RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 FGFR2P21802 821 aa25.07■■□□□ 1.6
VPS36-204ENST00000480923 MTX1Q13505 466 aa25.07■■□□□ 1.6
VPS36-204ENST00000480923 DLK2Q6UY11 383 aa25.07■■□□□ 1.6
VPS36-204ENST00000480923 FBXO33Q7Z6M2 555 aa25.07■■□□□ 1.6
VPS36-204ENST00000480923 SULF1Q8IWU6 871 aa25.07■■□□□ 1.6
VPS36-204ENST00000480923 COPRSQ9NQ92 184 aa25.07■■□□□ 1.6
VPS36-204ENST00000480923 CEP126Q9P2H0 1117 aa25.07■■□□□ 1.6
VPS36-204ENST00000480923 F8W031 263 aaPredicted RBP25.06■■□□□ 1.6
VPS36-204ENST00000480923 FRAT2O75474 233 aaPredicted RBP25.06■■□□□ 1.6
VPS36-204ENST00000480923 SLC5A1P13866 664 aa25.06■■□□□ 1.6
VPS36-204ENST00000480923 IL15P40933 162 aaPredicted RBP25.06■■□□□ 1.6
VPS36-204ENST00000480923 DEFB115Q30KQ5 88 aa25.06■■□□□ 1.6
VPS36-204ENST00000480923 IQSEC3Q9UPP2 1182 aaPredicted RBP25.06■■□□□ 1.6
VPS36-204ENST00000480923 ZNF646O15015 1829 aaPredicted RBP25.06■■□□□ 1.6
VPS36-204ENST00000480923 FAM205AQ6ZU69 1335 aa25.06■■□□□ 1.6
VPS36-204ENST00000480923 BCAMP50895 628 aa25.05■■□□□ 1.6
VPS36-204ENST00000480923 FKBP1AP62942 108 aaKnown RBP25.05■■□□□ 1.6
VPS36-204ENST00000480923 NBPF9Q3BBW0 867 aa25.05■■□□□ 1.6
VPS36-204ENST00000480923 LPIN2Q92539 896 aa25.05■■□□□ 1.6
VPS36-204ENST00000480923 RASSF10A6NK89 507 aa25.04■■□□□ 1.6
VPS36-204ENST00000480923 WNT10BO00744 389 aa25.03■■□□□ 1.6
VPS36-204ENST00000480923 VEGFBP49765 207 aa25.03■■□□□ 1.6
VPS36-204ENST00000480923 CHAF1AQ13111 956 aaPredicted RBP25.03■■□□□ 1.6
VPS36-204ENST00000480923 ATP2B3Q16720 1220 aa25.03■■□□□ 1.6
VPS36-204ENST00000480923 MFSD14BQ5SR56 506 aa25.03■■□□□ 1.6
VPS36-204ENST00000480923 PAXIP1Q6ZW49 1069 aaPredicted RBP25.03■■□□□ 1.6
VPS36-204ENST00000480923 RCAN3Q9UKA8 241 aa25.03■■□□□ 1.6
VPS36-204ENST00000480923 TLL2Q9Y6L7 1015 aa25.03■■□□□ 1.6
VPS36-204ENST00000480923 DLGAP5Q15398 846 aa25.02■■□□□ 1.6
VPS36-204ENST00000480923 PANK1Q8TE04 598 aa25.02■■□□□ 1.6
VPS36-204ENST00000480923 PITPNM2Q9BZ72 1349 aa25.02■■□□□ 1.6
VPS36-204ENST00000480923 MS4A1P11836 297 aa25.01■■□□□ 1.59
VPS36-204ENST00000480923 C1orf115Q9H7X2 142 aa25.01■■□□□ 1.59
VPS36-204ENST00000480923 PNMA6EA0A0J9YXQ4 647 aa25■■□□□ 1.59
VPS36-204ENST00000480923 CDCA5Q96FF9 252 aa25■■□□□ 1.59
VPS36-204ENST00000480923 SCAF8Q9UPN6 1271 aaKnown RBP25■■□□□ 1.59
VPS36-204ENST00000480923 TRPM7Q96QT4 1865 aa25■■□□□ 1.59
VPS36-204ENST00000480923 ZBTB7BO15156 539 aaPredicted RBP24.99■■□□□ 1.59
VPS36-204ENST00000480923 RBM5P52756 815 aaKnown RBP eCLIP24.99■■□□□ 1.59
VPS36-204ENST00000480923 SAPCD2Q86UD0 394 aa24.99■■□□□ 1.59
VPS36-204ENST00000480923 ZBED3Q96IU2 234 aaPredicted RBP24.99■■□□□ 1.59
VPS36-204ENST00000480923 GRM1Q13255 1194 aa24.98■■□□□ 1.59
VPS36-204ENST00000480923 CFAP100Q494V2 611 aa24.98■■□□□ 1.59
VPS36-204ENST00000480923 TBC1D22AQ8WUA7 517 aa24.98■■□□□ 1.59
VPS36-204ENST00000480923 TTF2Q9UNY4 1162 aaKnown RBP24.98■■□□□ 1.59
VPS36-204ENST00000480923 WDR33Q9C0J8 1336 aaKnown RBP24.97■■□□□ 1.59
VPS36-204ENST00000480923 TFCP2Q12800 502 aa24.97■■□□□ 1.59
VPS36-204ENST00000480923 G3BP1Q13283 466 aaKnown RBP eCLIP24.97■■□□□ 1.59
VPS36-204ENST00000480923 C2orf69Q8N8R5 385 aa24.97■■□□□ 1.59
VPS36-204ENST00000480923 GBA2Q9HCG7 927 aaPredicted RBP24.97■■□□□ 1.59
VPS36-204ENST00000480923 PCDHAC2Q9Y5I4 1007 aa24.97■■□□□ 1.59
VPS36-204ENST00000480923 ECE1P42892 770 aa24.96■■□□□ 1.59
VPS36-204ENST00000480923 ATP8B2P98198 1209 aa24.96■■□□□ 1.59
VPS36-204ENST00000480923 CYP4F22Q6NT55 531 aa24.96■■□□□ 1.59
VPS36-204ENST00000480923 MTMR14Q8NCE2 650 aa24.96■■□□□ 1.59
VPS36-204ENST00000480923 CAPNS2Q96L46 248 aa24.96■■□□□ 1.59
VPS36-204ENST00000480923 MYO1BO43795 1136 aa24.95■■□□□ 1.58
VPS36-204ENST00000480923 HUNKP57058 714 aa24.95■■□□□ 1.58
VPS36-204ENST00000480923 APOBEC3FQ8IUX4 373 aaKnown RBP24.95■■□□□ 1.58
VPS36-204ENST00000480923 GNL3LQ9NVN8 582 aaKnown RBP24.95■■□□□ 1.58
VPS36-204ENST00000480923 AKAP2Q9Y2D5 859 aa24.95■■□□□ 1.58
VPS36-204ENST00000480923 SPDYE2BA6NHP3 402 aa24.94■■□□□ 1.58
VPS36-204ENST00000480923 SPDYE6P0CI01 402 aa24.94■■□□□ 1.58
VPS36-204ENST00000480923 HSPA1AP0DMV8 641 aaKnown RBP24.94■■□□□ 1.58
VPS36-204ENST00000480923 HSPA1BP0DMV9 641 aaKnown RBP24.94■■□□□ 1.58
VPS36-204ENST00000480923 ADORA1P30542 326 aa24.94■■□□□ 1.58
VPS36-204ENST00000480923 POLA2Q14181 598 aa24.94■■□□□ 1.58
VPS36-204ENST00000480923 SERPINA10Q9UK55 444 aa24.94■■□□□ 1.58
VPS36-204ENST00000480923 TIMM10P62072 90 aa24.93■■□□□ 1.58
VPS36-204ENST00000480923 GRIK5Q16478 980 aa24.93■■□□□ 1.58
VPS36-204ENST00000480923 PRAMEF18Q5VWM3 479 aa24.93■■□□□ 1.58
VPS36-204ENST00000480923 SSH3Q8TE77 659 aa24.93■■□□□ 1.58
VPS36-204ENST00000480923 HHIPL1Q96JK4 782 aa24.93■■□□□ 1.58
VPS36-204ENST00000480923 PRMT6Q96LA8 375 aaPredicted RBP24.93■■□□□ 1.58
VPS36-204ENST00000480923 A0A1B0GUL7 405 aa24.92■■□□□ 1.58
VPS36-204ENST00000480923 CLRN2A0PK11 232 aa24.92■■□□□ 1.58
VPS36-204ENST00000480923 PHKA1P46020 1223 aa24.92■■□□□ 1.58
VPS36-204ENST00000480923 MVPQ14764 893 aaKnown RBP24.92■■□□□ 1.58
VPS36-204ENST00000480923 WDR66Q8TBY9 1149 aa24.92■■□□□ 1.58
VPS36-204ENST00000480923 POLR2AP24928 1970 aaKnown RBP24.92■■□□□ 1.58
VPS36-204ENST00000480923 OS9Q13438 667 aaPredicted RBP24.91■■□□□ 1.58
VPS36-204ENST00000480923 YTHDC1Q96MU7 727 aaKnown RBP24.91■■□□□ 1.58
VPS36-204ENST00000480923 NEUROD6Q96NK8 337 aa24.91■■□□□ 1.58
VPS36-204ENST00000480923 VEZTQ9HBM0 779 aa24.91■■□□□ 1.58
VPS36-204ENST00000480923 COG6Q9Y2V7 657 aa24.91■■□□□ 1.58
VPS36-204ENST00000480923 SURF6O75683 361 aaKnown RBP24.9■■□□□ 1.58
VPS36-204ENST00000480923 CRKP46108 304 aa24.9■■□□□ 1.58
VPS36-204ENST00000480923 CCDC102BQ68D86 513 aa24.9■■□□□ 1.58
VPS36-204ENST00000480923 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.9■■□□□ 1.58
VPS36-204ENST00000480923 AOX1Q06278 1338 aa24.89■■□□□ 1.58
VPS36-204ENST00000480923 NF2P35240 595 aa24.89■■□□□ 1.58
VPS36-204ENST00000480923 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.89■■□□□ 1.58
VPS36-204ENST00000480923 XAGE2Q96GT9 111 aa24.89■■□□□ 1.58
VPS36-204ENST00000480923 DENND2AQ9ULE3 1009 aa24.89■■□□□ 1.58
VPS36-204ENST00000480923 DDX19BQ9UMR2 479 aa24.89■■□□□ 1.58
VPS36-204ENST00000480923 SUGT1Q9Y2Z0 365 aa24.89■■□□□ 1.58
VPS36-204ENST00000480923 ARAP2Q8WZ64 1704 aa24.89■■□□□ 1.57
VPS36-204ENST00000480923 COL1A1P02452 1464 aaPredicted RBP24.89■■□□□ 1.57
VPS36-204ENST00000480923 MAST3O60307 1309 aa24.88■■□□□ 1.57
VPS36-204ENST00000480923 SEMA3EO15041 775 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms