RNA–Protein interactions for RNA: ENST00000478693.1

SRRT-211, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-211ENST00000478693 EAPPQ56P03 285 aaPredicted RBP13.97□□□□□ -0.17
SRRT-211ENST00000478693 MICALL2Q8IY33 904 aa13.97□□□□□ -0.17
SRRT-211ENST00000478693 AGBL3Q8NEM8 1001 aa13.97□□□□□ -0.17
SRRT-211ENST00000478693 DBNDD2Q9BQY9 259 aa13.97□□□□□ -0.17
SRRT-211ENST00000478693 MXD3Q9BW11 206 aa13.97□□□□□ -0.17
SRRT-211ENST00000478693 F8W031 263 aaPredicted RBP13.96□□□□□ -0.17
SRRT-211ENST00000478693 H7C1D1 291 aa13.96□□□□□ -0.17
SRRT-211ENST00000478693 EPHX2P34913 555 aa13.96□□□□□ -0.17
SRRT-211ENST00000478693 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
SRRT-211ENST00000478693 MFSD14BQ5SR56 506 aa13.96□□□□□ -0.17
SRRT-211ENST00000478693 DACT2Q5SW24 774 aa13.96□□□□□ -0.17
SRRT-211ENST00000478693 DCTPP1Q9H773 170 aa13.96□□□□□ -0.17
SRRT-211ENST00000478693 TLR7Q9NYK1 1049 aaKnown RBP13.96□□□□□ -0.17
SRRT-211ENST00000478693 GPRC5DQ9NZD1 345 aa13.96□□□□□ -0.17
SRRT-211ENST00000478693 CNOT7Q9UIV1 285 aaKnown RBP13.96□□□□□ -0.17
SRRT-211ENST00000478693 HDAC9Q9UKV0 1011 aa13.96□□□□□ -0.17
SRRT-211ENST00000478693 DENND2AQ9ULE3 1009 aa13.96□□□□□ -0.17
SRRT-211ENST00000478693 SEMA3EO15041 775 aa13.95□□□□□ -0.18
SRRT-211ENST00000478693 SMARCA5O60264 1052 aaPredicted RBP13.95□□□□□ -0.18
SRRT-211ENST00000478693 UQCRFS1P1P0C7P4 283 aa13.95□□□□□ -0.18
SRRT-211ENST00000478693 EPS15P42566 896 aa13.95□□□□□ -0.18
SRRT-211ENST00000478693 KIAA0825Q8IV33 1275 aa13.95□□□□□ -0.18
SRRT-211ENST00000478693 OGFOD1Q8N543 542 aa13.95□□□□□ -0.18
SRRT-211ENST00000478693 TBC1D22AQ8WUA7 517 aa13.95□□□□□ -0.18
SRRT-211ENST00000478693 DPF2Q92785 391 aa13.95□□□□□ -0.18
SRRT-211ENST00000478693 EAF2Q96CJ1 260 aaPredicted RBP13.95□□□□□ -0.18
SRRT-211ENST00000478693 GCC1Q96CN9 775 aa13.95□□□□□ -0.18
SRRT-211ENST00000478693 TAF1DQ9H5J8 278 aaPredicted RBP13.95□□□□□ -0.18
SRRT-211ENST00000478693 DBNLQ9UJU6 430 aaKnown RBP13.95□□□□□ -0.18
SRRT-211ENST00000478693 SCN9AQ15858 1988 aa13.94□□□□□ -0.18
SRRT-211ENST00000478693 FAM205AQ6ZU69 1335 aa13.94□□□□□ -0.18
SRRT-211ENST00000478693 USP17L8P0C7I0 530 aa13.94□□□□□ -0.18
SRRT-211ENST00000478693 RBM26Q5T8P6 1007 aaKnown RBP13.94□□□□□ -0.18
SRRT-211ENST00000478693 WDR66Q8TBY9 1149 aa13.94□□□□□ -0.18
SRRT-211ENST00000478693 ADARB2Q9NS39 739 aaKnown RBP13.94□□□□□ -0.18
SRRT-211ENST00000478693 CLEC11AQ9Y240 323 aa13.94□□□□□ -0.18
SRRT-211ENST00000478693 COL1A1P02452 1464 aaPredicted RBP13.93□□□□□ -0.18
SRRT-211ENST00000478693 UTRNP46939 3433 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 PSME4Q14997 1843 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 SHTN1A0MZ66 631 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 POTECB2RU33 542 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 KIF3CO14782 793 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 ARID4AP29374 1257 aaPredicted RBP13.93□□□□□ -0.18
SRRT-211ENST00000478693 FKBP1AP62942 108 aaKnown RBP13.93□□□□□ -0.18
SRRT-211ENST00000478693 RASGRF1Q13972 1273 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 KIF4BQ2VIQ3 1234 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 PNMA8AQ86V59 439 aaPredicted RBP13.93□□□□□ -0.18
SRRT-211ENST00000478693 GPATCH3Q96I76 525 aa13.93□□□□□ -0.18
SRRT-211ENST00000478693 RBM5P52756 815 aaKnown RBP eCLIP13.92□□□□□ -0.18
SRRT-211ENST00000478693 TBC1D10BQ4KMP7 808 aaPredicted RBP13.92□□□□□ -0.18
SRRT-211ENST00000478693 SAMD7Q7Z3H4 446 aa13.92□□□□□ -0.18
SRRT-211ENST00000478693 ZGPATQ8N5A5 531 aaKnown RBP13.92□□□□□ -0.18
SRRT-211ENST00000478693 CERS5Q8N5B7 392 aa13.92□□□□□ -0.18
SRRT-211ENST00000478693 SPATA5Q8NB90 893 aa13.92□□□□□ -0.18
SRRT-211ENST00000478693 ABCF2Q9UG63 623 aa13.92□□□□□ -0.18
SRRT-211ENST00000478693 SCN4AP35499 1836 aa13.92□□□□□ -0.18
SRRT-211ENST00000478693 MAST3O60307 1309 aa13.91□□□□□ -0.18
SRRT-211ENST00000478693 MCAMP43121 646 aa13.91□□□□□ -0.18
SRRT-211ENST00000478693 B4GALNT3Q6L9W6 998 aa13.91□□□□□ -0.18
SRRT-211ENST00000478693 USP50Q70EL3 339 aaPredicted RBP13.91□□□□□ -0.18
SRRT-211ENST00000478693 TRPM4Q8TD43 1214 aa13.91□□□□□ -0.18
SRRT-211ENST00000478693 GMLQ99445 158 aa13.91□□□□□ -0.18
SRRT-211ENST00000478693 MYOZ2Q9NPC6 264 aa13.91□□□□□ -0.18
SRRT-211ENST00000478693 SNRKQ9NRH2 765 aa13.91□□□□□ -0.18
SRRT-211ENST00000478693 HMG20BQ9P0W2 317 aa13.91□□□□□ -0.18
SRRT-211ENST00000478693 TTF2Q9UNY4 1162 aaKnown RBP13.91□□□□□ -0.18
SRRT-211ENST00000478693 PDS5AQ29RF7 1337 aaKnown RBP13.9□□□□□ -0.18
SRRT-211ENST00000478693 MYH13Q9UKX3 1938 aa13.9□□□□□ -0.18
SRRT-211ENST00000478693 IGHDP01880 384 aa13.9□□□□□ -0.18
SRRT-211ENST00000478693 LDHBP07195 334 aaKnown RBP13.9□□□□□ -0.18
SRRT-211ENST00000478693 SCARF1Q14162 830 aa13.9□□□□□ -0.18
SRRT-211ENST00000478693 PI16Q6UXB8 463 aa13.9□□□□□ -0.18
SRRT-211ENST00000478693 LDHDQ86WU2 507 aa13.9□□□□□ -0.18
SRRT-211ENST00000478693 DZIP1Q86YF9 867 aaKnown RBP13.9□□□□□ -0.18
SRRT-211ENST00000478693 ZNF646O15015 1829 aaPredicted RBP13.9□□□□□ -0.18
SRRT-211ENST00000478693 TOMM70O94826 608 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 POTEIP0CG38 1075 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 POTEJP0CG39 1038 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 PRDX5P30044 214 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 MMP14P50281 582 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 ZNF280AP59817 542 aaPredicted RBP13.89□□□□□ -0.19
SRRT-211ENST00000478693 DLGAP5Q15398 846 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 SPTY2D1Q68D10 685 aaPredicted RBP13.89□□□□□ -0.19
SRRT-211ENST00000478693 SMC1BQ8NDV3 1235 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 DNAJC2Q99543 621 aaKnown RBP13.89□□□□□ -0.19
SRRT-211ENST00000478693 SUGT1Q9Y2Z0 365 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 SALL1Q9NSC2 1324 aa13.89□□□□□ -0.19
SRRT-211ENST00000478693 EGFRP00533 1210 aa13.88□□□□□ -0.19
SRRT-211ENST00000478693 ZAP70P43403 619 aa13.88□□□□□ -0.19
SRRT-211ENST00000478693 CFAP100Q494V2 611 aa13.88□□□□□ -0.19
SRRT-211ENST00000478693 ERICH6Q7L0X2 663 aa13.88□□□□□ -0.19
SRRT-211ENST00000478693 RBM46Q8TBY0 533 aaKnown RBP13.88□□□□□ -0.19
SRRT-211ENST00000478693 ZNF512BQ96KM6 892 aaPredicted RBP13.88□□□□□ -0.19
SRRT-211ENST00000478693 LNPKQ9C0E8 428 aa13.88□□□□□ -0.19
SRRT-211ENST00000478693 RAI14Q9P0K7 980 aa13.88□□□□□ -0.19
SRRT-211ENST00000478693 LRP2BPQ9P2M1 347 aa13.88□□□□□ -0.19
SRRT-211ENST00000478693 MYO1BO43795 1136 aa13.87□□□□□ -0.19
SRRT-211ENST00000478693 CRKP46108 304 aa13.87□□□□□ -0.19
SRRT-211ENST00000478693 GRIK5Q16478 980 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms