RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 ZBED3Q96IU2 234 aaPredicted RBP29.53■■■□□ 2.32
TTC3-217ENST00000481605 JAG2Q9Y219 1238 aa29.53■■■□□ 2.32
TTC3-217ENST00000481605 PAPPA2Q9BXP8 1791 aa29.52■■■□□ 2.32
TTC3-217ENST00000481605 MROH5Q6ZUA9 1318 aa29.52■■■□□ 2.32
TTC3-217ENST00000481605 F8W031 263 aaPredicted RBP29.51■■■□□ 2.32
TTC3-217ENST00000481605 SLC10A3P09131 477 aa29.51■■■□□ 2.32
TTC3-217ENST00000481605 DLGAP5Q15398 846 aa29.51■■■□□ 2.32
TTC3-217ENST00000481605 CT47B1P0C2W7 299 aaPredicted RBP29.5■■■□□ 2.31
TTC3-217ENST00000481605 GYG1P46976 350 aa29.5■■■□□ 2.31
TTC3-217ENST00000481605 FKBP1AP62942 108 aaKnown RBP29.5■■■□□ 2.31
TTC3-217ENST00000481605 KIF23Q02241 960 aaPredicted RBP29.5■■■□□ 2.31
TTC3-217ENST00000481605 MOB2Q70IA6 237 aa29.5■■■□□ 2.31
TTC3-217ENST00000481605 APOBEC3FQ8IUX4 373 aaKnown RBP29.5■■■□□ 2.31
TTC3-217ENST00000481605 LRRC24Q50LG9 513 aa29.5■■■□□ 2.31
TTC3-217ENST00000481605 HIBADHP31937 336 aaKnown RBP29.49■■■□□ 2.31
TTC3-217ENST00000481605 FAM84BQ96KN1 310 aaPredicted RBP29.49■■■□□ 2.31
TTC3-217ENST00000481605 NF2P35240 595 aa29.48■■■□□ 2.31
TTC3-217ENST00000481605 RASAL3Q86YV0 1011 aa29.48■■■□□ 2.31
TTC3-217ENST00000481605 MTMR14Q8NCE2 650 aa29.48■■■□□ 2.31
TTC3-217ENST00000481605 TDRD7Q8NHU6 1098 aaKnown RBP29.48■■■□□ 2.31
TTC3-217ENST00000481605 UBE2Q2LH0YL09 131 aa29.47■■■□□ 2.31
TTC3-217ENST00000481605 TTLL12Q14166 644 aaPredicted RBP29.47■■■□□ 2.31
TTC3-217ENST00000481605 METTL24Q5JXM2 366 aa29.47■■■□□ 2.31
TTC3-217ENST00000481605 KLHDC4Q8TBB5 520 aa29.47■■■□□ 2.31
TTC3-217ENST00000481605 PCDHAC2Q9Y5I4 1007 aa29.47■■■□□ 2.31
TTC3-217ENST00000481605 FAM205AQ6ZU69 1335 aa29.47■■■□□ 2.31
TTC3-217ENST00000481605 CFAP100Q494V2 611 aa29.46■■■□□ 2.31
TTC3-217ENST00000481605 NOB1Q9ULX3 412 aaKnown RBP29.46■■■□□ 2.31
TTC3-217ENST00000481605 MFSD14BQ5SR56 506 aa29.44■■■□□ 2.3
TTC3-217ENST00000481605 VGLL2Q8N8G2 317 aa29.44■■■□□ 2.3
TTC3-217ENST00000481605 CSRNP1Q96S65 589 aa29.44■■■□□ 2.3
TTC3-217ENST00000481605 SPDYE2BA6NHP3 402 aa29.43■■■□□ 2.3
TTC3-217ENST00000481605 MYO1BO43795 1136 aa29.43■■■□□ 2.3
TTC3-217ENST00000481605 PDE8BO95263 885 aa29.43■■■□□ 2.3
TTC3-217ENST00000481605 SPDYE6P0CI01 402 aa29.43■■■□□ 2.3
TTC3-217ENST00000481605 VPS37DQ86XT2 251 aa29.43■■■□□ 2.3
TTC3-217ENST00000481605 PRMT6Q96LA8 375 aaPredicted RBP29.43■■■□□ 2.3
TTC3-217ENST00000481605 DEFB129Q9H1M3 183 aa29.43■■■□□ 2.3
TTC3-217ENST00000481605 RBM5P52756 815 aaKnown RBP eCLIP29.42■■■□□ 2.38e-6■■□□□ 11.9
TTC3-217ENST00000481605 FBXO33Q7Z6M2 555 aa29.42■■■□□ 2.3
TTC3-217ENST00000481605 SAGE1Q9NXZ1 904 aa29.42■■■□□ 2.3
TTC3-217ENST00000481605 CLRN2A0PK11 232 aa29.41■■■□□ 2.3
TTC3-217ENST00000481605 PRKG1Q13976 671 aa29.41■■■□□ 2.3
TTC3-217ENST00000481605 ABHD8Q96I13 439 aa29.41■■■□□ 2.3
TTC3-217ENST00000481605 API5Q9BZZ5 524 aaKnown RBP29.41■■■□□ 2.3
TTC3-217ENST00000481605 COL1A1P02452 1464 aaPredicted RBP29.41■■■□□ 2.3
TTC3-217ENST00000481605 CAVIN4Q5BKX8 364 aa29.4■■■□□ 2.3
TTC3-217ENST00000481605 RNF186Q9NXI6 227 aa29.4■■■□□ 2.3
TTC3-217ENST00000481605 TRPA1O75762 1119 aa29.4■■■□□ 2.3
TTC3-217ENST00000481605 UBTFL1P0CB47 393 aaPredicted RBP29.4■■■□□ 2.3
TTC3-217ENST00000481605 RFX5P48382 616 aaPredicted RBP29.4■■■□□ 2.3
TTC3-217ENST00000481605 RARSP54136 660 aaKnown RBP29.4■■■□□ 2.3
TTC3-217ENST00000481605 ARMC9Q7Z3E5 817 aa29.4■■■□□ 2.3
TTC3-217ENST00000481605 TTF2Q9UNY4 1162 aaKnown RBP29.4■■■□□ 2.3
TTC3-217ENST00000481605 IQSEC3Q9UPP2 1182 aaPredicted RBP29.4■■■□□ 2.3
TTC3-217ENST00000481605 AOX1Q06278 1338 aa29.39■■■□□ 2.3
TTC3-217ENST00000481605 REM2Q8IYK8 340 aaPredicted RBP29.39■■■□□ 2.3
TTC3-217ENST00000481605 VEZTQ9HBM0 779 aa29.39■■■□□ 2.3
TTC3-217ENST00000481605 ECM29Q5VYK3 1845 aa29.39■■■□□ 2.29
TTC3-217ENST00000481605 PPP2R3BQ9Y5P8 575 aa29.38■■■□□ 2.29
TTC3-217ENST00000481605 CASP8AP2Q9UKL3 1982 aa29.38■■■□□ 2.29
TTC3-217ENST00000481605 FRAT2O75474 233 aaPredicted RBP29.37■■■□□ 2.29
TTC3-217ENST00000481605 PTPN12Q05209 780 aaKnown RBP29.37■■■□□ 2.29
TTC3-217ENST00000481605 SERPINA10Q9UK55 444 aa29.37■■■□□ 2.29
TTC3-217ENST00000481605 EYA2O00167 538 aa29.36■■■□□ 2.29
TTC3-217ENST00000481605 CHAF1AQ13111 956 aaPredicted RBP29.36■■■□□ 2.29
TTC3-217ENST00000481605 PUM3Q15397 648 aaKnown RBP29.36■■■□□ 2.29
TTC3-217ENST00000481605 ANGEL1Q9UNK9 670 aaKnown RBP29.36■■■□□ 2.29
TTC3-217ENST00000481605 FZD1Q9UP38 647 aa29.36■■■□□ 2.29
TTC3-217ENST00000481605 BCAMP50895 628 aa29.35■■■□□ 2.29
TTC3-217ENST00000481605 AKAP11Q9UKA4 1901 aa29.35■■■□□ 2.29
TTC3-217ENST00000481605 IFIT1P09914 478 aaKnown RBP29.35■■■□□ 2.29
TTC3-217ENST00000481605 FGFR2P21802 821 aa29.35■■■□□ 2.29
TTC3-217ENST00000481605 ARAP2Q8WZ64 1704 aa29.34■■■□□ 2.29
TTC3-217ENST00000481605 KIF16BQ96L93 1317 aa29.34■■■□□ 2.29
TTC3-217ENST00000481605 LDLRAD1Q5T700 205 aa29.34■■■□□ 2.29
TTC3-217ENST00000481605 MKRN3Q13064 507 aaKnown RBP29.33■■■□□ 2.29
TTC3-217ENST00000481605 GRIK5Q16478 980 aa29.33■■■□□ 2.29
TTC3-217ENST00000481605 TBC1D22AQ8WUA7 517 aa29.33■■■□□ 2.29
TTC3-217ENST00000481605 LRRFIP2Q9Y608 721 aaKnown RBP29.33■■■□□ 2.29
TTC3-217ENST00000481605 CRKP46108 304 aa29.32■■■□□ 2.28
TTC3-217ENST00000481605 RASA3Q14644 834 aa29.32■■■□□ 2.28
TTC3-217ENST00000481605 SUPT20HL1Q3ZLR7 823 aa29.32■■■□□ 2.28
TTC3-217ENST00000481605 ATG9AQ7Z3C6 839 aa29.32■■■□□ 2.28
TTC3-217ENST00000481605 DZIP1LQ8IYY4 767 aaKnown RBP29.32■■■□□ 2.28
TTC3-217ENST00000481605 MCOLN1Q9GZU1 580 aa29.32■■■□□ 2.28
TTC3-217ENST00000481605 SIL1Q9H173 461 aa29.32■■■□□ 2.28
TTC3-217ENST00000481605 TDRD3Q9H7E2 651 aaKnown RBP29.32■■■□□ 2.28
TTC3-217ENST00000481605 ZNF70Q9UC06 446 aaPredicted RBP29.32■■■□□ 2.28
TTC3-217ENST00000481605 HDAC5Q9UQL6 1122 aa29.32■■■□□ 2.28
TTC3-217ENST00000481605 SSC5DA1L4H1 1573 aa29.32■■■□□ 2.28
TTC3-217ENST00000481605 PPP1R12BO60237 982 aaPredicted RBP29.31■■■□□ 2.28
TTC3-217ENST00000481605 SPDYE2Q495Y8 402 aa29.31■■■□□ 2.28
TTC3-217ENST00000481605 ARHGAP45Q92619 1136 aa29.31■■■□□ 2.28
TTC3-217ENST00000481605 MEIS3Q99687 375 aa29.31■■■□□ 2.28
TTC3-217ENST00000481605 SLC5A1P13866 664 aa29.3■■■□□ 2.28
TTC3-217ENST00000481605 DGKZQ13574 1117 aa29.3■■■□□ 2.28
TTC3-217ENST00000481605 NBPF12Q5TAG4 269 aaPredicted RBP29.3■■■□□ 2.28
TTC3-217ENST00000481605 LPIN2Q92539 896 aa29.3■■■□□ 2.28
TTC3-217ENST00000481605 TNFAIP1Q13829 316 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms