RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.79■□□□□ 0.28
VCL-205ENST00000478896 LDHAL6AQ6ZMR3 332 aa16.78■□□□□ 0.28
VCL-205ENST00000478896 C15orf52Q6ZUT6 534 aaKnown RBP16.78■□□□□ 0.28
VCL-205ENST00000478896 FAM9BQ8IZU0 186 aa16.78■□□□□ 0.28
VCL-205ENST00000478896 ZNF594Q96JF6 807 aaPredicted RBP16.78■□□□□ 0.28
VCL-205ENST00000478896 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
VCL-205ENST00000478896 JAG2Q9Y219 1238 aa16.78■□□□□ 0.28
VCL-205ENST00000478896 IRS2Q9Y4H2 1338 aa16.77■□□□□ 0.28
VCL-205ENST00000478896 IL1R1P14778 569 aa16.77■□□□□ 0.28
VCL-205ENST00000478896 PTPN12Q05209 780 aaKnown RBP16.77■□□□□ 0.28
VCL-205ENST00000478896 CFAP100Q494V2 611 aa16.77■□□□□ 0.28
VCL-205ENST00000478896 EPHA10Q5JZY3 1008 aa16.77■□□□□ 0.28
VCL-205ENST00000478896 CERS5Q8N5B7 392 aa16.77■□□□□ 0.28
VCL-205ENST00000478896 ZNF296Q8WUU4 475 aaPredicted RBP16.77■□□□□ 0.28
VCL-205ENST00000478896 ZBED3Q96IU2 234 aaPredicted RBP16.77■□□□□ 0.28
VCL-205ENST00000478896 DEFB129Q9H1M3 183 aa16.77■□□□□ 0.28
VCL-205ENST00000478896 VEZTQ9HBM0 779 aa16.77■□□□□ 0.28
VCL-205ENST00000478896 CLRN2A0PK11 232 aa16.76■□□□□ 0.27
VCL-205ENST00000478896 ZEB1P37275 1124 aaPredicted RBP16.76■□□□□ 0.27
VCL-205ENST00000478896 TM4SF4P48230 202 aa16.76■□□□□ 0.27
VCL-205ENST00000478896 RBM5P52756 815 aaKnown RBP eCLIP16.76■□□□□ 0.27
VCL-205ENST00000478896 SRCIN1Q9C0H9 1055 aa16.76■□□□□ 0.27
VCL-205ENST00000478896 FZD1Q9UP38 647 aa16.76■□□□□ 0.27
VCL-205ENST00000478896 PPP2R3BQ9Y5P8 575 aa16.76■□□□□ 0.27
VCL-205ENST00000478896 ZNF316A6NFI3 1004 aaPredicted RBP16.75■□□□□ 0.27
VCL-205ENST00000478896 PPP1R12BO60237 982 aaPredicted RBP16.75■□□□□ 0.27
VCL-205ENST00000478896 ALDH1L1O75891 902 aa16.75■□□□□ 0.27
VCL-205ENST00000478896 FKBP1AP62942 108 aaKnown RBP16.75■□□□□ 0.27
VCL-205ENST00000478896 MTMR14Q8NCE2 650 aa16.75■□□□□ 0.27
VCL-205ENST00000478896 PCDHAC2Q9Y5I4 1007 aa16.75■□□□□ 0.27
VCL-205ENST00000478896 ARAP2Q8WZ64 1704 aa16.75■□□□□ 0.27
VCL-205ENST00000478896 SPDYE2BA6NHP3 402 aa16.74■□□□□ 0.27
VCL-205ENST00000478896 GPR25O00155 361 aa16.74■□□□□ 0.27
VCL-205ENST00000478896 SPDYE6P0CI01 402 aa16.74■□□□□ 0.27
VCL-205ENST00000478896 PKN2Q16513 984 aaKnown RBP16.74■□□□□ 0.27
VCL-205ENST00000478896 SPRYD7Q5W111 196 aa16.74■□□□□ 0.27
VCL-205ENST00000478896 SSC5DA1L4H1 1573 aa16.73■□□□□ 0.27
VCL-205ENST00000478896 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
VCL-205ENST00000478896 HPS5Q9UPZ3 1129 aa16.73■□□□□ 0.27
VCL-205ENST00000478896 MANSC4A6NHS7 340 aaPredicted RBP16.72■□□□□ 0.27
VCL-205ENST00000478896 ALDH1A1P00352 501 aa16.72■□□□□ 0.27
VCL-205ENST00000478896 SUPT20HL1Q3ZLR7 823 aa16.72■□□□□ 0.27
VCL-205ENST00000478896 MFSD14BQ5SR56 506 aa16.72■□□□□ 0.27
VCL-205ENST00000478896 LDLRAD1Q5T700 205 aa16.72■□□□□ 0.27
VCL-205ENST00000478896 SUCLG2Q96I99 432 aa16.72■□□□□ 0.27
VCL-205ENST00000478896 PRMT6Q96LA8 375 aaPredicted RBP16.72■□□□□ 0.27
VCL-205ENST00000478896 FKTNO75072 461 aa16.71■□□□□ 0.27
VCL-205ENST00000478896 ZBTB48P10074 688 aaPredicted RBP16.71■□□□□ 0.27
VCL-205ENST00000478896 HIBADHP31937 336 aaKnown RBP16.71■□□□□ 0.27
VCL-205ENST00000478896 GYG1P46976 350 aa16.71■□□□□ 0.27
VCL-205ENST00000478896 TNFAIP1Q13829 316 aa16.71■□□□□ 0.27
VCL-205ENST00000478896 UBE4AQ14139 1066 aa16.71■□□□□ 0.27
VCL-205ENST00000478896 MAP3K11Q16584 847 aa16.71■□□□□ 0.27
VCL-205ENST00000478896 NOM1Q5C9Z4 860 aaKnown RBP16.71■□□□□ 0.27
VCL-205ENST00000478896 TTF2Q9UNY4 1162 aaKnown RBP16.71■□□□□ 0.27
VCL-205ENST00000478896 LAMB1P07942 1786 aa16.71■□□□□ 0.27
VCL-205ENST00000478896 OTOFQ9HC10 1997 aa16.7■□□□□ 0.26
VCL-205ENST00000478896 IREB2P48200 963 aaKnown RBP16.7■□□□□ 0.26
VCL-205ENST00000478896 VPS37DQ86XT2 251 aa16.7■□□□□ 0.26
VCL-205ENST00000478896 WNK4Q96J92 1243 aa16.7■□□□□ 0.26
VCL-205ENST00000478896 FAM205AQ6ZU69 1335 aa16.7■□□□□ 0.26
VCL-205ENST00000478896 NBPF7P0C2Y1 421 aaPredicted RBP16.69■□□□□ 0.26
VCL-205ENST00000478896 INHBEP58166 350 aa16.69■□□□□ 0.26
VCL-205ENST00000478896 RASA3Q14644 834 aa16.69■□□□□ 0.26
VCL-205ENST00000478896 NBPF12Q5TAG4 269 aaPredicted RBP16.69■□□□□ 0.26
VCL-205ENST00000478896 FBXO46Q6PJ61 603 aaPredicted RBP16.69■□□□□ 0.26
VCL-205ENST00000478896 IFNL1Q8IU54 200 aa16.69■□□□□ 0.26
VCL-205ENST00000478896 TDRD7Q8NHU6 1098 aaKnown RBP16.69■□□□□ 0.26
VCL-205ENST00000478896 CLMNQ96JQ2 1002 aa16.69■□□□□ 0.26
VCL-205ENST00000478896 CFHR5Q9BXR6 569 aa16.69■□□□□ 0.26
VCL-205ENST00000478896 PUS3Q9BZE2 481 aaKnown RBP16.69■□□□□ 0.26
VCL-205ENST00000478896 AOX1Q06278 1338 aa16.69■□□□□ 0.26
VCL-205ENST00000478896 MROH5Q6ZUA9 1318 aa16.69■□□□□ 0.26
VCL-205ENST00000478896 FRAT2O75474 233 aaPredicted RBP16.68■□□□□ 0.26
VCL-205ENST00000478896 BICC1Q9H694 974 aaKnown RBP16.68■□□□□ 0.26
VCL-205ENST00000478896 SERPINA10Q9UK55 444 aa16.68■□□□□ 0.26
VCL-205ENST00000478896 UNCXA6NJT0 531 aa16.67■□□□□ 0.26
VCL-205ENST00000478896 SLC34A2O95436 690 aa16.67■□□□□ 0.26
VCL-205ENST00000478896 CHAF1AQ13111 956 aaPredicted RBP16.67■□□□□ 0.26
VCL-205ENST00000478896 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
VCL-205ENST00000478896 METTL24Q5JXM2 366 aa16.67■□□□□ 0.26
VCL-205ENST00000478896 ANKRD13AQ8IZ07 590 aa16.67■□□□□ 0.26
VCL-205ENST00000478896 KAZALD1Q96I82 304 aa16.67■□□□□ 0.26
VCL-205ENST00000478896 FAM84BQ96KN1 310 aaPredicted RBP16.67■□□□□ 0.26
VCL-205ENST00000478896 R3HDMLQ9H3Y0 253 aa16.67■□□□□ 0.26
VCL-205ENST00000478896 TDRD3Q9H7E2 651 aaKnown RBP16.67■□□□□ 0.26
VCL-205ENST00000478896 ZNF70Q9UC06 446 aaPredicted RBP16.67■□□□□ 0.26
VCL-205ENST00000478896 IQSEC3Q9UPP2 1182 aaPredicted RBP16.67■□□□□ 0.26
VCL-205ENST00000478896 CRKP46108 304 aa16.66■□□□□ 0.26
VCL-205ENST00000478896 CAVIN4Q5BKX8 364 aa16.66■□□□□ 0.26
VCL-205ENST00000478896 OTUD7BQ6GQQ9 843 aa16.66■□□□□ 0.26
VCL-205ENST00000478896 RIPOR2Q9Y4F9 1068 aa16.66■□□□□ 0.26
VCL-205ENST00000478896 UTYO14607 1347 aa16.66■□□□□ 0.26
VCL-205ENST00000478896 MYH13Q9UKX3 1938 aa16.65■□□□□ 0.26
VCL-205ENST00000478896 TCP10L2B9ZVM9 353 aa16.65■□□□□ 0.26
VCL-205ENST00000478896 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
VCL-205ENST00000478896 USP2O75604 605 aaPredicted RBP16.65■□□□□ 0.26
VCL-205ENST00000478896 TNNI2P48788 182 aa16.65■□□□□ 0.26
VCL-205ENST00000478896 RABL6Q3YEC7 729 aaPredicted RBP16.65■□□□□ 0.26
VCL-205ENST00000478896 LRRC24Q50LG9 513 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms