RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 CST9Q5W186 159 aa14.37□□□□□ -0.11
HLA-DOB-208ENST00000475235 KRT26Q7Z3Y9 468 aa14.37□□□□□ -0.11
HLA-DOB-208ENST00000475235 RIPOR2Q9Y4F9 1068 aa14.37□□□□□ -0.11
HLA-DOB-208ENST00000475235 IL1R1P14778 569 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 FMR1Q06787 632 aaKnown RBP eCLIP14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 USP48Q86UV5 1035 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 SULF1Q8IWU6 871 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 PUS3Q9BZE2 481 aaKnown RBP14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 GGA3Q9NZ52 723 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 HDAC9Q9UKV0 1011 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 TLL2Q9Y6L7 1015 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 ZBED9Q6R2W3 1325 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 ECE1P42892 770 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 VEGFBP49765 207 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 SCARF1Q14162 830 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 METTL24Q5JXM2 366 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 INTS3Q68E01 1043 aaKnown RBP14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 ZNF408Q9H9D4 720 aa14.36□□□□□ -0.11
HLA-DOB-208ENST00000475235 PITPNM2Q9BZ72 1349 aa14.35□□□□□ -0.11
HLA-DOB-208ENST00000475235 FKBP1AP62942 108 aaKnown RBP14.35□□□□□ -0.11
HLA-DOB-208ENST00000475235 ATF7IPQ6VMQ6 1270 aa14.35□□□□□ -0.11
HLA-DOB-208ENST00000475235 HHIPL1Q96JK4 782 aa14.35□□□□□ -0.11
HLA-DOB-208ENST00000475235 MXD3Q9BW11 206 aa14.35□□□□□ -0.11
HLA-DOB-208ENST00000475235 SCN9AQ15858 1988 aa14.35□□□□□ -0.11
HLA-DOB-208ENST00000475235 PDE8BO95263 885 aa14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 GNAI3P08754 354 aa14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 HSPA1AP0DMV8 641 aaKnown RBP14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 HSPA1BP0DMV9 641 aaKnown RBP14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 HIBADHP31937 336 aaKnown RBP14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 LRRC24Q50LG9 513 aa14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 ANGEL2Q5VTE6 544 aaKnown RBP14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 SAPCD2Q86UD0 394 aa14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 FRAT1Q92837 279 aaPredicted RBP14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 WDR33Q9C0J8 1336 aaKnown RBP14.34□□□□□ -0.11
HLA-DOB-208ENST00000475235 ADM5C9JUS6 153 aa14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 EYA2O00167 538 aa14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 BCAR3O75815 825 aa14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 SASH1O94885 1247 aa14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 TRIM27P14373 513 aa14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 CAVIN4Q5BKX8 364 aa14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 PAXIP1Q6ZW49 1069 aaPredicted RBP14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 KIAA0825Q8IV33 1275 aa14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 KLHDC4Q8TBB5 520 aa14.33□□□□□ -0.12
HLA-DOB-208ENST00000475235 RFX5P48382 616 aaPredicted RBP14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 PTPN12Q05209 780 aaKnown RBP14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 ZKSCAN2Q63HK3 967 aa14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 VPS37DQ86XT2 251 aa14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 VGLL2Q8N8G2 317 aa14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 TDRD7Q8NHU6 1098 aaKnown RBP14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 MEIS3Q99687 375 aa14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 LRRFIP2Q9Y608 721 aaKnown RBP14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 PSME4Q14997 1843 aa14.32□□□□□ -0.12
HLA-DOB-208ENST00000475235 WNT10BO00744 389 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 GYG1P46976 350 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 PUM3Q15397 648 aaKnown RBP14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 C2orf69Q8N8R5 385 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 FAM84BQ96KN1 310 aaPredicted RBP14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 CAPNS2Q96L46 248 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 ASTN2O75129 1339 aaPredicted RBP14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 FAM205AQ6ZU69 1335 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 CIAO1O76071 339 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 IFIT1P09914 478 aaKnown RBP14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 MAP2K1Q02750 393 aaPredicted RBP14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 NBPF9Q3BBW0 867 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 CYP4F22Q6NT55 531 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 CERS5Q8N5B7 392 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 AIDAQ96BJ3 306 aa14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 GBA2Q9HCG7 927 aaPredicted RBP14.31□□□□□ -0.12
HLA-DOB-208ENST00000475235 HUNKP57058 714 aa14.3□□□□□ -0.12
HLA-DOB-208ENST00000475235 DLGAP5Q15398 846 aa14.3□□□□□ -0.12
HLA-DOB-208ENST00000475235 FBXO33Q7Z6M2 555 aa14.3□□□□□ -0.12
HLA-DOB-208ENST00000475235 MTMR14Q8NCE2 650 aa14.3□□□□□ -0.12
HLA-DOB-208ENST00000475235 CDCA5Q96FF9 252 aa14.3□□□□□ -0.12
HLA-DOB-208ENST00000475235 FRAT2O75474 233 aaPredicted RBP14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 SLC5A1P13866 664 aa14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 MAP2K2P36507 400 aa14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 IL15P40933 162 aaPredicted RBP14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 FKBP1BP68106 108 aa14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 MFSD14BQ5SR56 506 aa14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 DLK2Q6UY11 383 aa14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 APOBEC3FQ8IUX4 373 aaKnown RBP14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 LPIN2Q92539 896 aa14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 CLUAP1Q96AJ1 413 aa14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 COPRSQ9NQ92 184 aa14.29□□□□□ -0.12
HLA-DOB-208ENST00000475235 A0A1B0GUL6 1792 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 MYO1BO43795 1136 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 GNAI2P04899 355 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 FGFR2P21802 821 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 GRM1Q13255 1194 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 MTX1Q13505 466 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 ATG9AQ7Z3C6 839 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 TBC1D22AQ8WUA7 517 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 ZBED3Q96IU2 234 aaPredicted RBP14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 SIL1Q9H173 461 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 WBP1LQ9NX94 342 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 CEP126Q9P2H0 1117 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 JAG2Q9Y219 1238 aa14.28□□□□□ -0.12
HLA-DOB-208ENST00000475235 F8W031 263 aaPredicted RBP14.27□□□□□ -0.12
HLA-DOB-208ENST00000475235 SRGAP3O43295 1099 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms