RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 CNNM1Q9NRU3 951 aa16.6■□□□□ 0.25
SRSF3-203ENST00000477442 SAGE1Q9NXZ1 904 aa16.6■□□□□ 0.25
SRSF3-203ENST00000477442 HDAC9Q9UKV0 1011 aa16.6■□□□□ 0.25
SRSF3-203ENST00000477442 AKAP11Q9UKA4 1901 aa16.59■□□□□ 0.25
SRSF3-203ENST00000477442 NBPF7P0C2Y1 421 aaPredicted RBP16.59■□□□□ 0.25
SRSF3-203ENST00000477442 IL1R1P14778 569 aa16.59■□□□□ 0.25
SRSF3-203ENST00000477442 ZNF804AQ7Z570 1209 aa16.59■□□□□ 0.25
SRSF3-203ENST00000477442 PTPN12Q05209 780 aaKnown RBP16.58■□□□□ 0.24
SRSF3-203ENST00000477442 DLGAP5Q15398 846 aa16.58■□□□□ 0.24
SRSF3-203ENST00000477442 MRPL50Q8N5N7 158 aaKnown RBP16.58■□□□□ 0.24
SRSF3-203ENST00000477442 CLRN2A0PK11 232 aa16.57■□□□□ 0.24
SRSF3-203ENST00000477442 NF2P35240 595 aa16.57■□□□□ 0.24
SRSF3-203ENST00000477442 GYG1P46976 350 aa16.57■□□□□ 0.24
SRSF3-203ENST00000477442 APOBEC3FQ8IUX4 373 aaKnown RBP16.57■□□□□ 0.24
SRSF3-203ENST00000477442 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.57■□□□□ 0.24
SRSF3-203ENST00000477442 SSC5DA1L4H1 1573 aa16.56■□□□□ 0.24
SRSF3-203ENST00000477442 TBC1D8O95759 1140 aa16.56■□□□□ 0.24
SRSF3-203ENST00000477442 CFAP100Q494V2 611 aa16.56■□□□□ 0.24
SRSF3-203ENST00000477442 PRMT6Q96LA8 375 aaPredicted RBP16.56■□□□□ 0.24
SRSF3-203ENST00000477442 DEFB129Q9H1M3 183 aa16.56■□□□□ 0.24
SRSF3-203ENST00000477442 BICC1Q9H694 974 aaKnown RBP16.56■□□□□ 0.24
SRSF3-203ENST00000477442 ANGEL1Q9UNK9 670 aaKnown RBP16.56■□□□□ 0.24
SRSF3-203ENST00000477442 ANKRD44Q8N8A2 993 aa16.55■□□□□ 0.24
SRSF3-203ENST00000477442 UTYO14607 1347 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 SPDYE2BA6NHP3 402 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 SPDYE6P0CI01 402 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 MMP14P50281 582 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 LDLRAD1Q5T700 205 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 MTMR14Q8NCE2 650 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 TDRD7Q8NHU6 1098 aaKnown RBP16.54■□□□□ 0.24
SRSF3-203ENST00000477442 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 FAM84BQ96KN1 310 aaPredicted RBP16.54■□□□□ 0.24
SRSF3-203ENST00000477442 RIPOR2Q9Y4F9 1068 aa16.54■□□□□ 0.24
SRSF3-203ENST00000477442 FAM205AQ6ZU69 1335 aa16.53■□□□□ 0.24
SRSF3-203ENST00000477442 RBM5P52756 815 aaKnown RBP eCLIP16.53■□□□□ 0.24
SRSF3-203ENST00000477442 UBE4AQ14139 1066 aa16.53■□□□□ 0.24
SRSF3-203ENST00000477442 GRIK5Q16478 980 aa16.53■□□□□ 0.24
SRSF3-203ENST00000477442 ARMC9Q7Z3E5 817 aa16.53■□□□□ 0.24
SRSF3-203ENST00000477442 KLHDC4Q8TBB5 520 aa16.53■□□□□ 0.24
SRSF3-203ENST00000477442 CDCA7LQ96GN5 454 aa16.53■□□□□ 0.24
SRSF3-203ENST00000477442 CLMNQ96JQ2 1002 aa16.53■□□□□ 0.24
SRSF3-203ENST00000477442 VEZTQ9HBM0 779 aa16.53■□□□□ 0.24
SRSF3-203ENST00000477442 IQSEC3Q9UPP2 1182 aaPredicted RBP16.53■□□□□ 0.24
SRSF3-203ENST00000477442 ECM29Q5VYK3 1845 aa16.52■□□□□ 0.24
SRSF3-203ENST00000477442 HIBADHP31937 336 aaKnown RBP16.52■□□□□ 0.24
SRSF3-203ENST00000477442 RGS19P49795 217 aa16.52■□□□□ 0.24
SRSF3-203ENST00000477442 FKBP1AP62942 108 aaKnown RBP16.52■□□□□ 0.24
SRSF3-203ENST00000477442 MLLT1Q03111 559 aaPredicted RBP16.52■□□□□ 0.24
SRSF3-203ENST00000477442 RABL6Q3YEC7 729 aaPredicted RBP16.52■□□□□ 0.24
SRSF3-203ENST00000477442 MFSD14BQ5SR56 506 aa16.52■□□□□ 0.24
SRSF3-203ENST00000477442 SPRYD7Q5W111 196 aa16.52■□□□□ 0.24
SRSF3-203ENST00000477442 REM2Q8IYK8 340 aaPredicted RBP16.52■□□□□ 0.24
SRSF3-203ENST00000477442 R3HDMLQ9H3Y0 253 aa16.52■□□□□ 0.24
SRSF3-203ENST00000477442 COL1A1P02452 1464 aaPredicted RBP16.51■□□□□ 0.23
SRSF3-203ENST00000477442 E9PSI1 815 aa16.51■□□□□ 0.23
SRSF3-203ENST00000477442 TM4SF4P48230 202 aa16.51■□□□□ 0.23
SRSF3-203ENST00000477442 SLFN5Q08AF3 891 aa16.51■□□□□ 0.23
SRSF3-203ENST00000477442 NBPF12Q5TAG4 269 aaPredicted RBP16.51■□□□□ 0.23
SRSF3-203ENST00000477442 ZNF296Q8WUU4 475 aaPredicted RBP16.51■□□□□ 0.23
SRSF3-203ENST00000477442 SOX10P56693 466 aa16.5■□□□□ 0.23
SRSF3-203ENST00000477442 CTU1Q7Z7A3 348 aaKnown RBP16.5■□□□□ 0.23
SRSF3-203ENST00000477442 CDAN1Q8IWY9 1227 aa16.5■□□□□ 0.23
SRSF3-203ENST00000477442 USP44Q9H0E7 712 aa16.5■□□□□ 0.23
SRSF3-203ENST00000477442 TDRD3Q9H7E2 651 aaKnown RBP16.5■□□□□ 0.23
SRSF3-203ENST00000477442 TTF2Q9UNY4 1162 aaKnown RBP16.5■□□□□ 0.23
SRSF3-203ENST00000477442 MYO1BO43795 1136 aa16.49■□□□□ 0.23
SRSF3-203ENST00000477442 CHAF1AQ13111 956 aaPredicted RBP16.49■□□□□ 0.23
SRSF3-203ENST00000477442 RASA3Q14644 834 aa16.49■□□□□ 0.23
SRSF3-203ENST00000477442 METTL24Q5JXM2 366 aa16.49■□□□□ 0.23
SRSF3-203ENST00000477442 ZNF70Q9UC06 446 aaPredicted RBP16.49■□□□□ 0.23
SRSF3-203ENST00000477442 PPP2R3BQ9Y5P8 575 aa16.49■□□□□ 0.23
SRSF3-203ENST00000477442 PTPRCP08575 1304 aa16.48■□□□□ 0.23
SRSF3-203ENST00000477442 MROH5Q6ZUA9 1318 aa16.48■□□□□ 0.23
SRSF3-203ENST00000477442 MAP3K11Q16584 847 aa16.48■□□□□ 0.23
SRSF3-203ENST00000477442 FBXO33Q7Z6M2 555 aa16.48■□□□□ 0.23
SRSF3-203ENST00000477442 VGLL2Q8N8G2 317 aa16.48■□□□□ 0.23
SRSF3-203ENST00000477442 SLC10A4Q96EP9 437 aa16.48■□□□□ 0.23
SRSF3-203ENST00000477442 ARAP2Q8WZ64 1704 aa16.48■□□□□ 0.23
SRSF3-203ENST00000477442 GPR25O00155 361 aa16.47■□□□□ 0.23
SRSF3-203ENST00000477442 PPP1R12BO60237 982 aaPredicted RBP16.47■□□□□ 0.23
SRSF3-203ENST00000477442 USP2O75604 605 aaPredicted RBP16.47■□□□□ 0.23
SRSF3-203ENST00000477442 GJA5P36382 358 aa16.47■□□□□ 0.23
SRSF3-203ENST00000477442 SREBF2Q12772 1141 aa16.47■□□□□ 0.23
SRSF3-203ENST00000477442 SPDYE2Q495Y8 402 aa16.47■□□□□ 0.23
SRSF3-203ENST00000477442 WNK4Q96J92 1243 aa16.47■□□□□ 0.23
SRSF3-203ENST00000477442 TCP10L2B9ZVM9 353 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 PDE8BO95263 885 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 CRKP46108 304 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 BCAMP50895 628 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 SUPT20HL1Q3ZLR7 823 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 VPS37DQ86XT2 251 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 DZIP1LQ8IYY4 767 aaKnown RBP16.46■□□□□ 0.23
SRSF3-203ENST00000477442 SMC4Q9NTJ3 1288 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 SERPINA10Q9UK55 444 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 HPS5Q9UPZ3 1129 aa16.46■□□□□ 0.23
SRSF3-203ENST00000477442 TNRC18O15417 2968 aaPredicted RBP16.45■□□□□ 0.22
SRSF3-203ENST00000477442 IGF2BP3O00425 579 aaKnown RBP eCLIP16.45■□□□□ 0.22
SRSF3-203ENST00000477442 RFX5P48382 616 aaPredicted RBP16.45■□□□□ 0.22
SRSF3-203ENST00000477442 CACNB3P54284 484 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 298.2 ms