RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 ADM5C9JUS6 153 aa25.52■■□□□ 1.68
SNX13-206ENST00000474067 SNAP23O00161 211 aa25.52■■□□□ 1.68
SNX13-206ENST00000474067 CIAO1O76071 339 aa25.52■■□□□ 1.68
SNX13-206ENST00000474067 HUNKP57058 714 aa25.52■■□□□ 1.68
SNX13-206ENST00000474067 TDRD7Q8NHU6 1098 aaKnown RBP25.52■■□□□ 1.68
SNX13-206ENST00000474067 SLC5A1P13866 664 aa25.51■■□□□ 1.67
SNX13-206ENST00000474067 NOGQ13253 232 aa25.51■■□□□ 1.67
SNX13-206ENST00000474067 LRRC24Q50LG9 513 aa25.51■■□□□ 1.67
SNX13-206ENST00000474067 CYP4F22Q6NT55 531 aa25.51■■□□□ 1.67
SNX13-206ENST00000474067 MTMR14Q8NCE2 650 aa25.51■■□□□ 1.67
SNX13-206ENST00000474067 CCDC102AQ96A19 550 aa25.51■■□□□ 1.67
SNX13-206ENST00000474067 CDCA5Q96FF9 252 aa25.51■■□□□ 1.67
SNX13-206ENST00000474067 COL1A1P02452 1464 aaPredicted RBP25.51■■□□□ 1.67
SNX13-206ENST00000474067 ZNF646O15015 1829 aaPredicted RBP25.5■■□□□ 1.67
SNX13-206ENST00000474067 CTCFP49711 727 aaPredicted RBP25.5■■□□□ 1.67
SNX13-206ENST00000474067 GRM1Q13255 1194 aa25.5■■□□□ 1.67
SNX13-206ENST00000474067 FAM84BQ96KN1 310 aaPredicted RBP25.5■■□□□ 1.67
SNX13-206ENST00000474067 MXD3Q9BW11 206 aa25.5■■□□□ 1.67
SNX13-206ENST00000474067 CEP126Q9P2H0 1117 aa25.5■■□□□ 1.67
SNX13-206ENST00000474067 LRRFIP2Q9Y608 721 aaKnown RBP25.5■■□□□ 1.67
SNX13-206ENST00000474067 CA12O43570 354 aa25.49■■□□□ 1.67
SNX13-206ENST00000474067 TRIM27P14373 513 aa25.49■■□□□ 1.67
SNX13-206ENST00000474067 IL15P40933 162 aaPredicted RBP25.49■■□□□ 1.67
SNX13-206ENST00000474067 GYG1P46976 350 aa25.49■■□□□ 1.67
SNX13-206ENST00000474067 PTPN12Q05209 780 aaKnown RBP25.49■■□□□ 1.67
SNX13-206ENST00000474067 NBPF9Q3BBW0 867 aa25.49■■□□□ 1.67
SNX13-206ENST00000474067 MFSD14BQ5SR56 506 aa25.49■■□□□ 1.67
SNX13-206ENST00000474067 LPIN2Q92539 896 aa25.49■■□□□ 1.67
SNX13-206ENST00000474067 WBP1LQ9NX94 342 aa25.49■■□□□ 1.67
SNX13-206ENST00000474067 PPP2R3BQ9Y5P8 575 aa25.49■■□□□ 1.67
SNX13-206ENST00000474067 POLR2AP24928 1970 aaKnown RBP25.49■■□□□ 1.67
SNX13-206ENST00000474067 RGMBQ6NW40 437 aa25.48■■□□□ 1.67
SNX13-206ENST00000474067 FTSJ3Q8IY81 847 aaKnown RBP25.48■■□□□ 1.67
SNX13-206ENST00000474067 VGLL2Q8N8G2 317 aa25.48■■□□□ 1.67
SNX13-206ENST00000474067 THSD7BQ9C0I4 1608 aa25.48■■□□□ 1.67
SNX13-206ENST00000474067 RFX5P48382 616 aaPredicted RBP25.47■■□□□ 1.67
SNX13-206ENST00000474067 FBXO33Q7Z6M2 555 aa25.47■■□□□ 1.67
SNX13-206ENST00000474067 MEIS3Q99687 375 aa25.47■■□□□ 1.67
SNX13-206ENST00000474067 GNL3LQ9NVN8 582 aaKnown RBP25.47■■□□□ 1.67
SNX13-206ENST00000474067 MAST3O60307 1309 aa25.46■■□□□ 1.67
SNX13-206ENST00000474067 BCAR3O75815 825 aa25.46■■□□□ 1.67
SNX13-206ENST00000474067 GNAI2P04899 355 aa25.46■■□□□ 1.67
SNX13-206ENST00000474067 RBM5P52756 815 aaKnown RBP eCLIP25.46■■□□□ 1.67
SNX13-206ENST00000474067 KLHDC4Q8TBB5 520 aa25.46■■□□□ 1.67
SNX13-206ENST00000474067 SERPINA10Q9UK55 444 aa25.46■■□□□ 1.67
SNX13-206ENST00000474067 SUGT1Q9Y2Z0 365 aa25.46■■□□□ 1.67
SNX13-206ENST00000474067 ASTN2O75129 1339 aaPredicted RBP25.45■■□□□ 1.66
SNX13-206ENST00000474067 MS4A1P11836 297 aa25.45■■□□□ 1.66
SNX13-206ENST00000474067 TNFAIP1Q13829 316 aa25.45■■□□□ 1.66
SNX13-206ENST00000474067 REM2Q8IYK8 340 aaPredicted RBP25.45■■□□□ 1.66
SNX13-206ENST00000474067 CERS5Q8N5B7 392 aa25.45■■□□□ 1.66
SNX13-206ENST00000474067 COPRSQ9NQ92 184 aa25.45■■□□□ 1.66
SNX13-206ENST00000474067 PRDM10Q9NQV6 1147 aa25.45■■□□□ 1.66
SNX13-206ENST00000474067 PAPPA2Q9BXP8 1791 aa25.45■■□□□ 1.66
SNX13-206ENST00000474067 F8W031 263 aaPredicted RBP25.44■■□□□ 1.66
SNX13-206ENST00000474067 MTX1Q13505 466 aa25.44■■□□□ 1.66
SNX13-206ENST00000474067 CFAP100Q494V2 611 aa25.44■■□□□ 1.66
SNX13-206ENST00000474067 SRGAP3O43295 1099 aa25.43■■□□□ 1.66
SNX13-206ENST00000474067 FGFR2P21802 821 aa25.43■■□□□ 1.66
SNX13-206ENST00000474067 ZNF157P51786 506 aaPredicted RBP25.43■■□□□ 1.66
SNX13-206ENST00000474067 HDLBPQ00341 1268 aaKnown RBP25.43■■□□□ 1.66
SNX13-206ENST00000474067 ATP2B3Q16720 1220 aa25.43■■□□□ 1.66
SNX13-206ENST00000474067 ZBED3Q96IU2 234 aaPredicted RBP25.43■■□□□ 1.66
SNX13-206ENST00000474067 SIL1Q9H173 461 aa25.43■■□□□ 1.66
SNX13-206ENST00000474067 TTF2Q9UNY4 1162 aaKnown RBP25.43■■□□□ 1.66
SNX13-206ENST00000474067 AKAP2Q9Y2D5 859 aa25.43■■□□□ 1.66
SNX13-206ENST00000474067 ARAP2Q8WZ64 1704 aa25.43■■□□□ 1.66
SNX13-206ENST00000474067 SPDYE2BA6NHP3 402 aa25.42■■□□□ 1.66
SNX13-206ENST00000474067 FOXN1O15353 648 aa25.42■■□□□ 1.66
SNX13-206ENST00000474067 SPDYE6P0CI01 402 aa25.42■■□□□ 1.66
SNX13-206ENST00000474067 IFFO2Q5TF58 517 aa25.42■■□□□ 1.66
SNX13-206ENST00000474067 ARMC9Q7Z3E5 817 aa25.42■■□□□ 1.66
SNX13-206ENST00000474067 WDR66Q8TBY9 1149 aa25.42■■□□□ 1.66
SNX13-206ENST00000474067 CLUAP1Q96AJ1 413 aa25.42■■□□□ 1.66
SNX13-206ENST00000474067 ECM29Q5VYK3 1845 aa25.42■■□□□ 1.66
SNX13-206ENST00000474067 TTLL12Q14166 644 aaPredicted RBP25.41■■□□□ 1.66
SNX13-206ENST00000474067 ATG9AQ7Z3C6 839 aa25.41■■□□□ 1.66
SNX13-206ENST00000474067 SEMA3EO15041 775 aa25.4■■□□□ 1.66
SNX13-206ENST00000474067 CHAF1AQ13111 956 aaPredicted RBP25.4■■□□□ 1.66
SNX13-206ENST00000474067 SUPT20HL1Q3ZLR7 823 aa25.4■■□□□ 1.66
SNX13-206ENST00000474067 DZIP1LQ8IYY4 767 aaKnown RBP25.4■■□□□ 1.66
SNX13-206ENST00000474067 JAG2Q9Y219 1238 aa25.4■■□□□ 1.66
SNX13-206ENST00000474067 TNNI2P48788 182 aa25.39■■□□□ 1.66
SNX13-206ENST00000474067 BCAMP50895 628 aa25.39■■□□□ 1.66
SNX13-206ENST00000474067 MRIQ9BWK5 157 aa25.39■■□□□ 1.66
SNX13-206ENST00000474067 PPP1R12BO60237 982 aaPredicted RBP25.38■■□□□ 1.65
SNX13-206ENST00000474067 TNS4Q8IZW8 715 aa25.38■■□□□ 1.65
SNX13-206ENST00000474067 TEKT1Q969V4 418 aa25.38■■□□□ 1.65
SNX13-206ENST00000474067 DEFB129Q9H1M3 183 aa25.38■■□□□ 1.65
SNX13-206ENST00000474067 UNCXA6NJT0 531 aa25.37■■□□□ 1.65
SNX13-206ENST00000474067 ZBTB22O15209 634 aa25.37■■□□□ 1.65
SNX13-206ENST00000474067 AOC2O75106 756 aa25.37■■□□□ 1.65
SNX13-206ENST00000474067 ZGPATQ8N5A5 531 aaKnown RBP25.37■■□□□ 1.65
SNX13-206ENST00000474067 TMEM57Q8N5G2 664 aa25.37■■□□□ 1.65
SNX13-206ENST00000474067 VEZTQ9HBM0 779 aa25.37■■□□□ 1.65
SNX13-206ENST00000474067 TMOD2Q9NZR1 351 aa25.37■■□□□ 1.65
SNX13-206ENST00000474067 SLC10A3P09131 477 aa25.36■■□□□ 1.65
SNX13-206ENST00000474067 COL13A1Q5TAT6 717 aaPredicted RBP25.36■■□□□ 1.65
SNX13-206ENST00000474067 DLK2Q6UY11 383 aa25.36■■□□□ 1.65
SNX13-206ENST00000474067 DENND2AQ9ULE3 1009 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms