RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 PLIN1O60240 522 aa14.31□□□□□ -0.12
CCM2-213ENST00000480658 PDE8BO95263 885 aa14.31□□□□□ -0.12
CCM2-213ENST00000480658 KLRK1P26718 216 aa14.31□□□□□ -0.12
CCM2-213ENST00000480658 ZNF157P51786 506 aaPredicted RBP14.31□□□□□ -0.12
CCM2-213ENST00000480658 FMR1Q06787 632 aaKnown RBP eCLIP14.31□□□□□ -0.12
CCM2-213ENST00000480658 PUM3Q15397 648 aaKnown RBP14.31□□□□□ -0.12
CCM2-213ENST00000480658 CDCA7LQ96GN5 454 aa14.31□□□□□ -0.12
CCM2-213ENST00000480658 KAZALD1Q96I82 304 aa14.31□□□□□ -0.12
CCM2-213ENST00000480658 RIPOR2Q9Y4F9 1068 aa14.31□□□□□ -0.12
CCM2-213ENST00000480658 ARAP2Q8WZ64 1704 aa14.31□□□□□ -0.12
CCM2-213ENST00000480658 MAST3O60307 1309 aa14.31□□□□□ -0.12
CCM2-213ENST00000480658 FRAT2O75474 233 aaPredicted RBP14.3□□□□□ -0.12
CCM2-213ENST00000480658 GNAI3P08754 354 aa14.3□□□□□ -0.12
CCM2-213ENST00000480658 IFIT1P09914 478 aaKnown RBP14.3□□□□□ -0.12
CCM2-213ENST00000480658 NBPF9Q3BBW0 867 aa14.3□□□□□ -0.12
CCM2-213ENST00000480658 HELBQ8NG08 1087 aaPredicted RBP14.3□□□□□ -0.12
CCM2-213ENST00000480658 ZNF594Q96JF6 807 aaPredicted RBP14.3□□□□□ -0.12
CCM2-213ENST00000480658 SERPINA10Q9UK55 444 aa14.3□□□□□ -0.12
CCM2-213ENST00000480658 SUGT1Q9Y2Z0 365 aa14.3□□□□□ -0.12
CCM2-213ENST00000480658 CIAO1O76071 339 aa14.29□□□□□ -0.12
CCM2-213ENST00000480658 HSPA8P11142 646 aaKnown RBP14.29□□□□□ -0.12
CCM2-213ENST00000480658 MFSD14BQ5SR56 506 aa14.29□□□□□ -0.12
CCM2-213ENST00000480658 DIEXFQ68CQ4 756 aaKnown RBP14.29□□□□□ -0.12
CCM2-213ENST00000480658 ARMC9Q7Z3E5 817 aa14.29□□□□□ -0.12
CCM2-213ENST00000480658 ANKRD44Q8N8A2 993 aa14.29□□□□□ -0.12
CCM2-213ENST00000480658 TDRD7Q8NHU6 1098 aaKnown RBP14.29□□□□□ -0.12
CCM2-213ENST00000480658 NOB1Q9ULX3 412 aaKnown RBP14.29□□□□□ -0.12
CCM2-213ENST00000480658 ECM29Q5VYK3 1845 aa14.29□□□□□ -0.12
CCM2-213ENST00000480658 WTIPA6NIX2 430 aaPredicted RBP14.28□□□□□ -0.12
CCM2-213ENST00000480658 PPP1R12BO60237 982 aaPredicted RBP14.28□□□□□ -0.12
CCM2-213ENST00000480658 SLC10A3P09131 477 aa14.28□□□□□ -0.12
CCM2-213ENST00000480658 SLC5A1P13866 664 aa14.28□□□□□ -0.12
CCM2-213ENST00000480658 LBX1P52954 281 aa14.28□□□□□ -0.12
CCM2-213ENST00000480658 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
CCM2-213ENST00000480658 HDLBPQ00341 1268 aaKnown RBP14.28□□□□□ -0.12
CCM2-213ENST00000480658 SUPT20HL1Q3ZLR7 823 aa14.28□□□□□ -0.12
CCM2-213ENST00000480658 LPIN2Q92539 896 aa14.28□□□□□ -0.12
CCM2-213ENST00000480658 ZBED3Q96IU2 234 aaPredicted RBP14.28□□□□□ -0.12
CCM2-213ENST00000480658 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
CCM2-213ENST00000480658 EYA2O00167 538 aa14.27□□□□□ -0.13
CCM2-213ENST00000480658 AOC2O75106 756 aa14.27□□□□□ -0.13
CCM2-213ENST00000480658 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
CCM2-213ENST00000480658 TNNI2P48788 182 aa14.27□□□□□ -0.13
CCM2-213ENST00000480658 TTLL12Q14166 644 aaPredicted RBP14.27□□□□□ -0.13
CCM2-213ENST00000480658 FAM84BQ96KN1 310 aaPredicted RBP14.27□□□□□ -0.13
CCM2-213ENST00000480658 GNL3LQ9NVN8 582 aaKnown RBP14.27□□□□□ -0.13
CCM2-213ENST00000480658 ASTN2O75129 1339 aaPredicted RBP14.26□□□□□ -0.13
CCM2-213ENST00000480658 FAM155AB1AL88 458 aaPredicted RBP14.26□□□□□ -0.13
CCM2-213ENST00000480658 IL15P40933 162 aaPredicted RBP14.26□□□□□ -0.13
CCM2-213ENST00000480658 RBM5P52756 815 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCM2-213ENST00000480658 SREBF2Q12772 1141 aa14.26□□□□□ -0.13
CCM2-213ENST00000480658 CFAP100Q494V2 611 aa14.26□□□□□ -0.13
CCM2-213ENST00000480658 INTS3Q68E01 1043 aaKnown RBP14.26□□□□□ -0.13
CCM2-213ENST00000480658 VGLL2Q8N8G2 317 aa14.26□□□□□ -0.13
CCM2-213ENST00000480658 HOOK2Q96ED9 719 aa14.26□□□□□ -0.13
CCM2-213ENST00000480658 MXD3Q9BW11 206 aa14.26□□□□□ -0.13
CCM2-213ENST00000480658 DEFB129Q9H1M3 183 aa14.26□□□□□ -0.13
CCM2-213ENST00000480658 SEMA3EO15041 775 aa14.25□□□□□ -0.13
CCM2-213ENST00000480658 ZBTB22O15209 634 aa14.25□□□□□ -0.13
CCM2-213ENST00000480658 GYG1P46976 350 aa14.25□□□□□ -0.13
CCM2-213ENST00000480658 FBXO33Q7Z6M2 555 aa14.25□□□□□ -0.13
CCM2-213ENST00000480658 CERS5Q8N5B7 392 aa14.25□□□□□ -0.13
CCM2-213ENST00000480658 MRIQ9BWK5 157 aa14.25□□□□□ -0.13
CCM2-213ENST00000480658 PUS3Q9BZE2 481 aaKnown RBP14.25□□□□□ -0.13
CCM2-213ENST00000480658 TMOD2Q9NZR1 351 aa14.25□□□□□ -0.13
CCM2-213ENST00000480658 TTF2Q9UNY4 1162 aaKnown RBP14.25□□□□□ -0.13
CCM2-213ENST00000480658 SNAP23O00161 211 aa14.24□□□□□ -0.13
CCM2-213ENST00000480658 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
CCM2-213ENST00000480658 LRRC24Q50LG9 513 aa14.24□□□□□ -0.13
CCM2-213ENST00000480658 ATF7IPQ6VMQ6 1270 aa14.24□□□□□ -0.13
CCM2-213ENST00000480658 RASAL3Q86YV0 1011 aa14.24□□□□□ -0.13
CCM2-213ENST00000480658 WDR66Q8TBY9 1149 aa14.24□□□□□ -0.13
CCM2-213ENST00000480658 TEKT1Q969V4 418 aa14.24□□□□□ -0.13
CCM2-213ENST00000480658 CEP126Q9P2H0 1117 aa14.24□□□□□ -0.13
CCM2-213ENST00000480658 F8W031 263 aaPredicted RBP14.23□□□□□ -0.13
CCM2-213ENST00000480658 ALDH1A1P00352 501 aa14.23□□□□□ -0.13
CCM2-213ENST00000480658 IREB2P48200 963 aaKnown RBP14.23□□□□□ -0.13
CCM2-213ENST00000480658 INHBEP58166 350 aa14.23□□□□□ -0.13
CCM2-213ENST00000480658 HNRNPUQ00839 825 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCM2-213ENST00000480658 KIF23Q02241 960 aaPredicted RBP14.23□□□□□ -0.13
CCM2-213ENST00000480658 MAP3K11Q16584 847 aa14.23□□□□□ -0.13
CCM2-213ENST00000480658 ZGPATQ8N5A5 531 aaKnown RBP14.23□□□□□ -0.13
CCM2-213ENST00000480658 VEZTQ9HBM0 779 aa14.23□□□□□ -0.13
CCM2-213ENST00000480658 COPRSQ9NQ92 184 aa14.23□□□□□ -0.13
CCM2-213ENST00000480658 AKAP2Q9Y2D5 859 aa14.23□□□□□ -0.13
CCM2-213ENST00000480658 ZBED9Q6R2W3 1325 aa14.22□□□□□ -0.13
CCM2-213ENST00000480658 ZBTB48P10074 688 aaPredicted RBP14.22□□□□□ -0.13
CCM2-213ENST00000480658 FGFR2P21802 821 aa14.22□□□□□ -0.13
CCM2-213ENST00000480658 RFX5P48382 616 aaPredicted RBP14.22□□□□□ -0.13
CCM2-213ENST00000480658 MTX1Q13505 466 aa14.22□□□□□ -0.13
CCM2-213ENST00000480658 SPDYE2Q495Y8 402 aa14.22□□□□□ -0.13
CCM2-213ENST00000480658 LRRFIP2Q9Y608 721 aaKnown RBP14.22□□□□□ -0.13
CCM2-213ENST00000480658 POLR2AP24928 1970 aaKnown RBP14.22□□□□□ -0.13
CCM2-213ENST00000480658 PDS5AQ29RF7 1337 aaKnown RBP14.21□□□□□ -0.13
CCM2-213ENST00000480658 GNAI2P04899 355 aa14.21□□□□□ -0.13
CCM2-213ENST00000480658 CRKP46108 304 aa14.21□□□□□ -0.13
CCM2-213ENST00000480658 ATP2B3Q16720 1220 aa14.21□□□□□ -0.13
CCM2-213ENST00000480658 FKBP1CQ5VVH2 108 aa14.21□□□□□ -0.13
CCM2-213ENST00000480658 ZKSCAN2Q63HK3 967 aa14.21□□□□□ -0.13
CCM2-213ENST00000480658 FTSJ3Q8IY81 847 aaKnown RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms