■□□□□ 0.72
COL16A1-212ENST00000482478 RBM5P52756 815 aaKnown RBP eCLIP19.56■□□□□ 0.72
COL16A1-212ENST00000482478 FKBP1AP62942 108 aaKnown RBP19.56■□□□□ 0.72
COL16A1-212ENST00000482478 TTLL12Q14166 644 aaPredicted RBP19.56■□□□□ 0.72
COL16A1-212ENST00000482478 FTSJ3Q8IY81 847 aaKnown RBP19.56■□□□□ 0.72
COL16A1-212ENST00000482478 FAM84BQ96KN1 310 aaPredicted RBP19.56■□□□□ 0.72
COL16A1-212ENST00000482478 WBP1LQ9NX94 342 aa19.56■□□□□ 0.72
COL16A1-212ENST00000482478 MYO1BO43795 1136 aa19.55■□□□□ 0.72
COL16A1-212ENST00000482478 GNAI3P08754 354 aa19.55■□□□□ 0.72
COL16A1-212ENST00000482478 PTPN12Q05209 780 aaKnown RBP19.55■□□□□ 0.72
COL16A1-212ENST00000482478 CFAP100Q494V2 611 aa19.55■□□□□ 0.72
COL16A1-212ENST00000482478 ZKSCAN2Q63HK3 967 aa19.55■□□□□ 0.72
COL16A1-212ENST00000482478 INTS3Q68E01 1043 aaKnown RBP19.55■□□□□ 0.72
COL16A1-212ENST00000482478 RGMBQ6NW40 437 aa19.55■□□□□ 0.72
COL16A1-212ENST00000482478 TDRD7Q8NHU6 1098 aaKnown RBP19.55■□□□□ 0.72
COL16A1-212ENST00000482478 VEZTQ9HBM0 779 aa19.55■□□□□ 0.72
COL16A1-212ENST00000482478 TNNQ9UQP3 1299 aa19.55■□□□□ 0.72
COL16A1-212ENST00000482478 MYH13Q9UKX3 1938 aa19.55■□□□□ 0.72
COL16A1-212ENST00000482478 FAM205AQ6ZU69 1335 aa19.54■□□□□ 0.72
COL16A1-212ENST00000482478 ZNF157P51786 506 aaPredicted RBP19.54■□□□□ 0.72
COL16A1-212ENST00000482478 NOGQ13253 232 aa19.54■□□□□ 0.72
COL16A1-212ENST00000482478 TNS4Q8IZW8 715 aa19.54■□□□□ 0.72
COL16A1-212ENST00000482478 TTF2Q9UNY4 1162 aaKnown RBP19.54■□□□□ 0.72
COL16A1-212ENST00000482478 CLRN2A0PK11 232 aa19.53■□□□□ 0.72
COL16A1-212ENST00000482478 MAP2K2P36507 400 aa19.53■□□□□ 0.72
COL16A1-212ENST00000482478 IFFO2Q5TF58 517 aa19.53■□□□□ 0.72
COL16A1-212ENST00000482478 PRAMEF18Q5VWM3 479 aa19.53■□□□□ 0.72
COL16A1-212ENST00000482478 PA2G4Q9UQ80 394 aaKnown RBP19.53■□□□□ 0.72
COL16A1-212ENST00000482478 PCDHAC2Q9Y5I4 1007 aa19.53■□□□□ 0.72
COL16A1-212ENST00000482478 SPDYE2BA6NHP3 402 aa19.52■□□□□ 0.72
COL16A1-212ENST00000482478 SRGAP3O43295 1099 aa19.52■□□□□ 0.72
COL16A1-212ENST00000482478 CIAO1O76071 339 aa19.52■□□□□ 0.72
COL16A1-212ENST00000482478 SPDYE6P0CI01 402 aa19.52■□□□□ 0.72
COL16A1-212ENST00000482478 FKBP1BP68106 108 aa19.52■□□□□ 0.72
COL16A1-212ENST00000482478 ATP2B3Q16720 1220 aa19.52■□□□□ 0.72
COL16A1-212ENST00000482478 LPIN2Q92539 896 aa19.52■□□□□ 0.72
COL16A1-212ENST00000482478 HSPA8P11142 646 aaKnown RBP19.51■□□□□ 0.71
COL16A1-212ENST00000482478 BCAMP50895 628 aa19.51■□□□□ 0.71
COL16A1-212ENST00000482478 LBX1P52954 281 aa19.51■□□□□ 0.71
COL16A1-212ENST00000482478 ATG9AQ7Z3C6 839 aa19.51■□□□□ 0.71
COL16A1-212ENST00000482478 FBXO33Q7Z6M2 555 aa19.51■□□□□ 0.71
COL16A1-212ENST00000482478 TBC1D22AQ8WUA7 517 aa19.51■□□□□ 0.71
COL16A1-212ENST00000482478 ZBED3Q96IU2 234 aaPredicted RBP19.51■□□□□ 0.71
COL16A1-212ENST00000482478 FBXO3Q9UK99 471 aa19.51■□□□□ 0.71
COL16A1-212ENST00000482478 SLC10A3P09131 477 aa19.5■□□□□ 0.71
COL16A1-212ENST00000482478 FGFR2P21802 821 aa19.5■□□□□ 0.71
COL16A1-212ENST00000482478 IL15P40933 162 aaPredicted RBP19.5■□□□□ 0.71
COL16A1-212ENST00000482478 TMEM57Q8N5G2 664 aa19.5■□□□□ 0.71
COL16A1-212ENST00000482478 MTMR14Q8NCE2 650 aa19.5■□□□□ 0.71
COL16A1-212ENST00000482478 CCDC102AQ96A19 550 aa19.5■□□□□ 0.71
COL16A1-212ENST00000482478 CEP126Q9P2H0 1117 aa19.5■□□□□ 0.71
COL16A1-212ENST00000482478 TSKSQ9UJT2 592 aa19.5■□□□□ 0.71
COL16A1-212ENST00000482478 GNAI2P04899 355 aa19.49■□□□□ 0.71
COL16A1-212ENST00000482478 PRKG1Q13976 671 aa19.49■□□□□ 0.71
COL16A1-212ENST00000482478 MOB2Q70IA6 237 aa19.49■□□□□ 0.71
COL16A1-212ENST00000482478 RASAL3Q86YV0 1011 aa19.49■□□□□ 0.71
COL16A1-212ENST00000482478 ITPRIPQ8IWB1 547 aa19.49■□□□□ 0.71
COL16A1-212ENST00000482478 SERPINA10Q9UK55 444 aa19.49■□□□□ 0.71
COL16A1-212ENST00000482478 DEFB129Q9H1M3 183 aa19.48■□□□□ 0.71
COL16A1-212ENST00000482478 COPRSQ9NQ92 184 aa19.48■□□□□ 0.71
COL16A1-212ENST00000482478 PRDM10Q9NQV6 1147 aa19.48■□□□□ 0.71
COL16A1-212ENST00000482478 PPP2R3BQ9Y5P8 575 aa19.48■□□□□ 0.71
COL16A1-212ENST00000482478 MAST3O60307 1309 aa19.48■□□□□ 0.71
COL16A1-212ENST00000482478 FAM155AB1AL88 458 aaPredicted RBP19.47■□□□□ 0.71
COL16A1-212ENST00000482478 CA12O43570 354 aa19.47■□□□□ 0.71
COL16A1-212ENST00000482478 CRKP46108 304 aa19.47■□□□□ 0.71
COL16A1-212ENST00000482478 TNFAIP1Q13829 316 aa19.47■□□□□ 0.71
COL16A1-212ENST00000482478 ARMC9Q7Z3E5 817 aa19.47■□□□□ 0.71
COL16A1-212ENST00000482478 GNL3LQ9NVN8 582 aaKnown RBP19.47■□□□□ 0.71
COL16A1-212ENST00000482478 SSC5DA1L4H1 1573 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms