RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 COL26A1Q96A83 441 aa6.21□□□□□ -1.42
PTCD3-212ENST00000477520 LACRTQ9GZZ8 138 aa6.21□□□□□ -1.42
PTCD3-212ENST00000477520 ZMYND15Q9H091 742 aa6.21□□□□□ -1.42
PTCD3-212ENST00000477520 MUC3BQ9H195 1237 aa6.21□□□□□ -1.42
PTCD3-212ENST00000477520 VPS8Q8N3P4 1428 aa6.21□□□□□ -1.42
PTCD3-212ENST00000477520 CASKIN1Q8WXD9 1431 aa6.21□□□□□ -1.42
PTCD3-212ENST00000477520 ABCC2Q92887 1545 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 RAD21O60216 631 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 PPP1R15AO75807 674 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-212ENST00000477520 NEFMP07197 916 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 CDC25BP30305 580 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 ITGAEP38570 1179 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 ATP11AP98196 1134 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 TRIP4Q15650 581 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-212ENST00000477520 KANK4Q5T7N3 995 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-212ENST00000477520 FAM20CQ8IXL6 584 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 UBASH3BQ8TF42 649 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 FOXD4L4Q8WXT5 416 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-212ENST00000477520 RBSNQ9H1K0 784 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 HECW1Q76N89 1606 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 RAPGEF6Q8TEU7 1601 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 PLB1Q6P1J6 1458 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 FYCO1Q9BQS8 1478 aa6.2□□□□□ -1.42
PTCD3-212ENST00000477520 CENPJQ9HC77 1338 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-212ENST00000477520 ABCA8O94911 1581 aa6.19□□□□□ -1.42
PTCD3-212ENST00000477520 ADAM11O75078 769 aa6.19□□□□□ -1.42
PTCD3-212ENST00000477520 NCLP19338 710 aaKnown RBP6.19□□□□□ -1.42
PTCD3-212ENST00000477520 OGFOD2Q6N063 350 aa6.19□□□□□ -1.42
PTCD3-212ENST00000477520 ANKMY2Q8IV38 441 aa6.19□□□□□ -1.42
PTCD3-212ENST00000477520 CACTIN-AS1Q8N1I8 211 aa6.19□□□□□ -1.42
PTCD3-212ENST00000477520 CCDC18Q5T9S5 1454 aa6.19□□□□□ -1.42
PTCD3-212ENST00000477520 PLEKHD1A6NEE1 506 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L15C9J2P7 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L10C9JJH3 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L13C9JLJ4 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L12C9JPN9 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L11C9JVI0 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L21D6R901 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L18D6R9N7 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L22D6RA61 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L17D6RBQ6 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L19D6RCP7 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L20D6RJB6 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 FOXO3O43524 673 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 USP17L24Q0WX57 530 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 DUOXA2Q1HG44 320 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 TPRNQ4KMQ1 711 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 CLEC10AQ8IUN9 316 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 ARXQ96QS3 562 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 FAM83CQ9BQN1 747 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 KRTAP4-2Q9BYR5 136 aa6.18□□□□□ -1.42
PTCD3-212ENST00000477520 ADCY10Q96PN6 1610 aa6.17□□□□□ -1.42
PTCD3-212ENST00000477520 NUP153P49790 1475 aaKnown RBP6.17□□□□□ -1.42
PTCD3-212ENST00000477520 KDM5BQ9UGL1 1544 aa6.17□□□□□ -1.42
PTCD3-212ENST00000477520 WDR64B1ANS9 1081 aa6.17□□□□□ -1.42
PTCD3-212ENST00000477520 TCERG1O14776 1098 aaKnown RBP6.17□□□□□ -1.42
PTCD3-212ENST00000477520 FSCN2O14926 492 aa6.17□□□□□ -1.42
PTCD3-212ENST00000477520 BMP3P12645 472 aa6.17□□□□□ -1.42
PTCD3-212ENST00000477520 HSP90AA2PQ14568 343 aaPredicted RBP6.17□□□□□ -1.42
PTCD3-212ENST00000477520 ZNF326Q5BKZ1 582 aaKnown RBP6.17□□□□□ -1.42
PTCD3-212ENST00000477520 COX20Q5RI15 118 aa6.17□□□□□ -1.42
PTCD3-212ENST00000477520 CEP135Q66GS9 1140 aa6.17□□□□□ -1.42
PTCD3-212ENST00000477520 BEND4Q6ZU67 534 aa6.17□□□□□ -1.42
PTCD3-212ENST00000477520 PCF11O94913 1555 aaKnown RBP6.17□□□□□ -1.42
PTCD3-212ENST00000477520 ATP10BO94823 1461 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 EPRSP07814 1512 aaKnown RBP6.16□□□□□ -1.42
PTCD3-212ENST00000477520 ARID3CA6NKF2 412 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 EPHA1P21709 976 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 CDC27P30260 824 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 PREPP48147 710 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 FAM26DQ5JW98 314 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 L1TD1Q5T7N2 865 aaKnown RBP6.16□□□□□ -1.42
PTCD3-212ENST00000477520 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 NFXL1Q6ZNB6 911 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.16□□□□□ -1.42
PTCD3-212ENST00000477520 NLRP13Q86W25 1043 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 ETFBKMTQ8IXQ9 262 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 OR13H1Q8NG92 308 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 VTI1AQ96AJ9 217 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 KLHDC7BQ96G42 594 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 RASSF4Q9H2L5 321 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 KCNF1Q9H3M0 494 aa6.16□□□□□ -1.42
PTCD3-212ENST00000477520 MAP3K1Q13233 1512 aa6.15□□□□□ -1.42
PTCD3-212ENST00000477520 FAM196BA6NMK8 535 aa6.15□□□□□ -1.42
PTCD3-212ENST00000477520 HSP90AA1P07900 732 aaKnown RBP6.15□□□□□ -1.42
PTCD3-212ENST00000477520 GLMNQ92990 594 aa6.15□□□□□ -1.42
PTCD3-212ENST00000477520 SH2B1Q9NRF2 756 aaPredicted RBP6.15□□□□□ -1.42
PTCD3-212ENST00000477520 RRBP1Q9P2E9 1410 aaKnown RBP6.15□□□□□ -1.43
PTCD3-212ENST00000477520 ZCCHC11Q5TAX3 1644 aaKnown RBP6.14□□□□□ -1.43
PTCD3-212ENST00000477520 C8AP07357 584 aa6.14□□□□□ -1.43
PTCD3-212ENST00000477520 CBLL1Q75N03 491 aa6.14□□□□□ -1.43
PTCD3-212ENST00000477520 KLHL23Q8NBE8 558 aa6.14□□□□□ -1.43
PTCD3-212ENST00000477520 MFSD14AQ96MC6 490 aa6.14□□□□□ -1.43
PTCD3-212ENST00000477520 MTUS2Q5JR59 1369 aa6.14□□□□□ -1.43
PTCD3-212ENST00000477520 MAPKBP1O60336 1514 aa6.14□□□□□ -1.43
PTCD3-212ENST00000477520 CDK13Q14004 1512 aaKnown RBP6.14□□□□□ -1.43
PTCD3-212ENST00000477520 SMNDC1O75940 238 aaKnown RBP eCLIP6.13□□□□□ -1.43
PTCD3-212ENST00000477520 CALD1Q05682 793 aaKnown RBP6.13□□□□□ -1.43
PTCD3-212ENST00000477520 HYAL2Q12891 473 aa6.13□□□□□ -1.43
PTCD3-212ENST00000477520 FKBP5Q13451 457 aaPredicted RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms