RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 GPR101Q96P66 508 aaPredicted RBP11.76□□□□□ -0.53
CCM2-204ENST00000470837 CD209Q9NNX6 404 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 ANO2Q9NQ90 1003 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 BCS1LQ9Y276 419 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 SPEF2Q9C093 1822 aa11.76□□□□□ -0.53
CCM2-204ENST00000470837 PPIP5K2O43314 1243 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 IGSF3O75054 1194 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 NMIQ13287 307 aaPredicted RBP11.75□□□□□ -0.53
CCM2-204ENST00000470837 TMED8Q6PL24 325 aaPredicted RBP11.75□□□□□ -0.53
CCM2-204ENST00000470837 ERICH6Q7L0X2 663 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 TXNRD3Q86VQ6 643 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 TDRD7Q8NHU6 1098 aaKnown RBP11.75□□□□□ -0.53
CCM2-204ENST00000470837 PSMD1Q99460 953 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 RTFDC1Q9BY42 306 aaPredicted RBP11.75□□□□□ -0.53
CCM2-204ENST00000470837 VPS33BQ9H267 617 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 ANTXR1Q9H6X2 564 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 HELLSQ9NRZ9 838 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 WWC3Q9ULE0 1092 aa11.75□□□□□ -0.53
CCM2-204ENST00000470837 ZBTB22O15209 634 aa11.74□□□□□ -0.53
CCM2-204ENST00000470837 SGSM2O43147 1006 aa11.74□□□□□ -0.53
CCM2-204ENST00000470837 IL1R1P14778 569 aa11.74□□□□□ -0.53
CCM2-204ENST00000470837 MCMDC2Q4G0Z9 681 aa11.74□□□□□ -0.53
CCM2-204ENST00000470837 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
CCM2-204ENST00000470837 DZIP1Q86YF9 867 aaKnown RBP11.74□□□□□ -0.53
CCM2-204ENST00000470837 APPBP2Q92624 585 aa11.74□□□□□ -0.53
CCM2-204ENST00000470837 PIH1D3Q9NQM4 214 aaKnown RBP11.74□□□□□ -0.53
CCM2-204ENST00000470837 TSHZ2Q9NRE2 1034 aa11.74□□□□□ -0.53
CCM2-204ENST00000470837 EPB41L2O43491 1005 aaKnown RBP11.73□□□□□ -0.53
CCM2-204ENST00000470837 LDHBP07195 334 aaKnown RBP11.73□□□□□ -0.53
CCM2-204ENST00000470837 COL11A2P13942 1736 aaPredicted RBP11.73□□□□□ -0.53
CCM2-204ENST00000470837 TAF1P21675 1872 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 ANP32AP39687 249 aaKnown RBP11.73□□□□□ -0.53
CCM2-204ENST00000470837 GSTO1P78417 241 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 KIAA2012Q0VF49 1180 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 UBE3CQ15386 1083 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 DOK7Q18PE1 504 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 SLC51AQ86UW1 340 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 SLF2Q8IX21 1173 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 LARGE2Q8N3Y3 721 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 MAGEB6Q8N7X4 407 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 FAM227BQ96M60 508 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 NOL10Q9BSC4 688 aaKnown RBP11.73□□□□□ -0.53
CCM2-204ENST00000470837 C22orf23Q9BZE7 217 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 FHDC1Q9C0D6 1143 aaPredicted RBP11.73□□□□□ -0.53
CCM2-204ENST00000470837 TAOK3Q9H2K8 898 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 IRS2Q9Y4H2 1338 aa11.73□□□□□ -0.53
CCM2-204ENST00000470837 SALL1Q9NSC2 1324 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 A0A0D9SFI3 127 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 SEC24BO95487 1268 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 PDE6AP16499 860 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 ADD2P35612 726 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 GTF2IP78347 998 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 AOC3Q16853 763 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 TTLL5Q6EMB2 1281 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 NAA16Q6N069 864 aaPredicted RBP11.72□□□□□ -0.53
CCM2-204ENST00000470837 NIM1KQ8IY84 436 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 JDP2Q8WYK2 163 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 AIDAQ96BJ3 306 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 JAG2Q9Y219 1238 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 ARAP2Q8WZ64 1704 aa11.72□□□□□ -0.53
CCM2-204ENST00000470837 CCDC171Q6TFL3 1326 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 ZNF532Q9HCE3 1301 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 ECE2O60344 883 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 LDHCP07864 332 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 CYP7A1P22680 504 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 MFSD14BQ5SR56 506 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 RNF20Q5VTR2 975 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 NLGN2Q8NFZ4 835 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 DBNDD1Q9H9R9 158 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 ZNF277Q9NRM2 450 aaPredicted RBP11.71□□□□□ -0.53
CCM2-204ENST00000470837 SUGT1Q9Y2Z0 365 aa11.71□□□□□ -0.53
CCM2-204ENST00000470837 LRRC37AA6NMS7 1700 aa11.71□□□□□ -0.54
CCM2-204ENST00000470837 MAST3O60307 1309 aa11.7□□□□□ -0.54
CCM2-204ENST00000470837 FAM205AQ6ZU69 1335 aa11.7□□□□□ -0.54
CCM2-204ENST00000470837 GNAT2P19087 354 aa11.7□□□□□ -0.54
CCM2-204ENST00000470837 CERS3Q8IU89 383 aa11.7□□□□□ -0.54
CCM2-204ENST00000470837 DDRGK1Q96HY6 314 aa11.7□□□□□ -0.54
CCM2-204ENST00000470837 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
CCM2-204ENST00000470837 USP17L3A6NCW0 530 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 USP17L4A6NCW7 530 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 BAG3O95817 575 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 APPP05067 770 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 ZKSCAN1P17029 563 aaPredicted RBP11.69□□□□□ -0.54
CCM2-204ENST00000470837 IARSP41252 1262 aaKnown RBP11.69□□□□□ -0.54
CCM2-204ENST00000470837 MECOMQ03112 1051 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 STRIP1Q5VSL9 837 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 USP17L1Q7RTZ2 530 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 OSBP2Q969R2 916 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 SYT17Q9BSW7 474 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 USP26Q9BXU7 913 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 NACAP1Q9BZK3 213 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 CTNNA3Q9UI47 895 aa11.69□□□□□ -0.54
CCM2-204ENST00000470837 RBM19Q9Y4C8 960 aaKnown RBP11.69□□□□□ -0.54
CCM2-204ENST00000470837 U3KPZ7 1027 aaPredicted RBP11.69□□□□□ -0.54
CCM2-204ENST00000470837 SLX4Q8IY92 1834 aa11.68□□□□□ -0.54
CCM2-204ENST00000470837 KIF13BQ9NQT8 1826 aa11.68□□□□□ -0.54
CCM2-204ENST00000470837 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
CCM2-204ENST00000470837 GPAA1O43292 621 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms