RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 A0A1B0GUL7 405 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 H7C1D1 291 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 SASH1O94885 1247 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 RPS12P25398 132 aaKnown RBP8.52□□□□□ -1.05
BRCA1-215ENST00000478531 TIMM10P62072 90 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 IRX6P78412 446 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-215ENST00000478531 TBC1D10BQ4KMP7 808 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-215ENST00000478531 STRIP1Q5VSL9 837 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 SIRT2Q8IXJ6 389 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 RPAP2Q8IXW5 612 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-215ENST00000478531 ADARB2Q9NS39 739 aaKnown RBP8.52□□□□□ -1.05
BRCA1-215ENST00000478531 AKAP2Q9Y2D5 859 aa8.52□□□□□ -1.05
BRCA1-215ENST00000478531 COL1A1P02452 1464 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-215ENST00000478531 F8W031 263 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-215ENST00000478531 RBM26Q5T8P6 1007 aaKnown RBP8.51□□□□□ -1.05
BRCA1-215ENST00000478531 SAMD7Q7Z3H4 446 aa8.51□□□□□ -1.05
BRCA1-215ENST00000478531 FBXO33Q7Z6M2 555 aa8.51□□□□□ -1.05
BRCA1-215ENST00000478531 PNMA8AQ86V59 439 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-215ENST00000478531 KIAA0825Q8IV33 1275 aa8.51□□□□□ -1.05
BRCA1-215ENST00000478531 SMC1BQ8NDV3 1235 aa8.51□□□□□ -1.05
BRCA1-215ENST00000478531 AGBL3Q8NEM8 1001 aa8.51□□□□□ -1.05
BRCA1-215ENST00000478531 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
BRCA1-215ENST00000478531 TRPM4Q8TD43 1214 aa8.51□□□□□ -1.05
BRCA1-215ENST00000478531 DPF2Q92785 391 aa8.51□□□□□ -1.05
BRCA1-215ENST00000478531 U3KPZ7 1027 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-215ENST00000478531 ECM29Q5VYK3 1845 aa8.51□□□□□ -1.05
BRCA1-215ENST00000478531 MYO3BQ8WXR4 1341 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 EGFRP00533 1210 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 USP17L8P0C7I0 530 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 PHKA1P46020 1223 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 C1QTNF8P60827 252 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 MFSD14BQ5SR56 506 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 GORABQ5T7V8 394 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 LDHDQ86WU2 507 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 CERS5Q8N5B7 392 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 TDRD7Q8NHU6 1098 aaKnown RBP8.5□□□□□ -1.05
BRCA1-215ENST00000478531 XAGE2Q96GT9 111 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
BRCA1-215ENST00000478531 MYCNP04198 464 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-215ENST00000478531 KIF4BQ2VIQ3 1234 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 TNNI3KQ59H18 835 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 CCDC102BQ68D86 513 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 USP50Q70EL3 339 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-215ENST00000478531 ERC1Q8IUD2 1116 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 OGFOD1Q8N543 542 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 GMLQ99445 158 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 GNL3LQ9NVN8 582 aaKnown RBP8.5□□□□□ -1.05
BRCA1-215ENST00000478531 FPGT-TNNI3KV9GXZ4 949 aa8.5□□□□□ -1.05
BRCA1-215ENST00000478531 MYO5AQ9Y4I1 1855 aaKnown RBP8.49□□□□□ -1.05
BRCA1-215ENST00000478531 HSP90AB4PQ58FF6 505 aa8.49□□□□□ -1.05
BRCA1-215ENST00000478531 MAP1SQ66K74 1059 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-215ENST00000478531 CHADLQ6NUI6 762 aa8.49□□□□□ -1.05
BRCA1-215ENST00000478531 EXOC6Q8TAG9 804 aa8.49□□□□□ -1.05
BRCA1-215ENST00000478531 IL1RAPL2Q9NP60 686 aa8.49□□□□□ -1.05
BRCA1-215ENST00000478531 MYOZ2Q9NPC6 264 aa8.49□□□□□ -1.05
BRCA1-215ENST00000478531 PCDHB15Q9Y5E8 787 aa8.49□□□□□ -1.05
BRCA1-215ENST00000478531 FAM205AQ6ZU69 1335 aa8.49□□□□□ -1.05
BRCA1-215ENST00000478531 TRPM7Q96QT4 1865 aa8.49□□□□□ -1.05
BRCA1-215ENST00000478531 AKAP11Q9UKA4 1901 aa8.48□□□□□ -1.05
BRCA1-215ENST00000478531 MYH2Q9UKX2 1941 aa8.48□□□□□ -1.05
BRCA1-215ENST00000478531 HIRAP54198 1017 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-215ENST00000478531 DBNDD2Q9BQY9 259 aa8.48□□□□□ -1.05
BRCA1-215ENST00000478531 CCDC8Q9H0W5 538 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-215ENST00000478531 TLR7Q9NYK1 1049 aaKnown RBP8.48□□□□□ -1.05
BRCA1-215ENST00000478531 HDAC9Q9UKV0 1011 aa8.48□□□□□ -1.05
BRCA1-215ENST00000478531 RBM5P52756 815 aaKnown RBP eCLIP8.48□□□□□ -1.05
BRCA1-215ENST00000478531 ZNF280AP59817 542 aaPredicted RBP8.48□□□□□ -1.05
BRCA1-215ENST00000478531 FSTL1Q12841 308 aa8.48□□□□□ -1.05
BRCA1-215ENST00000478531 RASGRF1Q13972 1273 aa8.48□□□□□ -1.05
BRCA1-215ENST00000478531 AACSQ86V21 672 aa8.48□□□□□ -1.05
BRCA1-215ENST00000478531 RHPN1Q8TCX5 695 aa8.48□□□□□ -1.05
BRCA1-215ENST00000478531 ASTN2O75129 1339 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-215ENST00000478531 GRIK5Q16478 980 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 TTC39AQ5SRH9 613 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 PI16Q6UXB8 463 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 TBC1D22AQ8WUA7 517 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 EAF2Q96CJ1 260 aaPredicted RBP8.47□□□□□ -1.05
BRCA1-215ENST00000478531 KIF1BPQ96EK5 621 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 GPR108Q9NPR9 543 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 GGA3Q9NZ52 723 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 DBNLQ9UJU6 430 aaKnown RBP8.47□□□□□ -1.05
BRCA1-215ENST00000478531 DENND2AQ9ULE3 1009 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 TTF2Q9UNY4 1162 aaKnown RBP8.47□□□□□ -1.05
BRCA1-215ENST00000478531 PCDHAC2Q9Y5I4 1007 aa8.47□□□□□ -1.05
BRCA1-215ENST00000478531 SMARCA5O60264 1052 aaPredicted RBP8.46□□□□□ -1.05
BRCA1-215ENST00000478531 RAB11FIP3O75154 756 aa8.46□□□□□ -1.05
BRCA1-215ENST00000478531 FKBP1AP62942 108 aaKnown RBP8.46□□□□□ -1.05
BRCA1-215ENST00000478531 SCARF1Q14162 830 aa8.46□□□□□ -1.05
BRCA1-215ENST00000478531 NBPF9Q3BBW0 867 aa8.46□□□□□ -1.05
BRCA1-215ENST00000478531 CNTROBQ8N137 903 aa8.46□□□□□ -1.05
BRCA1-215ENST00000478531 CLASRPQ8N2M8 674 aaKnown RBP8.46□□□□□ -1.05
BRCA1-215ENST00000478531 WDR66Q8TBY9 1149 aa8.46□□□□□ -1.05
BRCA1-215ENST00000478531 SCAF8Q9UPN6 1271 aaKnown RBP8.46□□□□□ -1.05
BRCA1-215ENST00000478531 MAST2Q6P0Q8 1798 aa8.46□□□□□ -1.05
BRCA1-215ENST00000478531 TRAF5O00463 557 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 SEMA3EO15041 775 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 IFIT2P09913 472 aaKnown RBP8.46□□□□□ -1.06
BRCA1-215ENST00000478531 ARID4AP29374 1257 aaPredicted RBP8.46□□□□□ -1.06
BRCA1-215ENST00000478531 PRDX5P30044 214 aa8.46□□□□□ -1.06
BRCA1-215ENST00000478531 MCAMP43121 646 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms