RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 NECAB3Q96P71 396 aaPredicted RBP6.32□□□□□ -1.4
PRPF3-204ENST00000470824 SMG9Q9H0W8 520 aaKnown RBP6.32□□□□□ -1.4
PRPF3-204ENST00000470824 SEC31BQ9NQW1 1179 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 FRRS1LQ9P0K9 344 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 PRKAG2Q9UGJ0 569 aa6.32□□□□□ -1.4
PRPF3-204ENST00000470824 ELOA3CA0A087WX78 387 aaPredicted RBP6.31□□□□□ -1.4
PRPF3-204ENST00000470824 ELOA3DA6NLF2 546 aaPredicted RBP6.31□□□□□ -1.4
PRPF3-204ENST00000470824 DNAJA1P31689 397 aaKnown RBP6.31□□□□□ -1.4
PRPF3-204ENST00000470824 PPP2R3AQ06190 1150 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 PAK2Q13177 524 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 MAP3K11Q16584 847 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 ELOA3BQ3SY89 546 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 FCHSD1Q86WN1 690 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 CACTIN-AS1Q8N1I8 211 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 GPR161Q8N6U8 529 aaKnown RBP6.31□□□□□ -1.4
PRPF3-204ENST00000470824 ELOA3Q8NG57 546 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 GMLQ99445 158 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 TRIM56Q9BRZ2 755 aaKnown RBP6.31□□□□□ -1.4
PRPF3-204ENST00000470824 SPON2Q9BUD6 331 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 ADAM19Q9H013 955 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 MUC3BQ9H195 1237 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 CLEC4MQ9H2X3 399 aaPredicted RBP6.31□□□□□ -1.4
PRPF3-204ENST00000470824 TMEM39AQ9NV64 488 aa6.31□□□□□ -1.4
PRPF3-204ENST00000470824 GPN3Q9UHW5 284 aaPredicted RBP6.31□□□□□ -1.4
PRPF3-204ENST00000470824 SHROOM4Q9ULL8 1493 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 CELA3AP09093 270 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 ATP2B1P20020 1258 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 EIF4A3P38919 411 aaKnown RBP6.3□□□□□ -1.4
PRPF3-204ENST00000470824 GJA8P48165 433 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 LIG3P49916 1009 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 PSAPL1Q6NUJ1 521 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 KIAA0825Q8IV33 1275 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 GOLGA6L1Q8N7Z2 621 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 TTC9Q92623 222 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 GPRASP2Q96D09 838 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 MDFIQ99750 246 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 LPIN3Q9BQK8 851 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 GGA1Q9UJY5 639 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 GDF2Q9UK05 429 aaPredicted RBP6.3□□□□□ -1.4
PRPF3-204ENST00000470824 NAGPAQ9UK23 515 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 SAMM50Q9Y512 469 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 IGF1RP08069 1367 aa6.3□□□□□ -1.4
PRPF3-204ENST00000470824 LOC105371045A0A1W2PR82 267 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 F6X3S4 739 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 ENC1O14682 589 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 RGS9O75916 674 aaPredicted RBP6.29□□□□□ -1.4
PRPF3-204ENST00000470824 CABP4P57796 275 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 RPS26P62854 115 aaKnown RBP6.29□□□□□ -1.4
PRPF3-204ENST00000470824 PCDH1Q08174 1060 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 FAAP100Q0VG06 881 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 TTBK2Q6IQ55 1244 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 PHC3Q8NDX5 983 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 SPATA32Q96LK8 384 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 COL25A1Q9BXS0 654 aaPredicted RBP6.29□□□□□ -1.4
PRPF3-204ENST00000470824 LACRTQ9GZZ8 138 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 ADAMTS1Q9UHI8 967 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 SOX13Q9UN79 622 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 TRIM33Q9UPN9 1127 aa6.29□□□□□ -1.4
PRPF3-204ENST00000470824 B3GALT4O96024 378 aa6.28□□□□□ -1.4
PRPF3-204ENST00000470824 VSIG8P0DPA2 414 aa6.28□□□□□ -1.4
PRPF3-204ENST00000470824 CDC27P30260 824 aa6.28□□□□□ -1.4
PRPF3-204ENST00000470824 ZNF157P51786 506 aaPredicted RBP6.28□□□□□ -1.4
PRPF3-204ENST00000470824 SLCO4C1Q6ZQN7 724 aa6.28□□□□□ -1.4
PRPF3-204ENST00000470824 VN1R5Q7Z5H4 357 aa6.28□□□□□ -1.4
PRPF3-204ENST00000470824 DDX54Q8TDD1 881 aaKnown RBP6.28□□□□□ -1.4
PRPF3-204ENST00000470824 ZNF296Q8WUU4 475 aaPredicted RBP6.28□□□□□ -1.4
PRPF3-204ENST00000470824 PAGE1O75459 146 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 PF4P02776 101 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 LMNB1P20700 586 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 LMNB2Q03252 620 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 SRSF11Q05519 484 aaKnown RBP6.27□□□□□ -1.41
PRPF3-204ENST00000470824 CAMK2GQ13555 558 aaPredicted RBP6.27□□□□□ -1.41
PRPF3-204ENST00000470824 IKBKEQ14164 716 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 ZNF423Q2M1K9 1284 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 PCNX4Q63HM2 1172 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 GDF6Q6KF10 455 aaPredicted RBP6.27□□□□□ -1.41
PRPF3-204ENST00000470824 AGMOQ6ZNB7 445 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 RASGRP4Q8TDF6 673 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 NUDT8Q8WV74 236 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 ARMC5Q96C12 935 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 RHOVQ96L33 236 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 SH2B1Q9NRF2 756 aaPredicted RBP6.27□□□□□ -1.41
PRPF3-204ENST00000470824 TLR6Q9Y2C9 796 aa6.27□□□□□ -1.41
PRPF3-204ENST00000470824 SUPT16HQ9Y5B9 1047 aaKnown RBP6.27□□□□□ -1.41
PRPF3-204ENST00000470824 ESRRAP11474 423 aaPredicted RBP6.26□□□□□ -1.41
PRPF3-204ENST00000470824 ATF4P18848 351 aaPredicted RBP6.26□□□□□ -1.41
PRPF3-204ENST00000470824 NME2P22392 152 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 GTF2F1P35269 517 aaKnown RBP eCLIP6.26□□□□□ -1.41
PRPF3-204ENST00000470824 FAM160A1Q05DH4 1040 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 LRRC14Q15048 493 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 RNFT1Q5M7Z0 435 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 SNAP47Q5SQN1 464 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 DIEXFQ68CQ4 756 aaKnown RBP6.26□□□□□ -1.41
PRPF3-204ENST00000470824 FBXL19Q6PCT2 694 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 EAF1Q96JC9 268 aaPredicted RBP6.26□□□□□ -1.41
PRPF3-204ENST00000470824 SEC16BQ96JE7 1060 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.26□□□□□ -1.41
PRPF3-204ENST00000470824 NT5C1AQ9BXI3 368 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 KCNQ5Q9NR82 932 aa6.26□□□□□ -1.41
PRPF3-204ENST00000470824 CYP8B1Q9UNU6 501 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms