RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 PUS3Q9BZE2 481 aaKnown RBP39.46■■■■□ 3.91
HMG20B-209ENST00000470356 RIPOR2Q9Y4F9 1068 aa39.45■■■■□ 3.91
HMG20B-209ENST00000470356 APOBEC3FQ8IUX4 373 aaKnown RBP39.44■■■■□ 3.9
HMG20B-209ENST00000470356 ANKRD44Q8N8A2 993 aa39.44■■■■□ 3.9
HMG20B-209ENST00000470356 CCER2I3L3R5 266 aa39.43■■■■□ 3.9
HMG20B-209ENST00000470356 MTMR14Q8NCE2 650 aa39.43■■■■□ 3.9
HMG20B-209ENST00000470356 USP44Q9H0E7 712 aa39.43■■■■□ 3.9
HMG20B-209ENST00000470356 AKAP11Q9UKA4 1901 aa39.43■■■■□ 3.9
HMG20B-209ENST00000470356 DLGAP5Q15398 846 aa39.42■■■■□ 3.9
HMG20B-209ENST00000470356 MOB2Q70IA6 237 aa39.42■■■■□ 3.9
HMG20B-209ENST00000470356 MROH5Q6ZUA9 1318 aa39.41■■■■□ 3.9
HMG20B-209ENST00000470356 NF2P35240 595 aa39.41■■■■□ 3.9
HMG20B-209ENST00000470356 RASAL3Q86YV0 1011 aa39.41■■■■□ 3.9
HMG20B-209ENST00000470356 ABHD8Q96I13 439 aa39.4■■■■□ 3.9
HMG20B-209ENST00000470356 SAGE1Q9NXZ1 904 aa39.4■■■■□ 3.9
HMG20B-209ENST00000470356 UBE2Q2LH0YL09 131 aa39.39■■■■□ 3.9
HMG20B-209ENST00000470356 REM2Q8IYK8 340 aaPredicted RBP39.39■■■■□ 3.9
HMG20B-209ENST00000470356 TDRD7Q8NHU6 1098 aaKnown RBP39.39■■■■□ 3.9
HMG20B-209ENST00000470356 CSRNP1Q96S65 589 aa39.39■■■■□ 3.9
HMG20B-209ENST00000470356 FAM205AQ6ZU69 1335 aa39.39■■■■□ 3.9
HMG20B-209ENST00000470356 HIBADHP31937 336 aaKnown RBP39.38■■■■□ 3.89
HMG20B-209ENST00000470356 FAM84BQ96KN1 310 aaPredicted RBP39.38■■■■□ 3.89
HMG20B-209ENST00000470356 SMC4Q9NTJ3 1288 aa39.38■■■■□ 3.89
HMG20B-209ENST00000470356 JAG2Q9Y219 1238 aa39.38■■■■□ 3.89
HMG20B-209ENST00000470356 F8W031 263 aaPredicted RBP39.37■■■■□ 3.89
HMG20B-209ENST00000470356 CT47B1P0C2W7 299 aaPredicted RBP39.37■■■■□ 3.89
HMG20B-209ENST00000470356 GYG1P46976 350 aa39.37■■■■□ 3.89
HMG20B-209ENST00000470356 TTLL12Q14166 644 aaPredicted RBP39.37■■■■□ 3.89
HMG20B-209ENST00000470356 ECM29Q5VYK3 1845 aa39.37■■■■□ 3.89
HMG20B-209ENST00000470356 CFAP100Q494V2 611 aa39.35■■■■□ 3.89
HMG20B-209ENST00000470356 RNF186Q9NXI6 227 aa39.35■■■■□ 3.89
HMG20B-209ENST00000470356 LRRC24Q50LG9 513 aa39.34■■■■□ 3.89
HMG20B-209ENST00000470356 COL1A1P02452 1464 aaPredicted RBP39.33■■■■□ 3.89
HMG20B-209ENST00000470356 SPDYE2BA6NHP3 402 aa39.33■■■■□ 3.89
HMG20B-209ENST00000470356 SPDYE6P0CI01 402 aa39.33■■■■□ 3.89
HMG20B-209ENST00000470356 DEFB129Q9H1M3 183 aa39.33■■■■□ 3.89
HMG20B-209ENST00000470356 PCDHAC2Q9Y5I4 1007 aa39.33■■■■□ 3.89
HMG20B-209ENST00000470356 MYO1BO43795 1136 aa39.32■■■■□ 3.89
HMG20B-209ENST00000470356 TRPA1O75762 1119 aa39.32■■■■□ 3.89
HMG20B-209ENST00000470356 METTL24Q5JXM2 366 aa39.32■■■■□ 3.89
HMG20B-209ENST00000470356 PRMT6Q96LA8 375 aaPredicted RBP39.32■■■■□ 3.89
HMG20B-209ENST00000470356 MFSD14BQ5SR56 506 aa39.31■■■■□ 3.88
HMG20B-209ENST00000470356 ARMC9Q7Z3E5 817 aa39.3■■■■□ 3.88
HMG20B-209ENST00000470356 FBXO33Q7Z6M2 555 aa39.3■■■■□ 3.88
HMG20B-209ENST00000470356 VGLL2Q8N8G2 317 aa39.3■■■■□ 3.88
HMG20B-209ENST00000470356 PDE8BO95263 885 aa39.29■■■■□ 3.88
HMG20B-209ENST00000470356 KLHDC4Q8TBB5 520 aa39.29■■■■□ 3.88
HMG20B-209ENST00000470356 PPP2R3BQ9Y5P8 575 aa39.29■■■■□ 3.88
HMG20B-209ENST00000470356 RBM5P52756 815 aaKnown RBP eCLIP39.26■■■■□ 3.88
HMG20B-209ENST00000470356 PTPN12Q05209 780 aaKnown RBP39.26■■■■□ 3.88
HMG20B-209ENST00000470356 PRKG1Q13976 671 aa39.26■■■■□ 3.88
HMG20B-209ENST00000470356 LDLRAD1Q5T700 205 aa39.26■■■■□ 3.88
HMG20B-209ENST00000470356 VPS37DQ86XT2 251 aa39.26■■■■□ 3.88
HMG20B-209ENST00000470356 NOB1Q9ULX3 412 aaKnown RBP39.26■■■■□ 3.88
HMG20B-209ENST00000470356 CLRN2A0PK11 232 aa39.25■■■■□ 3.87
HMG20B-209ENST00000470356 CAVIN4Q5BKX8 364 aa39.25■■■■□ 3.87
HMG20B-209ENST00000470356 MCOLN1Q9GZU1 580 aa39.25■■■■□ 3.87
HMG20B-209ENST00000470356 SERPINA10Q9UK55 444 aa39.25■■■■□ 3.87
HMG20B-209ENST00000470356 TTF2Q9UNY4 1162 aaKnown RBP39.25■■■■□ 3.87
HMG20B-209ENST00000470356 ANGEL1Q9UNK9 670 aaKnown RBP39.24■■■■□ 3.87
HMG20B-209ENST00000470356 ARAP2Q8WZ64 1704 aa39.23■■■■□ 3.87
HMG20B-209ENST00000470356 AOX1Q06278 1338 aa39.23■■■■□ 3.87
HMG20B-209ENST00000470356 RFX5P48382 616 aaPredicted RBP39.23■■■■□ 3.87
HMG20B-209ENST00000470356 API5Q9BZZ5 524 aaKnown RBP39.22■■■■□ 3.87
HMG20B-209ENST00000470356 VEZTQ9HBM0 779 aa39.22■■■■□ 3.87
HMG20B-209ENST00000470356 DGKZQ13574 1117 aa39.21■■■■□ 3.87
HMG20B-209ENST00000470356 IQSEC3Q9UPP2 1182 aaPredicted RBP39.21■■■■□ 3.87
HMG20B-209ENST00000470356 EYA2O00167 538 aa39.2■■■■□ 3.87
HMG20B-209ENST00000470356 UBTFL1P0CB47 393 aaPredicted RBP39.2■■■■□ 3.87
HMG20B-209ENST00000470356 PUM3Q15397 648 aaKnown RBP39.2■■■■□ 3.87
HMG20B-209ENST00000470356 MAP3K11Q16584 847 aa39.2■■■■□ 3.87
HMG20B-209ENST00000470356 SUPT20HL1Q3ZLR7 823 aa39.2■■■■□ 3.87
HMG20B-209ENST00000470356 KIF16BQ96L93 1317 aa39.19■■■■□ 3.86
HMG20B-209ENST00000470356 FGFR2P21802 821 aa39.19■■■■□ 3.86
HMG20B-209ENST00000470356 TM4SF4P48230 202 aa39.19■■■■□ 3.86
HMG20B-209ENST00000470356 TBC1D22AQ8WUA7 517 aa39.19■■■■□ 3.86
HMG20B-209ENST00000470356 PPP1R12BO60237 982 aaPredicted RBP39.18■■■■□ 3.86
HMG20B-209ENST00000470356 FRAT2O75474 233 aaPredicted RBP39.18■■■■□ 3.86
HMG20B-209ENST00000470356 BCAMP50895 628 aa39.18■■■■□ 3.86
HMG20B-209ENST00000470356 SPDYE2Q495Y8 402 aa39.18■■■■□ 3.86
HMG20B-209ENST00000470356 FZD1Q9UP38 647 aa39.18■■■■□ 3.86
HMG20B-209ENST00000470356 SSC5DA1L4H1 1573 aa39.17■■■■□ 3.86
HMG20B-209ENST00000470356 CCDC85CA6NKD9 419 aa39.17■■■■□ 3.86
HMG20B-209ENST00000470356 IFIT1P09914 478 aaKnown RBP39.17■■■■□ 3.86
HMG20B-209ENST00000470356 RARSP54136 660 aaKnown RBP39.17■■■■□ 3.86
HMG20B-209ENST00000470356 RASA3Q14644 834 aa39.17■■■■□ 3.86
HMG20B-209ENST00000470356 ZNF70Q9UC06 446 aaPredicted RBP39.17■■■■□ 3.86
HMG20B-209ENST00000470356 CHAF1AQ13111 956 aaPredicted RBP39.16■■■■□ 3.86
HMG20B-209ENST00000470356 DZIP1LQ8IYY4 767 aaKnown RBP39.16■■■■□ 3.86
HMG20B-209ENST00000470356 CRKP46108 304 aa39.15■■■■□ 3.86
HMG20B-209ENST00000470356 MKRN3Q13064 507 aaKnown RBP39.15■■■■□ 3.86
HMG20B-209ENST00000470356 TNFAIP1Q13829 316 aa39.15■■■■□ 3.86
HMG20B-209ENST00000470356 NBPF12Q5TAG4 269 aaPredicted RBP39.15■■■■□ 3.86
HMG20B-209ENST00000470356 SPRYD7Q5W111 196 aa39.15■■■■□ 3.86
HMG20B-209ENST00000470356 TDRD3Q9H7E2 651 aaKnown RBP39.15■■■■□ 3.86
HMG20B-209ENST00000470356 HDAC5Q9UQL6 1122 aa39.15■■■■□ 3.86
HMG20B-209ENST00000470356 UNCXA6NJT0 531 aa39.14■■■■□ 3.86
HMG20B-209ENST00000470356 HDLBPQ00341 1268 aaKnown RBP39.14■■■■□ 3.86
HMG20B-209ENST00000470356 GRIK5Q16478 980 aa39.14■■■■□ 3.86
HMG20B-209ENST00000470356 ATG9AQ7Z3C6 839 aa39.14■■■■□ 3.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms