RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	POLR1A	O95602	1720 aa	Predicted RBP	5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438		A6NJR5	290 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	WISP1	O95388	367 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	NRL	P54845	237 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	CLDN10	P78369	228 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	BEND4	Q6ZU67	534 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	VSIG10L	Q86VR7	867 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	PROSER2	Q86WR7	435 aa	Predicted RBP	5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	OGFOD1	Q8N543	542 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	IFT43	Q96FT9	208 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	MUC3B	Q9H195	1237 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	ATG3	Q9NT62	314 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	LEMD3	Q9Y2U8	911 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	PTPRK	Q15262	1439 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	CD109	Q6YHK3	1445 aa		5.11	□□□□□ -1.59
CSMD2-208	ENST00000471438	TGFBR3L	H3BV60	316 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438		M0R2N6	131 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	SART1	O43290	800 aa	Known RBP	5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	PPP1R12B	O60237	982 aa	Predicted RBP	5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	SASH3	O75995	380 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	FARP2	O94887	1054 aa	Predicted RBP	5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	GHRH	P01286	108 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	PRNP	P04156	253 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	C1QTNF8	P60827	252 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	MSMP	Q1L6U9	139 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	PHLDB1	Q86UU1	1377 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	NGLY1	Q96IV0	654 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	MFSD14A	Q96MC6	490 aa		5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	YTHDC1	Q96MU7	727 aa	Known RBP	5.1	□□□□□ -1.59
CSMD2-208	ENST00000471438	GCC2	Q8IWJ2	1684 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	NCAN	O14594	1321 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438		J3QW42	95 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	PRRG2	O14669	202 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	BMP3	P12645	472 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	GRN	P28799	593 aa	Known RBP	5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	CD68	P34810	354 aa	Predicted RBP	5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	MLEC	Q14165	292 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	COL19A1	Q14993	1142 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	KRTAP19-4	Q3LI73	84 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	GALNT11	Q8NCW6	608 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	GLMN	Q92990	594 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	RBSN	Q9H1K0	784 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	PPME1	Q9Y570	386 aa		5.09	□□□□□ -1.59
CSMD2-208	ENST00000471438	CAMSAP1	Q5T5Y3	1602 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	FRMPD1	Q5SYB0	1578 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	CPS1	P31327	1500 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	KDM5B	Q9UGL1	1544 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	LOC102724428	A0A0B4J2F2	783 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	FOSL1	P15407	271 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	RASA1	P20936	1047 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	CEBPA	P49715	358 aa	Predicted RBP	5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	SIK1	P57059	783 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	LILRA6	Q6PI73	481 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	LARP1	Q6PKG0	1096 aa	Known RBP	5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	NFXL1	Q6ZNB6	911 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	KSR1	Q8IVT5	923 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	SIX5	Q8N196	739 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	CACTIN-AS1	Q8N1I8	211 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	AGBL5	Q8NDL9	886 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	GAS2L2	Q8NHY3	880 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	ZNF594	Q96JF6	807 aa	Predicted RBP	5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	TFIP11	Q9UBB9	837 aa	Known RBP	5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	DMGDH	Q9UI17	866 aa	Known RBP	5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	MAFB	Q9Y5Q3	323 aa	Predicted RBP	5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	SUPT6H	Q7KZ85	1726 aa	Known RBP	5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	SIGLEC1	Q9BZZ2	1709 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	ZCCHC11	Q5TAX3	1644 aa	Known RBP	5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	PTPN23	Q9H3S7	1636 aa		5.08	□□□□□ -1.6
CSMD2-208	ENST00000471438	WDR7	Q9Y4E6	1490 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	HFM1	A2PYH4	1435 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	FMN1	Q68DA7	1419 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	PAPLN	O95428	1278 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	SEC13	P55735	322 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	DUOXA2	Q1HG44	320 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	KIAA1211	Q6ZU35	1233 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	HINFP	Q9BQA5	517 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	OSBPL1A	Q9BXW6	950 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	C11orf16	Q9NQ32	467 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	KCNK4	Q9NYG8	393 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	TLR7	Q9NYK1	1049 aa	Known RBP	5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	TRIM33	Q9UPN9	1127 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	HECW1	Q76N89	1606 aa		5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	TCOF1	Q13428	1488 aa	Known RBP	5.07	□□□□□ -1.6
CSMD2-208	ENST00000471438	PTPRG	P23470	1445 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	AKNA	Q7Z591	1439 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	UACA	Q9BZF9	1416 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	ATAD2	Q6PL18	1390 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	NHSL1	Q5SYE7	1610 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438		B8ZZF3	427 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	LINC01387	J3KSC0	135 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	RAPGEF3	O95398	923 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	INPP5B	P32019	993 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	IDH3A	P50213	366 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	FBXL6	Q8N531	539 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	TSEN2	Q8NCE0	465 aa	Known RBP	5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	FLCN	Q8NFG4	579 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	CALR3	Q96L12	384 aa	Known RBP	5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	BCS1L	Q9Y276	419 aa		5.06	□□□□□ -1.6
CSMD2-208	ENST00000471438	HIF3A	Q9Y2N7	669 aa		5.06	□□□□□ -1.6

Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms