RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 ZIC5Q96T25 663 aa25.6■■□□□ 1.69
PDLIM4-206ENST00000474421 SMC4Q9NTJ3 1288 aa25.6■■□□□ 1.69
PDLIM4-206ENST00000474421 TSKSQ9UJT2 592 aa25.6■■□□□ 1.69
PDLIM4-206ENST00000474421 KIF23Q02241 960 aaPredicted RBP25.59■■□□□ 1.69
PDLIM4-206ENST00000474421 CERS5Q8N5B7 392 aa25.59■■□□□ 1.69
PDLIM4-206ENST00000474421 MTMR14Q8NCE2 650 aa25.59■■□□□ 1.69
PDLIM4-206ENST00000474421 SCAF8Q9UPN6 1271 aaKnown RBP25.59■■□□□ 1.69
PDLIM4-206ENST00000474421 RIPOR2Q9Y4F9 1068 aa25.59■■□□□ 1.69
PDLIM4-206ENST00000474421 AKAP11Q9UKA4 1901 aa25.59■■□□□ 1.69
PDLIM4-206ENST00000474421 PUS3Q9BZE2 481 aaKnown RBP25.58■■□□□ 1.69
PDLIM4-206ENST00000474421 SAGE1Q9NXZ1 904 aa25.58■■□□□ 1.69
PDLIM4-206ENST00000474421 MYO1BO43795 1136 aa25.57■■□□□ 1.68
PDLIM4-206ENST00000474421 HIBADHP31937 336 aaKnown RBP25.57■■□□□ 1.68
PDLIM4-206ENST00000474421 TTLL12Q14166 644 aaPredicted RBP25.57■■□□□ 1.68
PDLIM4-206ENST00000474421 ANKRD44Q8N8A2 993 aa25.57■■□□□ 1.68
PDLIM4-206ENST00000474421 USP44Q9H0E7 712 aa25.57■■□□□ 1.68
PDLIM4-206ENST00000474421 COL1A1P02452 1464 aaPredicted RBP25.57■■□□□ 1.68
PDLIM4-206ENST00000474421 FAM205AQ6ZU69 1335 aa25.57■■□□□ 1.68
PDLIM4-206ENST00000474421 ECM29Q5VYK3 1845 aa25.56■■□□□ 1.68
PDLIM4-206ENST00000474421 PRAMEF18Q5VWM3 479 aa25.56■■□□□ 1.68
PDLIM4-206ENST00000474421 RASAL3Q86YV0 1011 aa25.56■■□□□ 1.68
PDLIM4-206ENST00000474421 CASP8AP2Q9UKL3 1982 aa25.55■■□□□ 1.68
PDLIM4-206ENST00000474421 TDRD7Q8NHU6 1098 aaKnown RBP25.55■■□□□ 1.68
PDLIM4-206ENST00000474421 F8W031 263 aaPredicted RBP25.54■■□□□ 1.68
PDLIM4-206ENST00000474421 METTL24Q5JXM2 366 aa25.54■■□□□ 1.68
PDLIM4-206ENST00000474421 ARMC9Q7Z3E5 817 aa25.54■■□□□ 1.68
PDLIM4-206ENST00000474421 VPS37DQ86XT2 251 aa25.54■■□□□ 1.68
PDLIM4-206ENST00000474421 FAM84BQ96KN1 310 aaPredicted RBP25.54■■□□□ 1.68
PDLIM4-206ENST00000474421 UBE2Q2LH0YL09 131 aa25.53■■□□□ 1.68
PDLIM4-206ENST00000474421 GYG1P46976 350 aa25.53■■□□□ 1.68
PDLIM4-206ENST00000474421 CFAP100Q494V2 611 aa25.53■■□□□ 1.68
PDLIM4-206ENST00000474421 MOB2Q70IA6 237 aa25.53■■□□□ 1.68
PDLIM4-206ENST00000474421 ABHD8Q96I13 439 aa25.53■■□□□ 1.68
PDLIM4-206ENST00000474421 CSRNP1Q96S65 589 aa25.53■■□□□ 1.68
PDLIM4-206ENST00000474421 PPP2R3BQ9Y5P8 575 aa25.53■■□□□ 1.68
PDLIM4-206ENST00000474421 SPDYE2BA6NHP3 402 aa25.52■■□□□ 1.68
PDLIM4-206ENST00000474421 SPDYE6P0CI01 402 aa25.52■■□□□ 1.68
PDLIM4-206ENST00000474421 CAVIN4Q5BKX8 364 aa25.52■■□□□ 1.68
PDLIM4-206ENST00000474421 MFSD14BQ5SR56 506 aa25.52■■□□□ 1.68
PDLIM4-206ENST00000474421 DEFB129Q9H1M3 183 aa25.52■■□□□ 1.68
PDLIM4-206ENST00000474421 JAG2Q9Y219 1238 aa25.52■■□□□ 1.68
PDLIM4-206ENST00000474421 PDE8BO95263 885 aa25.51■■□□□ 1.67
PDLIM4-206ENST00000474421 LRRC24Q50LG9 513 aa25.51■■□□□ 1.67
PDLIM4-206ENST00000474421 API5Q9BZZ5 524 aaKnown RBP25.51■■□□□ 1.67
PDLIM4-206ENST00000474421 RNF186Q9NXI6 227 aa25.51■■□□□ 1.67
PDLIM4-206ENST00000474421 HDAC5Q9UQL6 1122 aa25.51■■□□□ 1.67
PDLIM4-206ENST00000474421 RBM5P52756 815 aaKnown RBP eCLIP25.5■■□□□ 1.67
PDLIM4-206ENST00000474421 FBXO33Q7Z6M2 555 aa25.5■■□□□ 1.67
PDLIM4-206ENST00000474421 ARAP2Q8WZ64 1704 aa25.49■■□□□ 1.67
PDLIM4-206ENST00000474421 TRPA1O75762 1119 aa25.49■■□□□ 1.67
PDLIM4-206ENST00000474421 VGLL2Q8N8G2 317 aa25.49■■□□□ 1.67
PDLIM4-206ENST00000474421 PRMT6Q96LA8 375 aaPredicted RBP25.49■■□□□ 1.67
PDLIM4-206ENST00000474421 SERPINA10Q9UK55 444 aa25.49■■□□□ 1.67
PDLIM4-206ENST00000474421 NOB1Q9ULX3 412 aaKnown RBP25.49■■□□□ 1.67
PDLIM4-206ENST00000474421 TBC1D22AQ8WUA7 517 aa25.48■■□□□ 1.67
PDLIM4-206ENST00000474421 TTF2Q9UNY4 1162 aaKnown RBP25.48■■□□□ 1.67
PDLIM4-206ENST00000474421 KIF16BQ96L93 1317 aa25.47■■□□□ 1.67
PDLIM4-206ENST00000474421 FRAT2O75474 233 aaPredicted RBP25.47■■□□□ 1.67
PDLIM4-206ENST00000474421 UBTFL1P0CB47 393 aaPredicted RBP25.47■■□□□ 1.67
PDLIM4-206ENST00000474421 PUM3Q15397 648 aaKnown RBP25.47■■□□□ 1.67
PDLIM4-206ENST00000474421 SUPT20HL1Q3ZLR7 823 aa25.47■■□□□ 1.67
PDLIM4-206ENST00000474421 KLHDC4Q8TBB5 520 aa25.47■■□□□ 1.67
PDLIM4-206ENST00000474421 VEZTQ9HBM0 779 aa25.47■■□□□ 1.67
PDLIM4-206ENST00000474421 CLRN2A0PK11 232 aa25.46■■□□□ 1.67
PDLIM4-206ENST00000474421 PPP1R12BO60237 982 aaPredicted RBP25.46■■□□□ 1.67
PDLIM4-206ENST00000474421 IFIT1P09914 478 aaKnown RBP25.46■■□□□ 1.67
PDLIM4-206ENST00000474421 ANGEL1Q9UNK9 670 aaKnown RBP25.46■■□□□ 1.67
PDLIM4-206ENST00000474421 PCDHAC2Q9Y5I4 1007 aa25.46■■□□□ 1.67
PDLIM4-206ENST00000474421 EYA2O00167 538 aa25.45■■□□□ 1.66
PDLIM4-206ENST00000474421 PTPN12Q05209 780 aaKnown RBP25.45■■□□□ 1.66
PDLIM4-206ENST00000474421 TNFAIP1Q13829 316 aa25.45■■□□□ 1.66
PDLIM4-206ENST00000474421 PRKG1Q13976 671 aa25.45■■□□□ 1.66
PDLIM4-206ENST00000474421 LDLRAD1Q5T700 205 aa25.45■■□□□ 1.66
PDLIM4-206ENST00000474421 FBXO3Q9UK99 471 aa25.45■■□□□ 1.66
PDLIM4-206ENST00000474421 UNCXA6NJT0 531 aa25.44■■□□□ 1.66
PDLIM4-206ENST00000474421 RFX5P48382 616 aaPredicted RBP25.44■■□□□ 1.66
PDLIM4-206ENST00000474421 RARSP54136 660 aaKnown RBP25.43■■□□□ 1.66
PDLIM4-206ENST00000474421 CHAF1AQ13111 956 aaPredicted RBP25.43■■□□□ 1.66
PDLIM4-206ENST00000474421 DGKZQ13574 1117 aa25.43■■□□□ 1.66
PDLIM4-206ENST00000474421 MAP3K11Q16584 847 aa25.43■■□□□ 1.66
PDLIM4-206ENST00000474421 ARHGAP45Q92619 1136 aa25.43■■□□□ 1.66
PDLIM4-206ENST00000474421 MCOLN1Q9GZU1 580 aa25.43■■□□□ 1.66
PDLIM4-206ENST00000474421 SLC5A1P13866 664 aa25.42■■□□□ 1.66
PDLIM4-206ENST00000474421 FGFR2P21802 821 aa25.42■■□□□ 1.66
PDLIM4-206ENST00000474421 TM4SF4P48230 202 aa25.42■■□□□ 1.66
PDLIM4-206ENST00000474421 HDLBPQ00341 1268 aaKnown RBP25.42■■□□□ 1.66
PDLIM4-206ENST00000474421 SREBF2Q12772 1141 aa25.42■■□□□ 1.66
PDLIM4-206ENST00000474421 SPDYE2Q495Y8 402 aa25.42■■□□□ 1.66
PDLIM4-206ENST00000474421 IQSEC3Q9UPP2 1182 aaPredicted RBP25.42■■□□□ 1.66
PDLIM4-206ENST00000474421 CRKP46108 304 aa25.41■■□□□ 1.66
PDLIM4-206ENST00000474421 BCAMP50895 628 aa25.41■■□□□ 1.66
PDLIM4-206ENST00000474421 RASA3Q14644 834 aa25.41■■□□□ 1.66
PDLIM4-206ENST00000474421 DZIP1LQ8IYY4 767 aaKnown RBP25.41■■□□□ 1.66
PDLIM4-206ENST00000474421 LPIN2Q92539 896 aa25.41■■□□□ 1.66
PDLIM4-206ENST00000474421 ZNF70Q9UC06 446 aaPredicted RBP25.41■■□□□ 1.66
PDLIM4-206ENST00000474421 SUGT1Q9Y2Z0 365 aa25.41■■□□□ 1.66
PDLIM4-206ENST00000474421 CIAO1O76071 339 aa25.4■■□□□ 1.66
PDLIM4-206ENST00000474421 SLC10A4Q96EP9 437 aa25.4■■□□□ 1.66
PDLIM4-206ENST00000474421 MAST3O60307 1309 aa25.39■■□□□ 1.66
PDLIM4-206ENST00000474421 CCDC85CA6NKD9 419 aa25.39■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms