RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 FBXO46Q6PJ61 603 aaPredicted RBP17.83■□□□□ 0.44
CCDC78-209ENST00000474647 CERS5Q8N5B7 392 aa17.83■□□□□ 0.44
CCDC78-209ENST00000474647 ZBED3Q96IU2 234 aaPredicted RBP17.83■□□□□ 0.44
CCDC78-209ENST00000474647 DEFB129Q9H1M3 183 aa17.83■□□□□ 0.44
CCDC78-209ENST00000474647 R3HDMLQ9H3Y0 253 aa17.83■□□□□ 0.44
CCDC78-209ENST00000474647 PCDHAC2Q9Y5I4 1007 aa17.83■□□□□ 0.44
CCDC78-209ENST00000474647 MKI67P46013 3256 aaKnown RBP17.82■□□□□ 0.44
CCDC78-209ENST00000474647 CLRN2A0PK11 232 aa17.82■□□□□ 0.44
CCDC78-209ENST00000474647 MYO1BO43795 1136 aa17.82■□□□□ 0.44
CCDC78-209ENST00000474647 IFIT5Q13325 482 aaKnown RBP17.82■□□□□ 0.44
CCDC78-209ENST00000474647 ZNF804AQ7Z570 1209 aa17.82■□□□□ 0.44
CCDC78-209ENST00000474647 VEZTQ9HBM0 779 aa17.82■□□□□ 0.44
CCDC78-209ENST00000474647 JAG2Q9Y219 1238 aa17.82■□□□□ 0.44
CCDC78-209ENST00000474647 IL16Q14005 1332 aa17.81■□□□□ 0.44
CCDC78-209ENST00000474647 AK9Q5TCS8 1911 aa17.81■□□□□ 0.44
CCDC78-209ENST00000474647 NOM1Q5C9Z4 860 aaKnown RBP17.81■□□□□ 0.44
CCDC78-209ENST00000474647 LDLRAD1Q5T700 205 aa17.81■□□□□ 0.44
CCDC78-209ENST00000474647 PRPF38BQ5VTL8 546 aaKnown RBP17.81■□□□□ 0.44
CCDC78-209ENST00000474647 SLC10A4Q96EP9 437 aa17.81■□□□□ 0.44
CCDC78-209ENST00000474647 SALL2Q9Y467 1007 aaPredicted RBP17.81■□□□□ 0.44
CCDC78-209ENST00000474647 IRS2Q9Y4H2 1338 aa17.8■□□□□ 0.44
CCDC78-209ENST00000474647 PPP1R12BO60237 982 aaPredicted RBP17.8■□□□□ 0.44
CCDC78-209ENST00000474647 PLIN1O60240 522 aa17.8■□□□□ 0.44
CCDC78-209ENST00000474647 ALDH1A1P00352 501 aa17.8■□□□□ 0.44
CCDC78-209ENST00000474647 RBM5P52756 815 aaKnown RBP eCLIP17.8■□□□□ 0.44
CCDC78-209ENST00000474647 CFAP100Q494V2 611 aa17.8■□□□□ 0.44
CCDC78-209ENST00000474647 TAF7LQ5H9L4 462 aa17.8■□□□□ 0.44
CCDC78-209ENST00000474647 WNK4Q96J92 1243 aa17.8■□□□□ 0.44
CCDC78-209ENST00000474647 CLMNQ96JQ2 1002 aa17.8■□□□□ 0.44
CCDC78-209ENST00000474647 BRCA2P51587 3418 aa17.79■□□□□ 0.44
CCDC78-209ENST00000474647 MANSC4A6NHS7 340 aaPredicted RBP17.79■□□□□ 0.44
CCDC78-209ENST00000474647 F6X3S4 739 aa17.79■□□□□ 0.44
CCDC78-209ENST00000474647 FOXO4P98177 505 aa17.79■□□□□ 0.44
CCDC78-209ENST00000474647 CFHR5Q9BXR6 569 aa17.79■□□□□ 0.44
CCDC78-209ENST00000474647 PPP2R3BQ9Y5P8 575 aa17.79■□□□□ 0.44
CCDC78-209ENST00000474647 SPDYE2BA6NHP3 402 aa17.78■□□□□ 0.44
CCDC78-209ENST00000474647 SPDYE6P0CI01 402 aa17.78■□□□□ 0.44
CCDC78-209ENST00000474647 IL1R1P14778 569 aa17.78■□□□□ 0.44
CCDC78-209ENST00000474647 EXOSC9Q06265 439 aaKnown RBP17.78■□□□□ 0.44
CCDC78-209ENST00000474647 IFNL1Q8IU54 200 aa17.78■□□□□ 0.44
CCDC78-209ENST00000474647 MTMR14Q8NCE2 650 aa17.78■□□□□ 0.44
CCDC78-209ENST00000474647 ZNF594Q96JF6 807 aaPredicted RBP17.78■□□□□ 0.44
CCDC78-209ENST00000474647 TRIM17Q9Y577 477 aa17.78■□□□□ 0.44
CCDC78-209ENST00000474647 ZSWIM8A7E2V4 1837 aa17.77■□□□□ 0.44
CCDC78-209ENST00000474647 AOX1Q06278 1338 aa17.77■□□□□ 0.44
CCDC78-209ENST00000474647 ZBTB48P10074 688 aaPredicted RBP17.77■□□□□ 0.44
CCDC78-209ENST00000474647 MAP3K11Q16584 847 aa17.77■□□□□ 0.44
CCDC78-209ENST00000474647 CCDC57Q2TAC2 916 aa17.77■□□□□ 0.44
CCDC78-209ENST00000474647 LMBR1LQ6UX01 489 aa17.77■□□□□ 0.44
CCDC78-209ENST00000474647 C15orf52Q6ZUT6 534 aaKnown RBP17.77■□□□□ 0.44
CCDC78-209ENST00000474647 PRMT6Q96LA8 375 aaPredicted RBP17.77■□□□□ 0.44
CCDC78-209ENST00000474647 CNNM1Q9NRU3 951 aa17.77■□□□□ 0.44
CCDC78-209ENST00000474647 IGF2BP3O00425 579 aaKnown RBP eCLIP17.76■□□□□ 0.43
CCDC78-209ENST00000474647 VAMP4O75379 141 aa17.76■□□□□ 0.43
CCDC78-209ENST00000474647 IREB2P48200 963 aaKnown RBP17.76■□□□□ 0.43
CCDC78-209ENST00000474647 INHBEP58166 350 aa17.76■□□□□ 0.43
CCDC78-209ENST00000474647 SUPT20HL1Q3ZLR7 823 aa17.76■□□□□ 0.43
CCDC78-209ENST00000474647 NBPF12Q5TAG4 269 aaPredicted RBP17.76■□□□□ 0.43
CCDC78-209ENST00000474647 LDHAL6AQ6ZMR3 332 aa17.76■□□□□ 0.43
CCDC78-209ENST00000474647 MRS2Q9HD23 443 aa17.76■□□□□ 0.43
CCDC78-209ENST00000474647 PCDH10Q9P2E7 1040 aa17.76■□□□□ 0.43
CCDC78-209ENST00000474647 KIAA0100Q14667 2235 aaKnown RBP17.75■□□□□ 0.43
CCDC78-209ENST00000474647 FKBP1AP62942 108 aaKnown RBP17.75■□□□□ 0.43
CCDC78-209ENST00000474647 EPHA10Q5JZY3 1008 aa17.75■□□□□ 0.43
CCDC78-209ENST00000474647 BEND3Q5T5X7 828 aa17.75■□□□□ 0.43
CCDC78-209ENST00000474647 GRM8O00222 908 aa17.74■□□□□ 0.43
CCDC78-209ENST00000474647 RASA3Q14644 834 aa17.74■□□□□ 0.43
CCDC78-209ENST00000474647 MFSD14BQ5SR56 506 aa17.73■□□□□ 0.43
CCDC78-209ENST00000474647 OTUD7BQ6GQQ9 843 aa17.73■□□□□ 0.43
CCDC78-209ENST00000474647 SLC4A10Q6U841 1118 aa17.73■□□□□ 0.43
CCDC78-209ENST00000474647 OTOP1Q7RTM1 612 aa17.73■□□□□ 0.43
CCDC78-209ENST00000474647 ANKRD13AQ8IZ07 590 aa17.73■□□□□ 0.43
CCDC78-209ENST00000474647 C9orf78Q9NZ63 289 aaPredicted RBP17.73■□□□□ 0.43
CCDC78-209ENST00000474647 USP2O75604 605 aaPredicted RBP17.72■□□□□ 0.43
CCDC78-209ENST00000474647 GJA5P36382 358 aa17.72■□□□□ 0.43
CCDC78-209ENST00000474647 GYG1P46976 350 aa17.72■□□□□ 0.43
CCDC78-209ENST00000474647 CRHR2Q13324 411 aa17.72■□□□□ 0.43
CCDC78-209ENST00000474647 TNFAIP1Q13829 316 aa17.72■□□□□ 0.43
CCDC78-209ENST00000474647 WDR63Q8IWG1 891 aa17.72■□□□□ 0.43
CCDC78-209ENST00000474647 CD99L2Q8TCZ2 262 aa17.72■□□□□ 0.43
CCDC78-209ENST00000474647 ERO1AQ96HE7 468 aa17.72■□□□□ 0.43
CCDC78-209ENST00000474647 ELP3Q9H9T3 547 aa17.72■□□□□ 0.43
CCDC78-209ENST00000474647 TTF2Q9UNY4 1162 aaKnown RBP17.72■□□□□ 0.43
CCDC78-209ENST00000474647 OPTNQ96CV9 577 aa17.71■□□□□ 0.43
CCDC78-209ENST00000474647 TDRD3Q9H7E2 651 aaKnown RBP17.71■□□□□ 0.43
CCDC78-209ENST00000474647 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
CCDC78-209ENST00000474647 UNCXA6NJT0 531 aa17.7■□□□□ 0.42
CCDC78-209ENST00000474647 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
CCDC78-209ENST00000474647 NCBP3Q53F19 620 aaKnown RBP17.7■□□□□ 0.42
CCDC78-209ENST00000474647 FAM205AQ6ZU69 1335 aa17.7■□□□□ 0.42
CCDC78-209ENST00000474647 POTEFA5A3E0 1075 aa17.69■□□□□ 0.42
CCDC78-209ENST00000474647 TCP10L2B9ZVM9 353 aa17.69■□□□□ 0.42
CCDC78-209ENST00000474647 HIBADHP31937 336 aaKnown RBP17.69■□□□□ 0.42
CCDC78-209ENST00000474647 CDAN1Q8IWY9 1227 aa17.69■□□□□ 0.42
CCDC78-209ENST00000474647 UBE4AQ14139 1066 aa17.68■□□□□ 0.42
CCDC78-209ENST00000474647 INTS3Q68E01 1043 aaKnown RBP17.68■□□□□ 0.42
CCDC78-209ENST00000474647 VPS37DQ86XT2 251 aa17.68■□□□□ 0.42
CCDC78-209ENST00000474647 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
CCDC78-209ENST00000474647 TDRD7Q8NHU6 1098 aaKnown RBP17.68■□□□□ 0.42
CCDC78-209ENST00000474647 SUCLG2Q96I99 432 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms