RNA–Protein interactions for RNA: ENST00000472610.5

COMMD3-210, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-210ENST00000472610 ADM5C9JUS6 153 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 WNT10BO00744 389 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 GNAI2P04899 355 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 FGFR2P21802 821 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 MTX1Q13505 466 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 NBPF9Q3BBW0 867 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 ATG9AQ7Z3C6 839 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 SAPCD2Q86UD0 394 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 CERS5Q8N5B7 392 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 TMEM57Q8N5G2 664 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 HHIPL1Q96JK4 782 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 COPRSQ9NQ92 184 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 CEP126Q9P2H0 1117 aa21.23■□□□□ 0.99
COMMD3-210ENST00000472610 SLC5A1P13866 664 aa21.22■□□□□ 0.99
COMMD3-210ENST00000472610 IL15P40933 162 aaPredicted RBP21.22■□□□□ 0.99
COMMD3-210ENST00000472610 FTSJ3Q8IY81 847 aaKnown RBP21.22■□□□□ 0.99
COMMD3-210ENST00000472610 DZIP1LQ8IYY4 767 aaKnown RBP21.22■□□□□ 0.99
COMMD3-210ENST00000472610 LPIN2Q92539 896 aa21.22■□□□□ 0.99
COMMD3-210ENST00000472610 SIL1Q9H173 461 aa21.22■□□□□ 0.99
COMMD3-210ENST00000472610 WDR33Q9C0J8 1336 aaKnown RBP21.22■□□□□ 0.99
COMMD3-210ENST00000472610 SRGAP3O43295 1099 aa21.21■□□□□ 0.99
COMMD3-210ENST00000472610 FRAT2O75474 233 aaPredicted RBP21.21■□□□□ 0.99
COMMD3-210ENST00000472610 DLGAP5Q15398 846 aa21.21■□□□□ 0.99
COMMD3-210ENST00000472610 C2orf69Q8N8R5 385 aa21.21■□□□□ 0.99
COMMD3-210ENST00000472610 MTMR14Q8NCE2 650 aa21.21■□□□□ 0.99
COMMD3-210ENST00000472610 MFSD14BQ5SR56 506 aa21.2■□□□□ 0.98
COMMD3-210ENST00000472610 PAXIP1Q6ZW49 1069 aaPredicted RBP21.2■□□□□ 0.98
COMMD3-210ENST00000472610 ZBED3Q96IU2 234 aaPredicted RBP21.2■□□□□ 0.98
COMMD3-210ENST00000472610 CAPNS2Q96L46 248 aa21.2■□□□□ 0.98
COMMD3-210ENST00000472610 GBA2Q9HCG7 927 aaPredicted RBP21.2■□□□□ 0.98
COMMD3-210ENST00000472610 HSPA1AP0DMV8 641 aaKnown RBP21.19■□□□□ 0.98
COMMD3-210ENST00000472610 HSPA1BP0DMV9 641 aaKnown RBP21.19■□□□□ 0.98
COMMD3-210ENST00000472610 DLK2Q6UY11 383 aa21.19■□□□□ 0.98
COMMD3-210ENST00000472610 TBC1D22AQ8WUA7 517 aa21.19■□□□□ 0.98
COMMD3-210ENST00000472610 CDCA5Q96FF9 252 aa21.19■□□□□ 0.98
COMMD3-210ENST00000472610 PA2G4Q9UQ80 394 aaKnown RBP21.19■□□□□ 0.98
COMMD3-210ENST00000472610 JAG2Q9Y219 1238 aa21.19■□□□□ 0.98
COMMD3-210ENST00000472610 F8W031 263 aaPredicted RBP21.18■□□□□ 0.98
COMMD3-210ENST00000472610 MS4A1P11836 297 aa21.18■□□□□ 0.98
COMMD3-210ENST00000472610 BCAMP50895 628 aa21.18■□□□□ 0.98
COMMD3-210ENST00000472610 APOBEC3FQ8IUX4 373 aaKnown RBP21.18■□□□□ 0.98
COMMD3-210ENST00000472610 MYO1BO43795 1136 aa21.17■□□□□ 0.98
COMMD3-210ENST00000472610 HUNKP57058 714 aa21.17■□□□□ 0.98
COMMD3-210ENST00000472610 ATP2B3Q16720 1220 aa21.17■□□□□ 0.98
COMMD3-210ENST00000472610 CFAP100Q494V2 611 aa21.17■□□□□ 0.98
COMMD3-210ENST00000472610 CYP4F22Q6NT55 531 aa21.17■□□□□ 0.98
COMMD3-210ENST00000472610 IQSEC3Q9UPP2 1182 aaPredicted RBP21.17■□□□□ 0.98
COMMD3-210ENST00000472610 ARAP2Q8WZ64 1704 aa21.17■□□□□ 0.98
COMMD3-210ENST00000472610 ECM29Q5VYK3 1845 aa21.17■□□□□ 0.98
COMMD3-210ENST00000472610 FKBP1BP68106 108 aa21.16■□□□□ 0.98
COMMD3-210ENST00000472610 MAP2K1Q02750 393 aaPredicted RBP21.16■□□□□ 0.98
COMMD3-210ENST00000472610 ITPRIPQ8IWB1 547 aa21.16■□□□□ 0.98
COMMD3-210ENST00000472610 TTF2Q9UNY4 1162 aaKnown RBP21.16■□□□□ 0.98
COMMD3-210ENST00000472610 MAP2K2P36507 400 aa21.15■□□□□ 0.98
COMMD3-210ENST00000472610 RBM5P52756 815 aaKnown RBP eCLIP21.15■□□□□ 0.98
COMMD3-210ENST00000472610 CHAF1AQ13111 956 aaPredicted RBP21.15■□□□□ 0.98
COMMD3-210ENST00000472610 GNL3LQ9NVN8 582 aaKnown RBP21.15■□□□□ 0.98
COMMD3-210ENST00000472610 SERPINA10Q9UK55 444 aa21.15■□□□□ 0.98
COMMD3-210ENST00000472610 AKAP2Q9Y2D5 859 aa21.15■□□□□ 0.98
COMMD3-210ENST00000472610 MYH13Q9UKX3 1938 aa21.14■□□□□ 0.98
COMMD3-210ENST00000472610 SPDYE2BA6NHP3 402 aa21.14■□□□□ 0.97
COMMD3-210ENST00000472610 ZBTB7BO15156 539 aaPredicted RBP21.14■□□□□ 0.97
COMMD3-210ENST00000472610 SPDYE6P0CI01 402 aa21.14■□□□□ 0.97
COMMD3-210ENST00000472610 RLBP1P12271 317 aa21.14■□□□□ 0.97
COMMD3-210ENST00000472610 NF2P35240 595 aa21.14■□□□□ 0.97
COMMD3-210ENST00000472610 GRM1Q13255 1194 aa21.14■□□□□ 0.97
COMMD3-210ENST00000472610 AIDAQ96BJ3 306 aa21.14■□□□□ 0.97
COMMD3-210ENST00000472610 SUGT1Q9Y2Z0 365 aa21.14■□□□□ 0.97
COMMD3-210ENST00000472610 HDLBPQ00341 1268 aaKnown RBP21.13■□□□□ 0.97
COMMD3-210ENST00000472610 RGMBQ6NW40 437 aa21.13■□□□□ 0.97
COMMD3-210ENST00000472610 WDR66Q8TBY9 1149 aa21.13■□□□□ 0.97
COMMD3-210ENST00000472610 PRMT6Q96LA8 375 aaPredicted RBP21.13■□□□□ 0.97
COMMD3-210ENST00000472610 WBP1LQ9NX94 342 aa21.13■□□□□ 0.97
COMMD3-210ENST00000472610 THSD7BQ9C0I4 1608 aa21.13■□□□□ 0.97
COMMD3-210ENST00000472610 COL1A1P02452 1464 aaPredicted RBP21.13■□□□□ 0.97
COMMD3-210ENST00000472610 PNMA6EA0A0J9YXQ4 647 aa21.12■□□□□ 0.97
COMMD3-210ENST00000472610 ATP8B2P98198 1209 aa21.12■□□□□ 0.97
COMMD3-210ENST00000472610 G3BP1Q13283 466 aaKnown RBP eCLIP21.12■□□□□ 0.97
COMMD3-210ENST00000472610 CCDC102AQ96A19 550 aa21.12■□□□□ 0.97
COMMD3-210ENST00000472610 MRIQ9BWK5 157 aa21.12■□□□□ 0.97
COMMD3-210ENST00000472610 SCAF8Q9UPN6 1271 aaKnown RBP21.12■□□□□ 0.97
COMMD3-210ENST00000472610 MAST3O60307 1309 aa21.11■□□□□ 0.97
COMMD3-210ENST00000472610 PAPPA2Q9BXP8 1791 aa21.11■□□□□ 0.97
COMMD3-210ENST00000472610 SEMA3EO15041 775 aa21.11■□□□□ 0.97
COMMD3-210ENST00000472610 ZBTB22O15209 634 aa21.11■□□□□ 0.97
COMMD3-210ENST00000472610 RCAN3Q9UKA8 241 aa21.11■□□□□ 0.97
COMMD3-210ENST00000472610 PCDHAC2Q9Y5I4 1007 aa21.11■□□□□ 0.97
COMMD3-210ENST00000472610 PPP2R3BQ9Y5P8 575 aa21.11■□□□□ 0.97
COMMD3-210ENST00000472610 CRKP46108 304 aa21.1■□□□□ 0.97
COMMD3-210ENST00000472610 TFCP2Q12800 502 aa21.1■□□□□ 0.97
COMMD3-210ENST00000472610 NOGQ13253 232 aa21.1■□□□□ 0.97
COMMD3-210ENST00000472610 POLA2Q14181 598 aa21.1■□□□□ 0.97
COMMD3-210ENST00000472610 PRAMEF18Q5VWM3 479 aa21.1■□□□□ 0.97
COMMD3-210ENST00000472610 DEFB129Q9H1M3 183 aa21.1■□□□□ 0.97
COMMD3-210ENST00000472610 DENND2AQ9ULE3 1009 aa21.1■□□□□ 0.97
COMMD3-210ENST00000472610 A0A1B0GUL7 405 aa21.09■□□□□ 0.97
COMMD3-210ENST00000472610 AOC2O75106 756 aa21.09■□□□□ 0.97
COMMD3-210ENST00000472610 ZNF157P51786 506 aaPredicted RBP21.09■□□□□ 0.97
COMMD3-210ENST00000472610 TIMM10P62072 90 aa21.09■□□□□ 0.97
COMMD3-210ENST00000472610 PANK1Q8TE04 598 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms