RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 PPP2R3BQ9Y5P8 575 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 F6X3S4 739 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 GPR25O00155 361 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 SNAP23O00161 211 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 IL1R1P14778 569 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 FKBP1AP62942 108 aaKnown RBP13.75□□□□□ -0.21
CDRT1-205ENST00000475944 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 SPRYD7Q5W111 196 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 CERS5Q8N5B7 392 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 CFHR5Q9BXR6 569 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 A0A1B0GUL6 1792 aa13.75□□□□□ -0.21
CDRT1-205ENST00000475944 ECM29Q5VYK3 1845 aa13.74□□□□□ -0.21
CDRT1-205ENST00000475944 GRM8O00222 908 aa13.74□□□□□ -0.21
CDRT1-205ENST00000475944 ANP32CO43423 234 aa13.74□□□□□ -0.21
CDRT1-205ENST00000475944 PPP1R12BO60237 982 aaPredicted RBP13.74□□□□□ -0.21
CDRT1-205ENST00000475944 ALDH1A1P00352 501 aa13.74□□□□□ -0.21
CDRT1-205ENST00000475944 LMBR1LQ6UX01 489 aa13.74□□□□□ -0.21
CDRT1-205ENST00000475944 LDHAL6AQ6ZMR3 332 aa13.74□□□□□ -0.21
CDRT1-205ENST00000475944 SLC10A4Q96EP9 437 aa13.74□□□□□ -0.21
CDRT1-205ENST00000475944 CNNM1Q9NRU3 951 aa13.74□□□□□ -0.21
CDRT1-205ENST00000475944 SPDYE2BA6NHP3 402 aa13.73□□□□□ -0.21
CDRT1-205ENST00000475944 MANSC4A6NHS7 340 aaPredicted RBP13.73□□□□□ -0.21
CDRT1-205ENST00000475944 F8W031 263 aaPredicted RBP13.73□□□□□ -0.21
CDRT1-205ENST00000475944 FKTNO75072 461 aa13.73□□□□□ -0.21
CDRT1-205ENST00000475944 SPDYE6P0CI01 402 aa13.73□□□□□ -0.21
CDRT1-205ENST00000475944 INHBEP58166 350 aa13.73□□□□□ -0.21
CDRT1-205ENST00000475944 MAP3K11Q16584 847 aa13.73□□□□□ -0.21
CDRT1-205ENST00000475944 SUPT20HL1Q3ZLR7 823 aa13.73□□□□□ -0.21
CDRT1-205ENST00000475944 CFAP100Q494V2 611 aa13.73□□□□□ -0.21
CDRT1-205ENST00000475944 C9orf78Q9NZ63 289 aaPredicted RBP13.73□□□□□ -0.21
CDRT1-205ENST00000475944 CLRN2A0PK11 232 aa13.72□□□□□ -0.21
CDRT1-205ENST00000475944 UNCXA6NJT0 531 aa13.72□□□□□ -0.21
CDRT1-205ENST00000475944 PLIN1O60240 522 aa13.72□□□□□ -0.21
CDRT1-205ENST00000475944 ZBTB48P10074 688 aaPredicted RBP13.72□□□□□ -0.21
CDRT1-205ENST00000475944 FBXO46Q6PJ61 603 aaPredicted RBP13.72□□□□□ -0.21
CDRT1-205ENST00000475944 VEZTQ9HBM0 779 aa13.72□□□□□ -0.21
CDRT1-205ENST00000475944 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
CDRT1-205ENST00000475944 SSC5DA1L4H1 1573 aa13.71□□□□□ -0.21
CDRT1-205ENST00000475944 ALDH1L1O75891 902 aa13.71□□□□□ -0.21
CDRT1-205ENST00000475944 RBM5P52756 815 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDRT1-205ENST00000475944 EPHA10Q5JZY3 1008 aa13.71□□□□□ -0.21
CDRT1-205ENST00000475944 ZNF594Q96JF6 807 aaPredicted RBP13.71□□□□□ -0.21
CDRT1-205ENST00000475944 PRMT6Q96LA8 375 aaPredicted RBP13.71□□□□□ -0.21
CDRT1-205ENST00000475944 PCDHAC2Q9Y5I4 1007 aa13.71□□□□□ -0.21
CDRT1-205ENST00000475944 FAM205AQ6ZU69 1335 aa13.7□□□□□ -0.22
CDRT1-205ENST00000475944 IREB2P48200 963 aaKnown RBP13.7□□□□□ -0.22
CDRT1-205ENST00000475944 TNFAIP1Q13829 316 aa13.7□□□□□ -0.22
CDRT1-205ENST00000475944 UBE4AQ14139 1066 aa13.7□□□□□ -0.22
CDRT1-205ENST00000475944 SLC4A10Q6U841 1118 aa13.7□□□□□ -0.22
CDRT1-205ENST00000475944 IFNL1Q8IU54 200 aa13.7□□□□□ -0.22
CDRT1-205ENST00000475944 WNK4Q96J92 1243 aa13.7□□□□□ -0.22
CDRT1-205ENST00000475944 SRCIN1Q9C0H9 1055 aa13.7□□□□□ -0.22
CDRT1-205ENST00000475944 SPINK5Q9NQ38 1064 aaPredicted RBP13.7□□□□□ -0.22
CDRT1-205ENST00000475944 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.7□□□□□ -0.22
CDRT1-205ENST00000475944 JAG2Q9Y219 1238 aa13.7□□□□□ -0.22
CDRT1-205ENST00000475944 LAMB1P07942 1786 aa13.69□□□□□ -0.22
CDRT1-205ENST00000475944 MFSD14BQ5SR56 506 aa13.69□□□□□ -0.22
CDRT1-205ENST00000475944 NBPF12Q5TAG4 269 aaPredicted RBP13.69□□□□□ -0.22
CDRT1-205ENST00000475944 TDRD7Q8NHU6 1098 aaKnown RBP13.69□□□□□ -0.22
CDRT1-205ENST00000475944 CLMNQ96JQ2 1002 aa13.69□□□□□ -0.22
CDRT1-205ENST00000475944 R3HDMLQ9H3Y0 253 aa13.69□□□□□ -0.22
CDRT1-205ENST00000475944 SERPINA10Q9UK55 444 aa13.69□□□□□ -0.22
CDRT1-205ENST00000475944 TNRC18O15417 2968 aaPredicted RBP13.68□□□□□ -0.22
CDRT1-205ENST00000475944 HIBADHP31937 336 aaKnown RBP13.68□□□□□ -0.22
CDRT1-205ENST00000475944 RASA3Q14644 834 aa13.68□□□□□ -0.22
CDRT1-205ENST00000475944 OTUD7BQ6GQQ9 843 aa13.68□□□□□ -0.22
CDRT1-205ENST00000475944 ANKRD13AQ8IZ07 590 aa13.68□□□□□ -0.22
CDRT1-205ENST00000475944 TTF2Q9UNY4 1162 aaKnown RBP13.68□□□□□ -0.22
CDRT1-205ENST00000475944 ARAP2Q8WZ64 1704 aa13.67□□□□□ -0.22
CDRT1-205ENST00000475944 GYG1P46976 350 aa13.67□□□□□ -0.22
CDRT1-205ENST00000475944 SPDYE2Q495Y8 402 aa13.67□□□□□ -0.22
CDRT1-205ENST00000475944 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
CDRT1-205ENST00000475944 SUCLG2Q96I99 432 aa13.67□□□□□ -0.22
CDRT1-205ENST00000475944 AOX1Q06278 1338 aa13.66□□□□□ -0.22
CDRT1-205ENST00000475944 MROH5Q6ZUA9 1318 aa13.66□□□□□ -0.22
CDRT1-205ENST00000475944 IGF2BP3O00425 579 aaKnown RBP eCLIP13.66□□□□□ -0.22
CDRT1-205ENST00000475944 USP2O75604 605 aaPredicted RBP13.66□□□□□ -0.22
CDRT1-205ENST00000475944 TNNI2P48788 182 aa13.66□□□□□ -0.22
CDRT1-205ENST00000475944 VPS37DQ86XT2 251 aa13.66□□□□□ -0.22
CDRT1-205ENST00000475944 FAM84BQ96KN1 310 aaPredicted RBP13.66□□□□□ -0.22
CDRT1-205ENST00000475944 PUS3Q9BZE2 481 aaKnown RBP13.66□□□□□ -0.22
CDRT1-205ENST00000475944 TDRD3Q9H7E2 651 aaKnown RBP13.66□□□□□ -0.22
CDRT1-205ENST00000475944 ZNF70Q9UC06 446 aaPredicted RBP13.66□□□□□ -0.22
CDRT1-205ENST00000475944 TRIM17Q9Y577 477 aa13.66□□□□□ -0.22
CDRT1-205ENST00000475944 UTYO14607 1347 aa13.65□□□□□ -0.22
CDRT1-205ENST00000475944 OTOP1Q7RTM1 612 aa13.65□□□□□ -0.22
CDRT1-205ENST00000475944 DZIP1LQ8IYY4 767 aaKnown RBP13.65□□□□□ -0.22
CDRT1-205ENST00000475944 FAM9BQ8IZU0 186 aa13.65□□□□□ -0.22
CDRT1-205ENST00000475944 ERO1AQ96HE7 468 aa13.65□□□□□ -0.22
CDRT1-205ENST00000475944 KAZALD1Q96I82 304 aa13.65□□□□□ -0.22
CDRT1-205ENST00000475944 RIPOR2Q9Y4F9 1068 aa13.65□□□□□ -0.22
CDRT1-205ENST00000475944 FRAT2O75474 233 aaPredicted RBP13.64□□□□□ -0.23
CDRT1-205ENST00000475944 NBPF7P0C2Y1 421 aaPredicted RBP13.64□□□□□ -0.23
CDRT1-205ENST00000475944 GJA5P36382 358 aa13.64□□□□□ -0.23
CDRT1-205ENST00000475944 CRKP46108 304 aa13.64□□□□□ -0.23
CDRT1-205ENST00000475944 CRHR2Q13324 411 aa13.64□□□□□ -0.23
CDRT1-205ENST00000475944 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
CDRT1-205ENST00000475944 TBC1D22AQ8WUA7 517 aa13.64□□□□□ -0.23
CDRT1-205ENST00000475944 OPTNQ96CV9 577 aa13.64□□□□□ -0.23
CDRT1-205ENST00000475944 BICC1Q9H694 974 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms