RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CEP126Q9P2H0 1117 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 ARAP2Q8WZ64 1704 aa17.6■□□□□ 0.41
TOP3B-215ENST00000470338 ASTN2O75129 1339 aaPredicted RBP17.59■□□□□ 0.41
TOP3B-215ENST00000470338 PNMA6EA0A0J9YXQ4 647 aa17.59■□□□□ 0.41
TOP3B-215ENST00000470338 VPS37DQ86XT2 251 aa17.59■□□□□ 0.41
TOP3B-215ENST00000470338 KIAA0825Q8IV33 1275 aa17.59■□□□□ 0.41
TOP3B-215ENST00000470338 JMYQ8N9B5 988 aa17.59■□□□□ 0.41
TOP3B-215ENST00000470338 PANK1Q8TE04 598 aa17.59■□□□□ 0.41
TOP3B-215ENST00000470338 HDAC9Q9UKV0 1011 aa17.59■□□□□ 0.41
TOP3B-215ENST00000470338 PCNTO95613 3336 aa17.59■□□□□ 0.41
TOP3B-215ENST00000470338 ECM29Q5VYK3 1845 aa17.58■□□□□ 0.41
TOP3B-215ENST00000470338 SLC5A1P13866 664 aa17.58■□□□□ 0.4
TOP3B-215ENST00000470338 BCAMP50895 628 aa17.58■□□□□ 0.4
TOP3B-215ENST00000470338 NBPF9Q3BBW0 867 aa17.58■□□□□ 0.4
TOP3B-215ENST00000470338 KRT26Q7Z3Y9 468 aa17.58■□□□□ 0.4
TOP3B-215ENST00000470338 ZBED3Q96IU2 234 aaPredicted RBP17.58■□□□□ 0.4
TOP3B-215ENST00000470338 GGA3Q9NZ52 723 aa17.58■□□□□ 0.4
TOP3B-215ENST00000470338 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
TOP3B-215ENST00000470338 PITPNM2Q9BZ72 1349 aa17.57■□□□□ 0.4
TOP3B-215ENST00000470338 WNT10BO00744 389 aa17.57■□□□□ 0.4
TOP3B-215ENST00000470338 ATP8B2P98198 1209 aa17.57■□□□□ 0.4
TOP3B-215ENST00000470338 POLA2Q14181 598 aa17.57■□□□□ 0.4
TOP3B-215ENST00000470338 ATP2B3Q16720 1220 aa17.57■□□□□ 0.4
TOP3B-215ENST00000470338 ANGEL2Q5VTE6 544 aaKnown RBP17.57■□□□□ 0.4
TOP3B-215ENST00000470338 JAG2Q9Y219 1238 aa17.57■□□□□ 0.4
TOP3B-215ENST00000470338 RASSF10A6NK89 507 aa17.56■□□□□ 0.4
TOP3B-215ENST00000470338 CELF2O95319 508 aaKnown RBP17.56■□□□□ 0.4
TOP3B-215ENST00000470338 MFSD14BQ5SR56 506 aa17.56■□□□□ 0.4
TOP3B-215ENST00000470338 DLK2Q6UY11 383 aa17.56■□□□□ 0.4
TOP3B-215ENST00000470338 MTMR14Q8NCE2 650 aa17.56■□□□□ 0.4
TOP3B-215ENST00000470338 SSH3Q8TE77 659 aa17.56■□□□□ 0.4
TOP3B-215ENST00000470338 IQSEC3Q9UPP2 1182 aaPredicted RBP17.56■□□□□ 0.4
TOP3B-215ENST00000470338 ADM5C9JUS6 153 aa17.55■□□□□ 0.4
TOP3B-215ENST00000470338 DEFB115Q30KQ5 88 aa17.55■□□□□ 0.4
TOP3B-215ENST00000470338 SULF1Q8IWU6 871 aa17.55■□□□□ 0.4
TOP3B-215ENST00000470338 MKRN1Q9UHC7 482 aaKnown RBP17.55■□□□□ 0.4
TOP3B-215ENST00000470338 F8W031 263 aaPredicted RBP17.54■□□□□ 0.4
TOP3B-215ENST00000470338 ZBTB22O15209 634 aa17.54■□□□□ 0.4
TOP3B-215ENST00000470338 TFCP2Q12800 502 aa17.54■□□□□ 0.4
TOP3B-215ENST00000470338 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
TOP3B-215ENST00000470338 ABT1Q9ULW3 272 aaKnown RBP17.54■□□□□ 0.4
TOP3B-215ENST00000470338 TLL2Q9Y6L7 1015 aa17.54■□□□□ 0.4
TOP3B-215ENST00000470338 FRAT2O75474 233 aaPredicted RBP17.53■□□□□ 0.4
TOP3B-215ENST00000470338 G3BP1Q13283 466 aaKnown RBP eCLIP17.53■□□□□ 0.4
TOP3B-215ENST00000470338 MVPQ14764 893 aaKnown RBP17.53■□□□□ 0.4
TOP3B-215ENST00000470338 DLGAP5Q15398 846 aa17.53■□□□□ 0.4
TOP3B-215ENST00000470338 TBC1D22AQ8WUA7 517 aa17.53■□□□□ 0.4
TOP3B-215ENST00000470338 AKAP2Q9Y2D5 859 aa17.53■□□□□ 0.4
TOP3B-215ENST00000470338 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.53■□□□□ 0.4
TOP3B-215ENST00000470338 VEGFBP49765 207 aa17.52■□□□□ 0.4
TOP3B-215ENST00000470338 TIMM10P62072 90 aa17.52■□□□□ 0.4
TOP3B-215ENST00000470338 CHAF1AQ13111 956 aaPredicted RBP17.52■□□□□ 0.4
TOP3B-215ENST00000470338 CFAP100Q494V2 611 aa17.52■□□□□ 0.4
TOP3B-215ENST00000470338 SAPCD2Q86UD0 394 aa17.52■□□□□ 0.4
TOP3B-215ENST00000470338 ZNF408Q9H9D4 720 aa17.52■□□□□ 0.4
TOP3B-215ENST00000470338 TTF2Q9UNY4 1162 aaKnown RBP17.52■□□□□ 0.4
TOP3B-215ENST00000470338 SPDYE2BA6NHP3 402 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 SPDYE6P0CI01 402 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 ADORA1P30542 326 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 PDE3AQ14432 1141 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 GRIK5Q16478 980 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 CDCA5Q96FF9 252 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 HHIPL1Q96JK4 782 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 PRMT6Q96LA8 375 aaPredicted RBP17.51■□□□□ 0.39
TOP3B-215ENST00000470338 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
TOP3B-215ENST00000470338 SERPINA10Q9UK55 444 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 DDX19BQ9UMR2 479 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 COG6Q9Y2V7 657 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 PCDHAC2Q9Y5I4 1007 aa17.51■□□□□ 0.39
TOP3B-215ENST00000470338 A0A1B0GUL7 405 aa17.5■□□□□ 0.39
TOP3B-215ENST00000470338 PHKA1P46020 1223 aa17.5■□□□□ 0.39
TOP3B-215ENST00000470338 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
TOP3B-215ENST00000470338 CEP85Q6P2H3 762 aa17.5■□□□□ 0.39
TOP3B-215ENST00000470338 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.5■□□□□ 0.39
TOP3B-215ENST00000470338 WDR66Q8TBY9 1149 aa17.5■□□□□ 0.39
TOP3B-215ENST00000470338 MRIQ9BWK5 157 aa17.5■□□□□ 0.39
TOP3B-215ENST00000470338 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
TOP3B-215ENST00000470338 SCAF8Q9UPN6 1271 aaKnown RBP17.5■□□□□ 0.39
TOP3B-215ENST00000470338 NOP58Q9Y2X3 529 aaKnown RBP17.5■□□□□ 0.39
TOP3B-215ENST00000470338 SUGT1Q9Y2Z0 365 aa17.5■□□□□ 0.39
TOP3B-215ENST00000470338 SEMA3EO15041 775 aa17.49■□□□□ 0.39
TOP3B-215ENST00000470338 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
TOP3B-215ENST00000470338 APOBEC3FQ8IUX4 373 aaKnown RBP17.49■□□□□ 0.39
TOP3B-215ENST00000470338 XAGE2Q96GT9 111 aa17.49■□□□□ 0.39
TOP3B-215ENST00000470338 GBA2Q9HCG7 927 aaPredicted RBP17.49■□□□□ 0.39
TOP3B-215ENST00000470338 COL1A1P02452 1464 aaPredicted RBP17.49■□□□□ 0.39
TOP3B-215ENST00000470338 WDR33Q9C0J8 1336 aaKnown RBP17.48■□□□□ 0.39
TOP3B-215ENST00000470338 SURF6O75683 361 aaKnown RBP17.48■□□□□ 0.39
TOP3B-215ENST00000470338 RBM5P52756 815 aaKnown RBP eCLIP17.48■□□□□ 0.39
TOP3B-215ENST00000470338 C20orf194Q5TEA3 1177 aa17.48■□□□□ 0.39
TOP3B-215ENST00000470338 C2orf69Q8N8R5 385 aa17.48■□□□□ 0.39
TOP3B-215ENST00000470338 CHMP4BQ9H444 224 aaKnown RBP17.48■□□□□ 0.39
TOP3B-215ENST00000470338 GPR108Q9NPR9 543 aa17.48■□□□□ 0.39
TOP3B-215ENST00000470338 DENND2AQ9ULE3 1009 aa17.48■□□□□ 0.39
TOP3B-215ENST00000470338 AOX1Q06278 1338 aa17.47■□□□□ 0.39
TOP3B-215ENST00000470338 MYO1BO43795 1136 aa17.47■□□□□ 0.39
TOP3B-215ENST00000470338 ECE1P42892 770 aa17.47■□□□□ 0.39
TOP3B-215ENST00000470338 CRKP46108 304 aa17.47■□□□□ 0.39
TOP3B-215ENST00000470338 CAPNS2Q96L46 248 aa17.47■□□□□ 0.39
TOP3B-215ENST00000470338 YTHDC1Q96MU7 727 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms