RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 SP3Q02447 781 aa14.5□□□□□ -0.09
TTC28-206ENST00000480563 NBPF12Q5TAG4 269 aaPredicted RBP14.5□□□□□ -0.09
TTC28-206ENST00000480563 TSPYL6Q8N831 410 aa14.5□□□□□ -0.09
TTC28-206ENST00000480563 ZNF646O15015 1829 aaPredicted RBP14.5□□□□□ -0.09
TTC28-206ENST00000480563 SSC5DA1L4H1 1573 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 F8W031 263 aaPredicted RBP14.49□□□□□ -0.09
TTC28-206ENST00000480563 SNAP23O00161 211 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 CSF1RP07333 972 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 GJA5P36382 358 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 IREB2P48200 963 aaKnown RBP14.49□□□□□ -0.09
TTC28-206ENST00000480563 CHRNDQ07001 517 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 DDX10Q13206 875 aaKnown RBP14.49□□□□□ -0.09
TTC28-206ENST00000480563 CFAP100Q494V2 611 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 PRMT6Q96LA8 375 aaPredicted RBP14.49□□□□□ -0.09
TTC28-206ENST00000480563 PTPN18Q99952 460 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 PLA2G12BQ9BX93 195 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 STK31Q9BXU1 1019 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 VEZTQ9HBM0 779 aa14.49□□□□□ -0.09
TTC28-206ENST00000480563 TESPA1A2RU30 521 aaPredicted RBP14.48□□□□□ -0.09
TTC28-206ENST00000480563 SPDYE2BA6NHP3 402 aa14.48□□□□□ -0.09
TTC28-206ENST00000480563 SPDYE6P0CI01 402 aa14.48□□□□□ -0.09
TTC28-206ENST00000480563 FXR1P51114 621 aaKnown RBP eCLIP14.48□□□□□ -0.09
TTC28-206ENST00000480563 GCKRQ14397 625 aa14.48□□□□□ -0.09
TTC28-206ENST00000480563 ANKRD13AQ8IZ07 590 aa14.48□□□□□ -0.09
TTC28-206ENST00000480563 TMEM106CQ9BVX2 250 aa14.48□□□□□ -0.09
TTC28-206ENST00000480563 IRS2Q9Y4H2 1338 aa14.47□□□□□ -0.09
TTC28-206ENST00000480563 TAF5LO75529 589 aa14.47□□□□□ -0.09
TTC28-206ENST00000480563 CAP1Q01518 475 aa14.47□□□□□ -0.09
TTC28-206ENST00000480563 RASA3Q14644 834 aa14.47□□□□□ -0.09
TTC28-206ENST00000480563 C15orf52Q6ZUT6 534 aaKnown RBP14.47□□□□□ -0.09
TTC28-206ENST00000480563 G2E3Q7L622 706 aa14.47□□□□□ -0.09
TTC28-206ENST00000480563 HELBQ8NG08 1087 aaPredicted RBP14.47□□□□□ -0.09
TTC28-206ENST00000480563 KIAA0100Q14667 2235 aaKnown RBP14.47□□□□□ -0.09
TTC28-206ENST00000480563 AOX1Q06278 1338 aa14.46□□□□□ -0.09
TTC28-206ENST00000480563 SPEF2Q9C093 1822 aa14.46□□□□□ -0.09
TTC28-206ENST00000480563 ANKRD18BA2A2Z9 1011 aa14.46□□□□□ -0.09
TTC28-206ENST00000480563 SLC4A2P04920 1241 aa14.46□□□□□ -0.09
TTC28-206ENST00000480563 IL1R1P14778 569 aa14.46□□□□□ -0.09
TTC28-206ENST00000480563 RBM5P52756 815 aaKnown RBP eCLIP14.46□□□□□ -0.09
TTC28-206ENST00000480563 CASP7P55210 303 aa14.46□□□□□ -0.09
TTC28-206ENST00000480563 FKBP1AP62942 108 aaKnown RBP14.46□□□□□ -0.09
TTC28-206ENST00000480563 ZNF333Q96JL9 665 aa14.46□□□□□ -0.09
TTC28-206ENST00000480563 ELP3Q9H9T3 547 aa14.46□□□□□ -0.09
TTC28-206ENST00000480563 HTTP42858 3142 aa14.46□□□□□ -0.1
TTC28-206ENST00000480563 ARHGEF6Q15052 776 aa14.45□□□□□ -0.1
TTC28-206ENST00000480563 ZNF804AQ7Z570 1209 aa14.45□□□□□ -0.1
TTC28-206ENST00000480563 OPTNQ96CV9 577 aa14.45□□□□□ -0.1
TTC28-206ENST00000480563 COLQQ9Y215 455 aaPredicted RBP14.45□□□□□ -0.1
TTC28-206ENST00000480563 JAG2Q9Y219 1238 aa14.45□□□□□ -0.1
TTC28-206ENST00000480563 NBPF11Q86T75 865 aa14.44□□□□□ -0.1
TTC28-206ENST00000480563 TSR2Q969E8 191 aaKnown RBP14.44□□□□□ -0.1
TTC28-206ENST00000480563 MS4A4AQ96JQ5 239 aa14.44□□□□□ -0.1
TTC28-206ENST00000480563 MYH16Q9H6N6 1097 aa14.44□□□□□ -0.1
TTC28-206ENST00000480563 MYH3P11055 1940 aa14.43□□□□□ -0.1
TTC28-206ENST00000480563 IFIT5Q13325 482 aaKnown RBP14.43□□□□□ -0.1
TTC28-206ENST00000480563 TWISTNBQ3B726 338 aaPredicted RBP14.43□□□□□ -0.1
TTC28-206ENST00000480563 SLC9C1Q4G0N8 1177 aa14.43□□□□□ -0.1
TTC28-206ENST00000480563 LINS1Q8NG48 757 aa14.43□□□□□ -0.1
TTC28-206ENST00000480563 BRI3BPQ8WY22 251 aa14.43□□□□□ -0.1
TTC28-206ENST00000480563 ZFYVE28Q9HCC9 887 aa14.43□□□□□ -0.1
TTC28-206ENST00000480563 PTCH2Q9Y6C5 1203 aa14.43□□□□□ -0.1
TTC28-206ENST00000480563 MKI67P46013 3256 aaKnown RBP14.42□□□□□ -0.1
TTC28-206ENST00000480563 TNFAIP1Q13829 316 aa14.42□□□□□ -0.1
TTC28-206ENST00000480563 TAF1CQ15572 869 aaPredicted RBP14.42□□□□□ -0.1
TTC28-206ENST00000480563 SLC4A8Q2Y0W8 1093 aa14.42□□□□□ -0.1
TTC28-206ENST00000480563 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.42□□□□□ -0.1
TTC28-206ENST00000480563 CNKSR2Q8WXI2 1034 aa14.42□□□□□ -0.1
TTC28-206ENST00000480563 DNAAF4Q8WXU2 420 aa14.42□□□□□ -0.1
TTC28-206ENST00000480563 TDRD3Q9H7E2 651 aaKnown RBP14.42□□□□□ -0.1
TTC28-206ENST00000480563 ZNF70Q9UC06 446 aaPredicted RBP14.42□□□□□ -0.1
TTC28-206ENST00000480563 CCL15-CCL14A0A0B4J2E2 113 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 PLIN1O60240 522 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 MYCP01106 439 aaPredicted RBP14.41□□□□□ -0.1
TTC28-206ENST00000480563 GTF2A2P52657 109 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 MAP3K9P80192 1104 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 FOXO4P98177 505 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 FLIIQ13045 1269 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 FKBP5Q13451 457 aaPredicted RBP14.41□□□□□ -0.1
TTC28-206ENST00000480563 CCL15Q16663 113 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 SPDYE2Q495Y8 402 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 TEPSINQ96N21 525 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 CHMP3Q9Y3E7 222 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 RBBP6Q7Z6E9 1792 aaKnown RBP14.41□□□□□ -0.1
TTC28-206ENST00000480563 FAM205AQ6ZU69 1335 aa14.41□□□□□ -0.1
TTC28-206ENST00000480563 H0YGN5 161 aa14.4□□□□□ -0.1
TTC28-206ENST00000480563 VGLL4Q14135 290 aa14.4□□□□□ -0.1
TTC28-206ENST00000480563 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
TTC28-206ENST00000480563 FAM43AQ8N2R8 423 aa14.4□□□□□ -0.1
TTC28-206ENST00000480563 SERPINA10Q9UK55 444 aa14.4□□□□□ -0.1
TTC28-206ENST00000480563 TTF2Q9UNY4 1162 aaKnown RBP14.4□□□□□ -0.1
TTC28-206ENST00000480563 TCP10L2B9ZVM9 353 aa14.39□□□□□ -0.11
TTC28-206ENST00000480563 WDHD1O75717 1129 aaPredicted RBP14.39□□□□□ -0.11
TTC28-206ENST00000480563 MFSD14BQ5SR56 506 aa14.39□□□□□ -0.11
TTC28-206ENST00000480563 LDHAL6AQ6ZMR3 332 aa14.39□□□□□ -0.11
TTC28-206ENST00000480563 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
TTC28-206ENST00000480563 SH3TC2Q8TF17 1288 aa14.39□□□□□ -0.11
TTC28-206ENST00000480563 OTUD5Q96G74 571 aa14.39□□□□□ -0.11
TTC28-206ENST00000480563 TMEM39BQ9GZU3 492 aa14.39□□□□□ -0.11
TTC28-206ENST00000480563 PRKRIP1Q9H875 184 aaPredicted RBP14.39□□□□□ -0.11
TTC28-206ENST00000480563 CSADQ9Y600 493 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms