RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 APOBEC3FQ8IUX4 373 aaKnown RBP24.86■■□□□ 1.57
MSH5-215ENST00000482280 FRAT1Q92837 279 aaPredicted RBP24.86■■□□□ 1.57
MSH5-215ENST00000482280 IRS2Q9Y4H2 1338 aa24.86■■□□□ 1.57
MSH5-215ENST00000482280 GYG1P46976 350 aa24.85■■□□□ 1.57
MSH5-215ENST00000482280 NOGQ13253 232 aa24.85■■□□□ 1.57
MSH5-215ENST00000482280 LRRC24Q50LG9 513 aa24.85■■□□□ 1.57
MSH5-215ENST00000482280 RGMBQ6NW40 437 aa24.85■■□□□ 1.57
MSH5-215ENST00000482280 CCDC102AQ96A19 550 aa24.85■■□□□ 1.57
MSH5-215ENST00000482280 AOC2O75106 756 aa24.84■■□□□ 1.57
MSH5-215ENST00000482280 PDE8BO95263 885 aa24.84■■□□□ 1.57
MSH5-215ENST00000482280 IFIT1P09914 478 aaKnown RBP24.84■■□□□ 1.57
MSH5-215ENST00000482280 ZNF157P51786 506 aaPredicted RBP24.84■■□□□ 1.57
MSH5-215ENST00000482280 RBM5P52756 815 aaKnown RBP eCLIP24.84■■□□□ 1.57
MSH5-215ENST00000482280 FKBP1BP68106 108 aa24.84■■□□□ 1.57
MSH5-215ENST00000482280 TTLL12Q14166 644 aaPredicted RBP24.84■■□□□ 1.57
MSH5-215ENST00000482280 KLHDC4Q8TBB5 520 aa24.84■■□□□ 1.57
MSH5-215ENST00000482280 JAG2Q9Y219 1238 aa24.84■■□□□ 1.57
MSH5-215ENST00000482280 PUM3Q15397 648 aaKnown RBP24.83■■□□□ 1.57
MSH5-215ENST00000482280 PRDM10Q9NQV6 1147 aa24.83■■□□□ 1.57
MSH5-215ENST00000482280 GNAI3P08754 354 aa24.82■■□□□ 1.56
MSH5-215ENST00000482280 MFSD14BQ5SR56 506 aa24.82■■□□□ 1.56
MSH5-215ENST00000482280 TDRD7Q8NHU6 1098 aaKnown RBP24.82■■□□□ 1.56
MSH5-215ENST00000482280 FAM84BQ96KN1 310 aaPredicted RBP24.82■■□□□ 1.56
MSH5-215ENST00000482280 A0A1B0GUL6 1792 aa24.82■■□□□ 1.56
MSH5-215ENST00000482280 EYA2O00167 538 aa24.81■■□□□ 1.56
MSH5-215ENST00000482280 CA12O43570 354 aa24.81■■□□□ 1.56
MSH5-215ENST00000482280 CERS5Q8N5B7 392 aa24.81■■□□□ 1.56
MSH5-215ENST00000482280 LRRFIP2Q9Y608 721 aaKnown RBP24.81■■□□□ 1.56
MSH5-215ENST00000482280 SLC5A1P13866 664 aa24.8■■□□□ 1.56
MSH5-215ENST00000482280 LBX1P52954 281 aa24.8■■□□□ 1.56
MSH5-215ENST00000482280 FBXO3Q9UK99 471 aa24.8■■□□□ 1.56
MSH5-215ENST00000482280 SCAF8Q9UPN6 1271 aaKnown RBP24.8■■□□□ 1.56
MSH5-215ENST00000482280 FAM205AQ6ZU69 1335 aa24.8■■□□□ 1.56
MSH5-215ENST00000482280 CHAF1AQ13111 956 aaPredicted RBP24.79■■□□□ 1.56
MSH5-215ENST00000482280 CFAP100Q494V2 611 aa24.79■■□□□ 1.56
MSH5-215ENST00000482280 INTS3Q68E01 1043 aaKnown RBP24.79■■□□□ 1.56
MSH5-215ENST00000482280 ATF7IPQ6VMQ6 1270 aa24.79■■□□□ 1.56
MSH5-215ENST00000482280 TBC1D22AQ8WUA7 517 aa24.79■■□□□ 1.56
MSH5-215ENST00000482280 SIL1Q9H173 461 aa24.79■■□□□ 1.56
MSH5-215ENST00000482280 MTMR14Q8NCE2 650 aa24.78■■□□□ 1.56
MSH5-215ENST00000482280 CEP126Q9P2H0 1117 aa24.78■■□□□ 1.56
MSH5-215ENST00000482280 TTF2Q9UNY4 1162 aaKnown RBP24.78■■□□□ 1.56
MSH5-215ENST00000482280 POLR2AP24928 1970 aaKnown RBP24.77■■□□□ 1.56
MSH5-215ENST00000482280 THSD7BQ9C0I4 1608 aa24.77■■□□□ 1.56
MSH5-215ENST00000482280 PTPN12Q05209 780 aaKnown RBP24.77■■□□□ 1.56
MSH5-215ENST00000482280 PRAMEF18Q5VWM3 479 aa24.77■■□□□ 1.56
MSH5-215ENST00000482280 FBXO33Q7Z6M2 555 aa24.77■■□□□ 1.56
MSH5-215ENST00000482280 VGLL2Q8N8G2 317 aa24.77■■□□□ 1.56
MSH5-215ENST00000482280 LPIN2Q92539 896 aa24.77■■□□□ 1.56
MSH5-215ENST00000482280 MEIS3Q99687 375 aa24.77■■□□□ 1.56
MSH5-215ENST00000482280 IQSEC3Q9UPP2 1182 aaPredicted RBP24.77■■□□□ 1.56
MSH5-215ENST00000482280 BCAR3O75815 825 aa24.76■■□□□ 1.55
MSH5-215ENST00000482280 CIAO1O76071 339 aa24.76■■□□□ 1.55
MSH5-215ENST00000482280 HSPA8P11142 646 aaKnown RBP24.76■■□□□ 1.55
MSH5-215ENST00000482280 ZKSCAN2Q63HK3 967 aa24.76■■□□□ 1.55
MSH5-215ENST00000482280 ARMC9Q7Z3E5 817 aa24.76■■□□□ 1.55
MSH5-215ENST00000482280 VEZTQ9HBM0 779 aa24.76■■□□□ 1.55
MSH5-215ENST00000482280 SPDYE2BA6NHP3 402 aa24.75■■□□□ 1.55
MSH5-215ENST00000482280 SPDYE6P0CI01 402 aa24.75■■□□□ 1.55
MSH5-215ENST00000482280 TRIM27P14373 513 aa24.75■■□□□ 1.55
MSH5-215ENST00000482280 RFX5P48382 616 aaPredicted RBP24.75■■□□□ 1.55
MSH5-215ENST00000482280 CLUAP1Q96AJ1 413 aa24.75■■□□□ 1.55
MSH5-215ENST00000482280 ZBED3Q96IU2 234 aaPredicted RBP24.75■■□□□ 1.55
MSH5-215ENST00000482280 SERPINA10Q9UK55 444 aa24.75■■□□□ 1.55
MSH5-215ENST00000482280 PPP2R3BQ9Y5P8 575 aa24.75■■□□□ 1.55
MSH5-215ENST00000482280 ZNF646O15015 1829 aaPredicted RBP24.75■■□□□ 1.55
MSH5-215ENST00000482280 CLRN2A0PK11 232 aa24.74■■□□□ 1.55
MSH5-215ENST00000482280 IL15P40933 162 aaPredicted RBP24.74■■□□□ 1.55
MSH5-215ENST00000482280 TNFAIP1Q13829 316 aa24.74■■□□□ 1.55
MSH5-215ENST00000482280 DEFB129Q9H1M3 183 aa24.74■■□□□ 1.55
MSH5-215ENST00000482280 GNL3LQ9NVN8 582 aaKnown RBP24.74■■□□□ 1.55
MSH5-215ENST00000482280 COL1A1P02452 1464 aaPredicted RBP24.74■■□□□ 1.55
MSH5-215ENST00000482280 PAPPA2Q9BXP8 1791 aa24.74■■□□□ 1.55
MSH5-215ENST00000482280 BCAMP50895 628 aa24.73■■□□□ 1.55
MSH5-215ENST00000482280 FTSJ3Q8IY81 847 aaKnown RBP24.73■■□□□ 1.55
MSH5-215ENST00000482280 PCNTO95613 3336 aa24.73■■□□□ 1.55
MSH5-215ENST00000482280 MAST3O60307 1309 aa24.72■■□□□ 1.55
MSH5-215ENST00000482280 ZBED9Q6R2W3 1325 aa24.72■■□□□ 1.55
MSH5-215ENST00000482280 UBE2Q2LH0YL09 131 aa24.72■■□□□ 1.55
MSH5-215ENST00000482280 SRGAP3O43295 1099 aa24.72■■□□□ 1.55
MSH5-215ENST00000482280 SLC10A3P09131 477 aa24.72■■□□□ 1.55
MSH5-215ENST00000482280 ATP2B3Q16720 1220 aa24.72■■□□□ 1.55
MSH5-215ENST00000482280 SUPT20HL1Q3ZLR7 823 aa24.72■■□□□ 1.55
MSH5-215ENST00000482280 REM2Q8IYK8 340 aaPredicted RBP24.72■■□□□ 1.55
MSH5-215ENST00000482280 PRMT6Q96LA8 375 aaPredicted RBP24.72■■□□□ 1.55
MSH5-215ENST00000482280 GNAI2P04899 355 aa24.71■■□□□ 1.55
MSH5-215ENST00000482280 FGFR2P21802 821 aa24.71■■□□□ 1.55
MSH5-215ENST00000482280 KIF23Q02241 960 aaPredicted RBP24.71■■□□□ 1.55
MSH5-215ENST00000482280 PRKG1Q13976 671 aa24.71■■□□□ 1.55
MSH5-215ENST00000482280 FAM155AB1AL88 458 aaPredicted RBP24.7■■□□□ 1.54
MSH5-215ENST00000482280 PPP1R12BO60237 982 aaPredicted RBP24.7■■□□□ 1.54
MSH5-215ENST00000482280 CAPN15O75808 1086 aa24.7■■□□□ 1.54
MSH5-215ENST00000482280 ATG9AQ7Z3C6 839 aa24.7■■□□□ 1.54
MSH5-215ENST00000482280 COPRSQ9NQ92 184 aa24.7■■□□□ 1.54
MSH5-215ENST00000482280 TSKSQ9UJT2 592 aa24.7■■□□□ 1.54
MSH5-215ENST00000482280 CRKP46108 304 aa24.69■■□□□ 1.54
MSH5-215ENST00000482280 TNNI2P48788 182 aa24.69■■□□□ 1.54
MSH5-215ENST00000482280 MOB2Q70IA6 237 aa24.69■■□□□ 1.54
MSH5-215ENST00000482280 WDR66Q8TBY9 1149 aa24.69■■□□□ 1.54
MSH5-215ENST00000482280 TEKT1Q969V4 418 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms