RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 SLC5A1P13866 664 aa11.38□□□□□ -0.59
SYN3-211ENST00000472027 FKBP1AP62942 108 aaKnown RBP11.38□□□□□ -0.59
SYN3-211ENST00000472027 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
SYN3-211ENST00000472027 IQSEC3Q9UPP2 1182 aaPredicted RBP11.38□□□□□ -0.59
SYN3-211ENST00000472027 A0A1B0GUL6 1792 aa11.38□□□□□ -0.59
SYN3-211ENST00000472027 FAM205AQ6ZU69 1335 aa11.37□□□□□ -0.59
SYN3-211ENST00000472027 F8W031 263 aaPredicted RBP11.37□□□□□ -0.59
SYN3-211ENST00000472027 WNT10BO00744 389 aa11.37□□□□□ -0.59
SYN3-211ENST00000472027 FRAT2O75474 233 aaPredicted RBP11.37□□□□□ -0.59
SYN3-211ENST00000472027 NBPF9Q3BBW0 867 aa11.37□□□□□ -0.59
SYN3-211ENST00000472027 ANGEL2Q5VTE6 544 aaKnown RBP11.37□□□□□ -0.59
SYN3-211ENST00000472027 DLK2Q6UY11 383 aa11.37□□□□□ -0.59
SYN3-211ENST00000472027 KRT26Q7Z3Y9 468 aa11.37□□□□□ -0.59
SYN3-211ENST00000472027 C1orf115Q9H7X2 142 aa11.37□□□□□ -0.59
SYN3-211ENST00000472027 GGA3Q9NZ52 723 aa11.37□□□□□ -0.59
SYN3-211ENST00000472027 MKRN1Q9UHC7 482 aaKnown RBP11.37□□□□□ -0.59
SYN3-211ENST00000472027 PSME4Q14997 1843 aa11.37□□□□□ -0.59
SYN3-211ENST00000472027 ADM5C9JUS6 153 aa11.36□□□□□ -0.59
SYN3-211ENST00000472027 CELF2O95319 508 aaKnown RBP11.36□□□□□ -0.59
SYN3-211ENST00000472027 TIMM10P62072 90 aa11.36□□□□□ -0.59
SYN3-211ENST00000472027 ATP2B3Q16720 1220 aa11.36□□□□□ -0.59
SYN3-211ENST00000472027 MFSD14BQ5SR56 506 aa11.36□□□□□ -0.59
SYN3-211ENST00000472027 SULF1Q8IWU6 871 aa11.36□□□□□ -0.59
SYN3-211ENST00000472027 YTHDC1Q96MU7 727 aaKnown RBP11.36□□□□□ -0.59
SYN3-211ENST00000472027 ZNF408Q9H9D4 720 aa11.36□□□□□ -0.59
SYN3-211ENST00000472027 ABT1Q9ULW3 272 aaKnown RBP11.36□□□□□ -0.59
SYN3-211ENST00000472027 TFCP2Q12800 502 aa11.35□□□□□ -0.59
SYN3-211ENST00000472027 CHAF1AQ13111 956 aaPredicted RBP11.35□□□□□ -0.59
SYN3-211ENST00000472027 G3BP1Q13283 466 aaKnown RBP eCLIP11.35□□□□□ -0.59
SYN3-211ENST00000472027 POLA2Q14181 598 aa11.35□□□□□ -0.59
SYN3-211ENST00000472027 MVPQ14764 893 aaKnown RBP11.35□□□□□ -0.59
SYN3-211ENST00000472027 DEFB115Q30KQ5 88 aa11.35□□□□□ -0.59
SYN3-211ENST00000472027 JMYQ8N9B5 988 aa11.35□□□□□ -0.59
SYN3-211ENST00000472027 SSH3Q8TE77 659 aa11.35□□□□□ -0.59
SYN3-211ENST00000472027 SCAF8Q9UPN6 1271 aaKnown RBP11.35□□□□□ -0.59
SYN3-211ENST00000472027 COG6Q9Y2V7 657 aa11.35□□□□□ -0.59
SYN3-211ENST00000472027 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.35□□□□□ -0.59
SYN3-211ENST00000472027 PITPNM2Q9BZ72 1349 aa11.35□□□□□ -0.59
SYN3-211ENST00000472027 CNTNAP1P78357 1384 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 RASSF10A6NK89 507 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 DLGAP5Q15398 846 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 CFAP100Q494V2 611 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.34□□□□□ -0.59
SYN3-211ENST00000472027 MTMR14Q8NCE2 650 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 TBC1D22AQ8WUA7 517 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 ZBED3Q96IU2 234 aaPredicted RBP11.34□□□□□ -0.59
SYN3-211ENST00000472027 TTF2Q9UNY4 1162 aaKnown RBP11.34□□□□□ -0.59
SYN3-211ENST00000472027 AKAP2Q9Y2D5 859 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 PCDHAC2Q9Y5I4 1007 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 TLL2Q9Y6L7 1015 aa11.34□□□□□ -0.59
SYN3-211ENST00000472027 ZNF646O15015 1829 aaPredicted RBP11.34□□□□□ -0.59
SYN3-211ENST00000472027 A0A1B0GUL7 405 aa11.33□□□□□ -0.6
SYN3-211ENST00000472027 SURF6O75683 361 aaKnown RBP11.33□□□□□ -0.6
SYN3-211ENST00000472027 ADORA1P30542 326 aa11.33□□□□□ -0.6
SYN3-211ENST00000472027 VEGFBP49765 207 aa11.33□□□□□ -0.6
SYN3-211ENST00000472027 RBM5P52756 815 aaKnown RBP eCLIP11.33□□□□□ -0.6
SYN3-211ENST00000472027 GRIK5Q16478 980 aa11.33□□□□□ -0.6
SYN3-211ENST00000472027 CEP85Q6P2H3 762 aa11.33□□□□□ -0.6
SYN3-211ENST00000472027 SAPCD2Q86UD0 394 aa11.33□□□□□ -0.6
SYN3-211ENST00000472027 CDCA5Q96FF9 252 aa11.33□□□□□ -0.6
SYN3-211ENST00000472027 PRMT6Q96LA8 375 aaPredicted RBP11.33□□□□□ -0.6
SYN3-211ENST00000472027 GNL3LQ9NVN8 582 aaKnown RBP11.33□□□□□ -0.6
SYN3-211ENST00000472027 DDX19BQ9UMR2 479 aa11.33□□□□□ -0.6
SYN3-211ENST00000472027 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 PHKA1P46020 1223 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 PDE3AQ14432 1141 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 C20orf194Q5TEA3 1177 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 CCDC102BQ68D86 513 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 PIAS4Q8N2W9 510 aaPredicted RBP11.32□□□□□ -0.6
SYN3-211ENST00000472027 XAGE2Q96GT9 111 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 NEUROD6Q96NK8 337 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 SERPINA10Q9UK55 444 aa11.32□□□□□ -0.6
SYN3-211ENST00000472027 NOP58Q9Y2X3 529 aaKnown RBP11.32□□□□□ -0.6
SYN3-211ENST00000472027 MYO1BO43795 1136 aa11.31□□□□□ -0.6
SYN3-211ENST00000472027 CRKP46108 304 aa11.31□□□□□ -0.6
SYN3-211ENST00000472027 OS9Q13438 667 aaPredicted RBP11.31□□□□□ -0.6
SYN3-211ENST00000472027 PRAMEF18Q5VWM3 479 aa11.31□□□□□ -0.6
SYN3-211ENST00000472027 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
SYN3-211ENST00000472027 C2orf69Q8N8R5 385 aa11.31□□□□□ -0.6
SYN3-211ENST00000472027 WDR66Q8TBY9 1149 aa11.31□□□□□ -0.6
SYN3-211ENST00000472027 CHMP4BQ9H444 224 aaKnown RBP11.31□□□□□ -0.6
SYN3-211ENST00000472027 GBA2Q9HCG7 927 aaPredicted RBP11.31□□□□□ -0.6
SYN3-211ENST00000472027 DENND2AQ9ULE3 1009 aa11.31□□□□□ -0.6
SYN3-211ENST00000472027 SUGT1Q9Y2Z0 365 aa11.31□□□□□ -0.6
SYN3-211ENST00000472027 WDR33Q9C0J8 1336 aaKnown RBP11.31□□□□□ -0.6
SYN3-211ENST00000472027 CLRN2A0PK11 232 aa11.3□□□□□ -0.6
SYN3-211ENST00000472027 SEMA3EO15041 775 aa11.3□□□□□ -0.6
SYN3-211ENST00000472027 ZBTB22O15209 634 aa11.3□□□□□ -0.6
SYN3-211ENST00000472027 ECE1P42892 770 aa11.3□□□□□ -0.6
SYN3-211ENST00000472027 HDLBPQ00341 1268 aaKnown RBP11.3□□□□□ -0.6
SYN3-211ENST00000472027 CYP4F22Q6NT55 531 aa11.3□□□□□ -0.6
SYN3-211ENST00000472027 PAXIP1Q6ZW49 1069 aaPredicted RBP11.3□□□□□ -0.6
SYN3-211ENST00000472027 RPAP2Q8IXW5 612 aaPredicted RBP11.3□□□□□ -0.6
SYN3-211ENST00000472027 HHIPL1Q96JK4 782 aa11.3□□□□□ -0.6
SYN3-211ENST00000472027 MRIQ9BWK5 157 aa11.3□□□□□ -0.6
SYN3-211ENST00000472027 HUNKP57058 714 aa11.29□□□□□ -0.6
SYN3-211ENST00000472027 GRM1Q13255 1194 aa11.29□□□□□ -0.6
SYN3-211ENST00000472027 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms