RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 OS9Q13438 667 aaPredicted RBP11.83□□□□□ -0.52
CD46-214ENST00000480003 B4GALNT3Q6L9W6 998 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 DPP8Q6V1X1 898 aaPredicted RBP11.83□□□□□ -0.52
CD46-214ENST00000480003 HS6ST3Q8IZP7 471 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 LPIN2Q92539 896 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 EAF2Q96CJ1 260 aaPredicted RBP11.83□□□□□ -0.52
CD46-214ENST00000480003 CCDC136Q96JN2 1154 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 LRRCC1Q9C099 1032 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 AKAP2Q9Y2D5 859 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 ZNF804BA4D1E1 1349 aa11.83□□□□□ -0.52
CD46-214ENST00000480003 BRCA1P38398 1863 aaKnown RBP11.83□□□□□ -0.52
CD46-214ENST00000480003 SMARCA5O60264 1052 aaPredicted RBP11.82□□□□□ -0.52
CD46-214ENST00000480003 C1QTNF8P60827 252 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 NUCB1Q02818 461 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 TNNI3KQ59H18 835 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 ANKRD45Q5TZF3 282 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 FBXO33Q7Z6M2 555 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 TXNRD3Q86VQ6 643 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 FAM84BQ96KN1 310 aaPredicted RBP11.82□□□□□ -0.52
CD46-214ENST00000480003 IL1RAPL2Q9NP60 686 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 FPGT-TNNI3KV9GXZ4 949 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 LTBP3Q9NS15 1303 aa11.82□□□□□ -0.52
CD46-214ENST00000480003 A0A1B0GUL7 405 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 APBB1O00213 710 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 GRIN3BO60391 1043 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 UFL1O94874 794 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 PRELPP51888 382 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 PUM3Q15397 648 aaKnown RBP11.81□□□□□ -0.52
CD46-214ENST00000480003 ARHGAP27Q6ZUM4 889 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 CENPQQ7L2Z9 268 aaPredicted RBP11.81□□□□□ -0.52
CD46-214ENST00000480003 CDAN1Q8IWY9 1227 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 C16orf71Q8IYS4 520 aaPredicted RBP11.81□□□□□ -0.52
CD46-214ENST00000480003 SUPT20HQ8NEM7 779 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 GTF3C3Q9Y5Q9 886 aa11.81□□□□□ -0.52
CD46-214ENST00000480003 IFIT1P09914 478 aaKnown RBP11.8□□□□□ -0.52
CD46-214ENST00000480003 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
CD46-214ENST00000480003 ATP2B3Q16720 1220 aa11.8□□□□□ -0.52
CD46-214ENST00000480003 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
CD46-214ENST00000480003 CLASRPQ8N2M8 674 aaKnown RBP11.8□□□□□ -0.52
CD46-214ENST00000480003 XAGE2Q96GT9 111 aa11.8□□□□□ -0.52
CD46-214ENST00000480003 GPR101Q96P66 508 aaPredicted RBP11.8□□□□□ -0.52
CD46-214ENST00000480003 EYA3Q99504 573 aa11.8□□□□□ -0.52
CD46-214ENST00000480003 CCDC8Q9H0W5 538 aaPredicted RBP11.8□□□□□ -0.52
CD46-214ENST00000480003 SLC5A1P13866 664 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 KLRK1P26718 216 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 ADORA1P30542 326 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 EMP3P54852 163 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 CHD1LQ86WJ1 897 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 NEUROD6Q96NK8 337 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 DBNDD2Q9BQY9 259 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 ZC3H12CQ9C0D7 883 aaKnown RBP11.79□□□□□ -0.52
CD46-214ENST00000480003 TAOK3Q9H2K8 898 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 ZNF277Q9NRM2 450 aaPredicted RBP11.79□□□□□ -0.52
CD46-214ENST00000480003 DBNLQ9UJU6 430 aaKnown RBP11.79□□□□□ -0.52
CD46-214ENST00000480003 UTRNP46939 3433 aa11.79□□□□□ -0.52
CD46-214ENST00000480003 LRRC37AA6NMS7 1700 aa11.78□□□□□ -0.52
CD46-214ENST00000480003 RIMBP2O15034 1052 aa11.78□□□□□ -0.52
CD46-214ENST00000480003 HIBADHP31937 336 aaKnown RBP11.78□□□□□ -0.52
CD46-214ENST00000480003 IARSP41252 1262 aaKnown RBP11.78□□□□□ -0.52
CD46-214ENST00000480003 KCNJ4P48050 445 aa11.78□□□□□ -0.52
CD46-214ENST00000480003 BCAMP50895 628 aa11.78□□□□□ -0.52
CD46-214ENST00000480003 DOK7Q18PE1 504 aa11.78□□□□□ -0.52
CD46-214ENST00000480003 AACSQ86V21 672 aa11.78□□□□□ -0.52
CD46-214ENST00000480003 SALL3Q9BXA9 1300 aa11.78□□□□□ -0.52
CD46-214ENST00000480003 MED23Q9ULK4 1368 aa11.78□□□□□ -0.52
CD46-214ENST00000480003 ARFGEF1Q9Y6D6 1849 aa11.77□□□□□ -0.52
CD46-214ENST00000480003 DUOX1Q9NRD9 1551 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 IL1R1P14778 569 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 GYG1P46976 350 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 RASSF7Q02833 373 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 CCDC102BQ68D86 513 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 TDRD7Q8NHU6 1098 aaKnown RBP11.77□□□□□ -0.53
CD46-214ENST00000480003 ZNF512BQ96KM6 892 aaPredicted RBP11.77□□□□□ -0.53
CD46-214ENST00000480003 LNPKQ9C0E8 428 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 COA1Q9GZY4 146 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 CD209Q9NNX6 404 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 TLR7Q9NYK1 1049 aaKnown RBP11.77□□□□□ -0.53
CD46-214ENST00000480003 STAP2Q9UGK3 403 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 LTBP1Q14766 1721 aa11.77□□□□□ -0.53
CD46-214ENST00000480003 PPIP5K2O43314 1243 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 IFIT2P09913 472 aaKnown RBP11.76□□□□□ -0.53
CD46-214ENST00000480003 LMNB1P20700 586 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 PDE4AP27815 886 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 PHKA1P46020 1223 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 AOC3Q16853 763 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 CAVIN4Q5BKX8 364 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 PODNQ7Z5L7 613 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 OTUD7AQ8TE49 926 aaPredicted RBP11.76□□□□□ -0.53
CD46-214ENST00000480003 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 ZNF609O15014 1411 aa11.76□□□□□ -0.53
CD46-214ENST00000480003 YDJCA8MPS7 323 aa11.75□□□□□ -0.53
CD46-214ENST00000480003 FZD9O00144 591 aa11.75□□□□□ -0.53
CD46-214ENST00000480003 ATP5JP18859 108 aa11.75□□□□□ -0.53
CD46-214ENST00000480003 ARID4AP29374 1257 aaPredicted RBP11.75□□□□□ -0.53
CD46-214ENST00000480003 CCDC158Q5M9N0 1113 aa11.75□□□□□ -0.53
CD46-214ENST00000480003 ZNF710Q8N1W2 664 aa11.75□□□□□ -0.53
CD46-214ENST00000480003 LARGE2Q8N3Y3 721 aa11.75□□□□□ -0.53
CD46-214ENST00000480003 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms