RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 NBPF9Q3BBW0 867 aa19.92■□□□□ 0.78
ITGB1-210ENST00000474568 CAVIN4Q5BKX8 364 aa19.92■□□□□ 0.78
ITGB1-210ENST00000474568 YTHDC1Q96MU7 727 aaKnown RBP19.92■□□□□ 0.78
ITGB1-210ENST00000474568 CEP126Q9P2H0 1117 aa19.92■□□□□ 0.78
ITGB1-210ENST00000474568 HDAC9Q9UKV0 1011 aa19.92■□□□□ 0.78
ITGB1-210ENST00000474568 PSME4Q14997 1843 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 FRAT2O75474 233 aaPredicted RBP19.91■□□□□ 0.78
ITGB1-210ENST00000474568 CIAO1O76071 339 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 SLC5A1P13866 664 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 FGFR2P21802 821 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 PAXIP1Q6ZW49 1069 aaPredicted RBP19.91■□□□□ 0.78
ITGB1-210ENST00000474568 FBXO33Q7Z6M2 555 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 SULF1Q8IWU6 871 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 COPRSQ9NQ92 184 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 RCAN3Q9UKA8 241 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 CNTNAP1P78357 1384 aa19.91■□□□□ 0.78
ITGB1-210ENST00000474568 PNMA6EA0A0J9YXQ4 647 aa19.9■□□□□ 0.78
ITGB1-210ENST00000474568 IL15P40933 162 aaPredicted RBP19.9■□□□□ 0.78
ITGB1-210ENST00000474568 GRM1Q13255 1194 aa19.9■□□□□ 0.78
ITGB1-210ENST00000474568 ATP2B3Q16720 1220 aa19.9■□□□□ 0.78
ITGB1-210ENST00000474568 PCDHAC2Q9Y5I4 1007 aa19.9■□□□□ 0.78
ITGB1-210ENST00000474568 WNT10BO00744 389 aa19.89■□□□□ 0.77
ITGB1-210ENST00000474568 MTX1Q13505 466 aa19.89■□□□□ 0.77
ITGB1-210ENST00000474568 DEFB115Q30KQ5 88 aa19.89■□□□□ 0.77
ITGB1-210ENST00000474568 MFSD14BQ5SR56 506 aa19.89■□□□□ 0.77
ITGB1-210ENST00000474568 FAM205AQ6ZU69 1335 aa19.89■□□□□ 0.77
ITGB1-210ENST00000474568 LPIN2Q92539 896 aa19.89■□□□□ 0.77
ITGB1-210ENST00000474568 FBXO3Q9UK99 471 aa19.89■□□□□ 0.77
ITGB1-210ENST00000474568 ZNF646O15015 1829 aaPredicted RBP19.88■□□□□ 0.77
ITGB1-210ENST00000474568 VEGFBP49765 207 aa19.88■□□□□ 0.77
ITGB1-210ENST00000474568 JMYQ8N9B5 988 aa19.88■□□□□ 0.77
ITGB1-210ENST00000474568 ZBTB7BO15156 539 aaPredicted RBP19.87■□□□□ 0.77
ITGB1-210ENST00000474568 TFCP2Q12800 502 aa19.87■□□□□ 0.77
ITGB1-210ENST00000474568 DLGAP5Q15398 846 aa19.87■□□□□ 0.77
ITGB1-210ENST00000474568 PRAMEF18Q5VWM3 479 aa19.87■□□□□ 0.77
ITGB1-210ENST00000474568 TLL2Q9Y6L7 1015 aa19.87■□□□□ 0.77
ITGB1-210ENST00000474568 RASSF10A6NK89 507 aa19.86■□□□□ 0.77
ITGB1-210ENST00000474568 ADORA1P30542 326 aa19.86■□□□□ 0.77
ITGB1-210ENST00000474568 RBM5P52756 815 aaKnown RBP eCLIP19.86■□□□□ 0.77
ITGB1-210ENST00000474568 FKBP1AP62942 108 aaKnown RBP19.86■□□□□ 0.77
ITGB1-210ENST00000474568 GRIK5Q16478 980 aa19.86■□□□□ 0.77
ITGB1-210ENST00000474568 CFAP100Q494V2 611 aa19.86■□□□□ 0.77
ITGB1-210ENST00000474568 CDCA5Q96FF9 252 aa19.86■□□□□ 0.77
ITGB1-210ENST00000474568 TTF2Q9UNY4 1162 aaKnown RBP19.86■□□□□ 0.77
ITGB1-210ENST00000474568 CYP4F22Q6NT55 531 aa19.85■□□□□ 0.77
ITGB1-210ENST00000474568 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.85■□□□□ 0.77
ITGB1-210ENST00000474568 TIMM10P62072 90 aa19.84■□□□□ 0.77
ITGB1-210ENST00000474568 ATP8B2P98198 1209 aa19.84■□□□□ 0.77
ITGB1-210ENST00000474568 G3BP1Q13283 466 aaKnown RBP eCLIP19.84■□□□□ 0.77
ITGB1-210ENST00000474568 SAPCD2Q86UD0 394 aa19.84■□□□□ 0.77
ITGB1-210ENST00000474568 ZBED3Q96IU2 234 aaPredicted RBP19.84■□□□□ 0.77
ITGB1-210ENST00000474568 COG6Q9Y2V7 657 aa19.84■□□□□ 0.77
ITGB1-210ENST00000474568 AOX1Q06278 1338 aa19.83■□□□□ 0.77
ITGB1-210ENST00000474568 PITPNM2Q9BZ72 1349 aa19.83■□□□□ 0.77
ITGB1-210ENST00000474568 CLRN2A0PK11 232 aa19.83■□□□□ 0.77
ITGB1-210ENST00000474568 MS4A1P11836 297 aa19.83■□□□□ 0.77
ITGB1-210ENST00000474568 PHKA1P46020 1223 aa19.83■□□□□ 0.77
ITGB1-210ENST00000474568 GBA2Q9HCG7 927 aaPredicted RBP19.83■□□□□ 0.77
ITGB1-210ENST00000474568 WDR33Q9C0J8 1336 aaKnown RBP19.82■□□□□ 0.76
ITGB1-210ENST00000474568 MMP14P50281 582 aa19.82■□□□□ 0.76
ITGB1-210ENST00000474568 HUNKP57058 714 aa19.82■□□□□ 0.76
ITGB1-210ENST00000474568 OS9Q13438 667 aaPredicted RBP19.82■□□□□ 0.76
ITGB1-210ENST00000474568 POLA2Q14181 598 aa19.82■□□□□ 0.76
ITGB1-210ENST00000474568 CAPNS2Q96L46 248 aa19.82■□□□□ 0.76
ITGB1-210ENST00000474568 PRMT6Q96LA8 375 aaPredicted RBP19.82■□□□□ 0.76
ITGB1-210ENST00000474568 A0A1B0GUL7 405 aa19.81■□□□□ 0.76
ITGB1-210ENST00000474568 SPDYE2BA6NHP3 402 aa19.81■□□□□ 0.76
ITGB1-210ENST00000474568 SPDYE6P0CI01 402 aa19.81■□□□□ 0.76
ITGB1-210ENST00000474568 HSPA1AP0DMV8 641 aaKnown RBP19.81■□□□□ 0.76
ITGB1-210ENST00000474568 HSPA1BP0DMV9 641 aaKnown RBP19.81■□□□□ 0.76
ITGB1-210ENST00000474568 MVPQ14764 893 aaKnown RBP19.81■□□□□ 0.76
ITGB1-210ENST00000474568 C20orf194Q5TEA3 1177 aa19.81■□□□□ 0.76
ITGB1-210ENST00000474568 C2orf69Q8N8R5 385 aa19.81■□□□□ 0.76
ITGB1-210ENST00000474568 TBC1D22AQ8WUA7 517 aa19.81■□□□□ 0.76
ITGB1-210ENST00000474568 NEUROD6Q96NK8 337 aa19.81■□□□□ 0.76
ITGB1-210ENST00000474568 VEZTQ9HBM0 779 aa19.81■□□□□ 0.76
ITGB1-210ENST00000474568 COL1A1P02452 1464 aaPredicted RBP19.8■□□□□ 0.76
ITGB1-210ENST00000474568 TRPM7Q96QT4 1865 aa19.8■□□□□ 0.76
ITGB1-210ENST00000474568 SURF6O75683 361 aaKnown RBP19.8■□□□□ 0.76
ITGB1-210ENST00000474568 CRKP46108 304 aa19.8■□□□□ 0.76
ITGB1-210ENST00000474568 CCDC102BQ68D86 513 aa19.8■□□□□ 0.76
ITGB1-210ENST00000474568 APOBEC3FQ8IUX4 373 aaKnown RBP19.8■□□□□ 0.76
ITGB1-210ENST00000474568 MTMR14Q8NCE2 650 aa19.8■□□□□ 0.76
ITGB1-210ENST00000474568 SSH3Q8TE77 659 aa19.8■□□□□ 0.76
ITGB1-210ENST00000474568 XAGE2Q96GT9 111 aa19.8■□□□□ 0.76
ITGB1-210ENST00000474568 GNL3LQ9NVN8 582 aaKnown RBP19.8■□□□□ 0.76
ITGB1-210ENST00000474568 AKAP2Q9Y2D5 859 aa19.8■□□□□ 0.76
ITGB1-210ENST00000474568 MYO1BO43795 1136 aa19.79■□□□□ 0.76
ITGB1-210ENST00000474568 AOC2O75106 756 aa19.79■□□□□ 0.76
ITGB1-210ENST00000474568 ECE1P42892 770 aa19.79■□□□□ 0.76
ITGB1-210ENST00000474568 CEP85Q6P2H3 762 aa19.79■□□□□ 0.76
ITGB1-210ENST00000474568 MOB2Q70IA6 237 aa19.79■□□□□ 0.76
ITGB1-210ENST00000474568 POLR2AP24928 1970 aaKnown RBP19.79■□□□□ 0.76
ITGB1-210ENST00000474568 PRKG1Q13976 671 aa19.78■□□□□ 0.76
ITGB1-210ENST00000474568 TDRD3Q9H7E2 651 aaKnown RBP19.78■□□□□ 0.76
ITGB1-210ENST00000474568 SERPINA10Q9UK55 444 aa19.78■□□□□ 0.76
ITGB1-210ENST00000474568 TTLL12Q14166 644 aaPredicted RBP19.77■□□□□ 0.76
ITGB1-210ENST00000474568 GORABQ5T7V8 394 aa19.77■□□□□ 0.76
ITGB1-210ENST00000474568 WDR66Q8TBY9 1149 aa19.77■□□□□ 0.76
ITGB1-210ENST00000474568 DDX19BQ9UMR2 479 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms