RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 WNT10BO00744 389 aa23.2■■□□□ 1.3
CCDC171-206ENST00000474193 MYO1BO43795 1136 aa23.2■■□□□ 1.3
CCDC171-206ENST00000474193 NF2P35240 595 aa23.2■■□□□ 1.3
CCDC171-206ENST00000474193 GYG1P46976 350 aa23.2■■□□□ 1.3
CCDC171-206ENST00000474193 NBPF9Q3BBW0 867 aa23.2■■□□□ 1.3
CCDC171-206ENST00000474193 ATF7IPQ6VMQ6 1270 aa23.2■■□□□ 1.3
CCDC171-206ENST00000474193 KLHDC4Q8TBB5 520 aa23.2■■□□□ 1.3
CCDC171-206ENST00000474193 FAM84BQ96KN1 310 aaPredicted RBP23.2■■□□□ 1.3
CCDC171-206ENST00000474193 ASTN2O75129 1339 aaPredicted RBP23.19■■□□□ 1.3
CCDC171-206ENST00000474193 TDRD7Q8NHU6 1098 aaKnown RBP23.19■■□□□ 1.3
CCDC171-206ENST00000474193 CDCA5Q96FF9 252 aa23.19■■□□□ 1.3
CCDC171-206ENST00000474193 LRRFIP2Q9Y608 721 aaKnown RBP23.19■■□□□ 1.3
CCDC171-206ENST00000474193 F8W031 263 aaPredicted RBP23.18■■□□□ 1.3
CCDC171-206ENST00000474193 CTCFP49711 727 aaPredicted RBP23.18■■□□□ 1.3
CCDC171-206ENST00000474193 RBM5P52756 815 aaKnown RBP eCLIP23.18■■□□□ 1.3
CCDC171-206ENST00000474193 PUM3Q15397 648 aaKnown RBP23.18■■□□□ 1.3
CCDC171-206ENST00000474193 ZKSCAN2Q63HK3 967 aa23.18■■□□□ 1.3
CCDC171-206ENST00000474193 APOBEC3FQ8IUX4 373 aaKnown RBP23.18■■□□□ 1.3
CCDC171-206ENST00000474193 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.18■■□□□ 1.3
CCDC171-206ENST00000474193 WBP1LQ9NX94 342 aa23.18■■□□□ 1.3
CCDC171-206ENST00000474193 FAM205AQ6ZU69 1335 aa23.17■■□□□ 1.3
CCDC171-206ENST00000474193 SLC5A1P13866 664 aa23.17■■□□□ 1.3
CCDC171-206ENST00000474193 FKBP1BP68106 108 aa23.17■■□□□ 1.3
CCDC171-206ENST00000474193 PTPN12Q05209 780 aaKnown RBP23.17■■□□□ 1.3
CCDC171-206ENST00000474193 DLK2Q6UY11 383 aa23.17■■□□□ 1.3
CCDC171-206ENST00000474193 CCDC102AQ96A19 550 aa23.17■■□□□ 1.3
CCDC171-206ENST00000474193 CEP126Q9P2H0 1117 aa23.17■■□□□ 1.3
CCDC171-206ENST00000474193 A0A1B0GUL6 1792 aa23.17■■□□□ 1.3
CCDC171-206ENST00000474193 MFSD14BQ5SR56 506 aa23.16■■□□□ 1.3
CCDC171-206ENST00000474193 RGMBQ6NW40 437 aa23.16■■□□□ 1.3
CCDC171-206ENST00000474193 FBXO33Q7Z6M2 555 aa23.16■■□□□ 1.3
CCDC171-206ENST00000474193 MEIS3Q99687 375 aa23.16■■□□□ 1.3
CCDC171-206ENST00000474193 JAG2Q9Y219 1238 aa23.16■■□□□ 1.3
CCDC171-206ENST00000474193 CIAO1O76071 339 aa23.15■■□□□ 1.3
CCDC171-206ENST00000474193 TRIM27P14373 513 aa23.15■■□□□ 1.3
CCDC171-206ENST00000474193 RFX5P48382 616 aaPredicted RBP23.15■■□□□ 1.3
CCDC171-206ENST00000474193 NOGQ13253 232 aa23.15■■□□□ 1.3
CCDC171-206ENST00000474193 CERS5Q8N5B7 392 aa23.15■■□□□ 1.3
CCDC171-206ENST00000474193 MTMR14Q8NCE2 650 aa23.15■■□□□ 1.3
CCDC171-206ENST00000474193 TBC1D22AQ8WUA7 517 aa23.15■■□□□ 1.3
CCDC171-206ENST00000474193 LPIN2Q92539 896 aa23.15■■□□□ 1.3
CCDC171-206ENST00000474193 SIL1Q9H173 461 aa23.15■■□□□ 1.3
CCDC171-206ENST00000474193 MS4A1P11836 297 aa23.14■■□□□ 1.29
CCDC171-206ENST00000474193 IL15P40933 162 aaPredicted RBP23.14■■□□□ 1.29
CCDC171-206ENST00000474193 ZNF157P51786 506 aaPredicted RBP23.14■■□□□ 1.29
CCDC171-206ENST00000474193 TTLL12Q14166 644 aaPredicted RBP23.14■■□□□ 1.29
CCDC171-206ENST00000474193 VGLL2Q8N8G2 317 aa23.14■■□□□ 1.29
CCDC171-206ENST00000474193 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
CCDC171-206ENST00000474193 FOXN1O15353 648 aa23.13■■□□□ 1.29
CCDC171-206ENST00000474193 CHAF1AQ13111 956 aaPredicted RBP23.13■■□□□ 1.29
CCDC171-206ENST00000474193 CFAP100Q494V2 611 aa23.13■■□□□ 1.29
CCDC171-206ENST00000474193 IFFO2Q5TF58 517 aa23.13■■□□□ 1.29
CCDC171-206ENST00000474193 FTSJ3Q8IY81 847 aaKnown RBP23.13■■□□□ 1.29
CCDC171-206ENST00000474193 TTF2Q9UNY4 1162 aaKnown RBP23.13■■□□□ 1.29
CCDC171-206ENST00000474193 AOC2O75106 756 aa23.12■■□□□ 1.29
CCDC171-206ENST00000474193 GNAI2P04899 355 aa23.12■■□□□ 1.29
CCDC171-206ENST00000474193 COL13A1Q5TAT6 717 aaPredicted RBP23.12■■□□□ 1.29
CCDC171-206ENST00000474193 GNL3LQ9NVN8 582 aaKnown RBP23.12■■□□□ 1.29
CCDC171-206ENST00000474193 IQSEC3Q9UPP2 1182 aaPredicted RBP23.12■■□□□ 1.29
CCDC171-206ENST00000474193 SRGAP3O43295 1099 aa23.11■■□□□ 1.29
CCDC171-206ENST00000474193 BCAMP50895 628 aa23.11■■□□□ 1.29
CCDC171-206ENST00000474193 ZBED3Q96IU2 234 aaPredicted RBP23.11■■□□□ 1.29
CCDC171-206ENST00000474193 COPRSQ9NQ92 184 aa23.11■■□□□ 1.29
CCDC171-206ENST00000474193 PRDM10Q9NQV6 1147 aa23.11■■□□□ 1.29
CCDC171-206ENST00000474193 CA12O43570 354 aa23.1■■□□□ 1.29
CCDC171-206ENST00000474193 FGFR2P21802 821 aa23.1■■□□□ 1.29
CCDC171-206ENST00000474193 ATG9AQ7Z3C6 839 aa23.1■■□□□ 1.29
CCDC171-206ENST00000474193 TNS4Q8IZW8 715 aa23.1■■□□□ 1.29
CCDC171-206ENST00000474193 SERPINA10Q9UK55 444 aa23.1■■□□□ 1.29
CCDC171-206ENST00000474193 SCAF8Q9UPN6 1271 aaKnown RBP23.1■■□□□ 1.29
CCDC171-206ENST00000474193 SPDYE2BA6NHP3 402 aa23.09■■□□□ 1.29
CCDC171-206ENST00000474193 SPDYE6P0CI01 402 aa23.09■■□□□ 1.29
CCDC171-206ENST00000474193 ATP2B3Q16720 1220 aa23.09■■□□□ 1.29
CCDC171-206ENST00000474193 ARMC9Q7Z3E5 817 aa23.09■■□□□ 1.29
CCDC171-206ENST00000474193 VEZTQ9HBM0 779 aa23.09■■□□□ 1.29
CCDC171-206ENST00000474193 PPP2R3BQ9Y5P8 575 aa23.09■■□□□ 1.29
CCDC171-206ENST00000474193 ZNF646O15015 1829 aaPredicted RBP23.08■■□□□ 1.29
CCDC171-206ENST00000474193 TNFAIP1Q13829 316 aa23.08■■□□□ 1.29
CCDC171-206ENST00000474193 PRAMEF18Q5VWM3 479 aa23.08■■□□□ 1.29
CCDC171-206ENST00000474193 DZIP1LQ8IYY4 767 aaKnown RBP23.08■■□□□ 1.29
CCDC171-206ENST00000474193 PRMT6Q96LA8 375 aaPredicted RBP23.08■■□□□ 1.29
CCDC171-206ENST00000474193 DEFB129Q9H1M3 183 aa23.08■■□□□ 1.29
CCDC171-206ENST00000474193 AKAP2Q9Y2D5 859 aa23.08■■□□□ 1.29
CCDC171-206ENST00000474193 PCNTO95613 3336 aa23.08■■□□□ 1.28
CCDC171-206ENST00000474193 MAST3O60307 1309 aa23.08■■□□□ 1.28
CCDC171-206ENST00000474193 LBX1P52954 281 aa23.07■■□□□ 1.28
CCDC171-206ENST00000474193 SUPT20HL1Q3ZLR7 823 aa23.07■■□□□ 1.28
CCDC171-206ENST00000474193 REM2Q8IYK8 340 aaPredicted RBP23.07■■□□□ 1.28
CCDC171-206ENST00000474193 TMEM57Q8N5G2 664 aa23.07■■□□□ 1.28
CCDC171-206ENST00000474193 WDR66Q8TBY9 1149 aa23.07■■□□□ 1.28
CCDC171-206ENST00000474193 PA2G4Q9UQ80 394 aaKnown RBP23.07■■□□□ 1.28
CCDC171-206ENST00000474193 SUGT1Q9Y2Z0 365 aa23.07■■□□□ 1.28
CCDC171-206ENST00000474193 CLRN2A0PK11 232 aa23.06■■□□□ 1.28
CCDC171-206ENST00000474193 HDLBPQ00341 1268 aaKnown RBP23.06■■□□□ 1.28
CCDC171-206ENST00000474193 MTX1Q13505 466 aa23.06■■□□□ 1.28
CCDC171-206ENST00000474193 COL1A1P02452 1464 aaPredicted RBP23.05■■□□□ 1.28
CCDC171-206ENST00000474193 UBE2Q2LH0YL09 131 aa23.05■■□□□ 1.28
CCDC171-206ENST00000474193 PPP1R12BO60237 982 aaPredicted RBP23.05■■□□□ 1.28
CCDC171-206ENST00000474193 CENPBP07199 599 aaPredicted RBP23.05■■□□□ 1.28
CCDC171-206ENST00000474193 TNNI2P48788 182 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms