RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 IL1R1P14778 569 aa18.22■□□□□ 0.51
COL2A1-205ENST00000474996 TM4SF4P48230 202 aa18.22■□□□□ 0.51
COL2A1-205ENST00000474996 CCDC57Q2TAC2 916 aa18.22■□□□□ 0.51
COL2A1-205ENST00000474996 TAF7LQ5H9L4 462 aa18.22■□□□□ 0.51
COL2A1-205ENST00000474996 LDHAL6AQ6ZMR3 332 aa18.22■□□□□ 0.51
COL2A1-205ENST00000474996 ANGEL1Q9UNK9 670 aaKnown RBP18.22■□□□□ 0.51
COL2A1-205ENST00000474996 FZD1Q9UP38 647 aa18.22■□□□□ 0.51
COL2A1-205ENST00000474996 JAG2Q9Y219 1238 aa18.22■□□□□ 0.51
COL2A1-205ENST00000474996 COL1A1P02452 1464 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-205ENST00000474996 SOX10P56693 466 aa18.21■□□□□ 0.51
COL2A1-205ENST00000474996 ZNF296Q8WUU4 475 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-205ENST00000474996 DEFB129Q9H1M3 183 aa18.21■□□□□ 0.51
COL2A1-205ENST00000474996 CNNM1Q9NRU3 951 aa18.21■□□□□ 0.51
COL2A1-205ENST00000474996 C9orf78Q9NZ63 289 aaPredicted RBP18.21■□□□□ 0.51
COL2A1-205ENST00000474996 CFAP100Q494V2 611 aa18.2■□□□□ 0.5
COL2A1-205ENST00000474996 LDLRAD1Q5T700 205 aa18.2■□□□□ 0.5
COL2A1-205ENST00000474996 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
COL2A1-205ENST00000474996 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
COL2A1-205ENST00000474996 MTMR14Q8NCE2 650 aa18.2■□□□□ 0.5
COL2A1-205ENST00000474996 TNRC18O15417 2968 aaPredicted RBP18.19■□□□□ 0.5
COL2A1-205ENST00000474996 CLRN2A0PK11 232 aa18.19■□□□□ 0.5
COL2A1-205ENST00000474996 SSC5DA1L4H1 1573 aa18.19■□□□□ 0.5
COL2A1-205ENST00000474996 ZNF316A6NFI3 1004 aaPredicted RBP18.19■□□□□ 0.5
COL2A1-205ENST00000474996 FKBP1AP62942 108 aaKnown RBP18.19■□□□□ 0.5
COL2A1-205ENST00000474996 SREBF2Q12772 1141 aa18.19■□□□□ 0.5
COL2A1-205ENST00000474996 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.19■□□□□ 0.5
COL2A1-205ENST00000474996 SPDYE2BA6NHP3 402 aa18.18■□□□□ 0.5
COL2A1-205ENST00000474996 GPR25O00155 361 aa18.18■□□□□ 0.5
COL2A1-205ENST00000474996 MYO1BO43795 1136 aa18.18■□□□□ 0.5
COL2A1-205ENST00000474996 ALDH1L1O75891 902 aa18.18■□□□□ 0.5
COL2A1-205ENST00000474996 SPDYE6P0CI01 402 aa18.18■□□□□ 0.5
COL2A1-205ENST00000474996 SPRYD7Q5W111 196 aa18.18■□□□□ 0.5
COL2A1-205ENST00000474996 PRMT6Q96LA8 375 aaPredicted RBP18.18■□□□□ 0.5
COL2A1-205ENST00000474996 SRCIN1Q9C0H9 1055 aa18.18■□□□□ 0.5
COL2A1-205ENST00000474996 AOX1Q06278 1338 aa18.18■□□□□ 0.5
COL2A1-205ENST00000474996 SUCLG2Q96I99 432 aa18.17■□□□□ 0.5
COL2A1-205ENST00000474996 VEZTQ9HBM0 779 aa18.17■□□□□ 0.5
COL2A1-205ENST00000474996 HPS5Q9UPZ3 1129 aa18.17■□□□□ 0.5
COL2A1-205ENST00000474996 PPP2R3BQ9Y5P8 575 aa18.17■□□□□ 0.5
COL2A1-205ENST00000474996 RBM5P52756 815 aaKnown RBP eCLIP18.16■□□□□ 0.5
COL2A1-205ENST00000474996 PKN2Q16513 984 aaKnown RBP18.16■□□□□ 0.5
COL2A1-205ENST00000474996 MAP3K11Q16584 847 aa18.16■□□□□ 0.5
COL2A1-205ENST00000474996 SLC10A4Q96EP9 437 aa18.16■□□□□ 0.5
COL2A1-205ENST00000474996 KAZALD1Q96I82 304 aa18.16■□□□□ 0.5
COL2A1-205ENST00000474996 CLMNQ96JQ2 1002 aa18.16■□□□□ 0.5
COL2A1-205ENST00000474996 PUS3Q9BZE2 481 aaKnown RBP18.16■□□□□ 0.5
COL2A1-205ENST00000474996 R3HDMLQ9H3Y0 253 aa18.16■□□□□ 0.5
COL2A1-205ENST00000474996 PDE4DIPQ5VU43 2346 aa18.15■□□□□ 0.5
COL2A1-205ENST00000474996 PPP1R12BO60237 982 aaPredicted RBP18.15■□□□□ 0.5
COL2A1-205ENST00000474996 NBPF7P0C2Y1 421 aaPredicted RBP18.15■□□□□ 0.5
COL2A1-205ENST00000474996 GYG1P46976 350 aa18.15■□□□□ 0.5
COL2A1-205ENST00000474996 NOM1Q5C9Z4 860 aaKnown RBP18.15■□□□□ 0.5
COL2A1-205ENST00000474996 TDRD7Q8NHU6 1098 aaKnown RBP18.15■□□□□ 0.5
COL2A1-205ENST00000474996 FAM205AQ6ZU69 1335 aa18.15■□□□□ 0.5
COL2A1-205ENST00000474996 HIBADHP31937 336 aaKnown RBP18.14■□□□□ 0.49
COL2A1-205ENST00000474996 UBE4AQ14139 1066 aa18.14■□□□□ 0.49
COL2A1-205ENST00000474996 SUPT20HL1Q3ZLR7 823 aa18.14■□□□□ 0.49
COL2A1-205ENST00000474996 MFSD14BQ5SR56 506 aa18.14■□□□□ 0.49
COL2A1-205ENST00000474996 NBPF12Q5TAG4 269 aaPredicted RBP18.14■□□□□ 0.49
COL2A1-205ENST00000474996 CFHR5Q9BXR6 569 aa18.14■□□□□ 0.49
COL2A1-205ENST00000474996 ARAP2Q8WZ64 1704 aa18.14■□□□□ 0.49
COL2A1-205ENST00000474996 LAMB1P07942 1786 aa18.13■□□□□ 0.49
COL2A1-205ENST00000474996 MANSC4A6NHS7 340 aaPredicted RBP18.13■□□□□ 0.49
COL2A1-205ENST00000474996 FKTNO75072 461 aa18.13■□□□□ 0.49
COL2A1-205ENST00000474996 RASA3Q14644 834 aa18.13■□□□□ 0.49
COL2A1-205ENST00000474996 WNK4Q96J92 1243 aa18.13■□□□□ 0.49
COL2A1-205ENST00000474996 FAM84BQ96KN1 310 aaPredicted RBP18.13■□□□□ 0.49
COL2A1-205ENST00000474996 TTF2Q9UNY4 1162 aaKnown RBP18.13■□□□□ 0.49
COL2A1-205ENST00000474996 SLC34A2O95436 690 aa18.12■□□□□ 0.49
COL2A1-205ENST00000474996 ALDH1A1P00352 501 aa18.12■□□□□ 0.49
COL2A1-205ENST00000474996 ZBTB48P10074 688 aaPredicted RBP18.12■□□□□ 0.49
COL2A1-205ENST00000474996 IFNL1Q8IU54 200 aa18.12■□□□□ 0.49
COL2A1-205ENST00000474996 BICC1Q9H694 974 aaKnown RBP18.12■□□□□ 0.49
COL2A1-205ENST00000474996 RIPOR2Q9Y4F9 1068 aa18.12■□□□□ 0.49
COL2A1-205ENST00000474996 UTYO14607 1347 aa18.12■□□□□ 0.49
COL2A1-205ENST00000474996 ZNF521Q96K83 1311 aa18.12■□□□□ 0.49
COL2A1-205ENST00000474996 USP2O75604 605 aaPredicted RBP18.11■□□□□ 0.49
COL2A1-205ENST00000474996 IREB2P48200 963 aaKnown RBP18.11■□□□□ 0.49
COL2A1-205ENST00000474996 INHBEP58166 350 aa18.11■□□□□ 0.49
COL2A1-205ENST00000474996 SPDYE2Q495Y8 402 aa18.11■□□□□ 0.49
COL2A1-205ENST00000474996 FBXO46Q6PJ61 603 aaPredicted RBP18.11■□□□□ 0.49
COL2A1-205ENST00000474996 TDRD3Q9H7E2 651 aaKnown RBP18.11■□□□□ 0.49
COL2A1-205ENST00000474996 ZNF70Q9UC06 446 aaPredicted RBP18.11■□□□□ 0.49
COL2A1-205ENST00000474996 SERPINA10Q9UK55 444 aa18.11■□□□□ 0.49
COL2A1-205ENST00000474996 MROH5Q6ZUA9 1318 aa18.11■□□□□ 0.49
COL2A1-205ENST00000474996 OTOFQ9HC10 1997 aa18.11■□□□□ 0.49
COL2A1-205ENST00000474996 UNCXA6NJT0 531 aa18.1■□□□□ 0.49
COL2A1-205ENST00000474996 IGF2BP3O00425 579 aaKnown RBP eCLIP18.1■□□□□ 0.49
COL2A1-205ENST00000474996 RABL6Q3YEC7 729 aaPredicted RBP18.1■□□□□ 0.49
COL2A1-205ENST00000474996 MRPL50Q8N5N7 158 aaKnown RBP18.1■□□□□ 0.49
COL2A1-205ENST00000474996 IQSEC3Q9UPP2 1182 aaPredicted RBP18.1■□□□□ 0.49
COL2A1-205ENST00000474996 GJA5P36382 358 aa18.09■□□□□ 0.49
COL2A1-205ENST00000474996 TNFAIP1Q13829 316 aa18.09■□□□□ 0.49
COL2A1-205ENST00000474996 LRRC24Q50LG9 513 aa18.09■□□□□ 0.49
COL2A1-205ENST00000474996 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
COL2A1-205ENST00000474996 ANKRD13AQ8IZ07 590 aa18.09■□□□□ 0.49
COL2A1-205ENST00000474996 ANKRD44Q8N8A2 993 aa18.09■□□□□ 0.49
COL2A1-205ENST00000474996 CRKP46108 304 aa18.08■□□□□ 0.48
COL2A1-205ENST00000474996 GRIK5Q16478 980 aa18.08■□□□□ 0.48
COL2A1-205ENST00000474996 METTL24Q5JXM2 366 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms