RNA–Protein interactions for RNA: ENST00000469504.1

COL4A3-204, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL4A3, Length 521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-204ENST00000469504 TAF5LO75529 589 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 SASH1O94885 1247 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 DLGAP5Q15398 846 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 EPHA10Q5JZY3 1008 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 ARMC9Q7Z3E5 817 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 ZIC5Q96T25 663 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 MXD3Q9BW11 206 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 MROH5Q6ZUA9 1318 aa13.83□□□□□ -0.2
COL4A3-204ENST00000469504 ZNF646O15015 1829 aaPredicted RBP13.83□□□□□ -0.2
COL4A3-204ENST00000469504 UNCXA6NJT0 531 aa13.82□□□□□ -0.2
COL4A3-204ENST00000469504 CT47B1P0C2W7 299 aaPredicted RBP13.82□□□□□ -0.2
COL4A3-204ENST00000469504 ALDH1L2Q3SY69 923 aa13.82□□□□□ -0.2
COL4A3-204ENST00000469504 RABL6Q3YEC7 729 aaPredicted RBP13.82□□□□□ -0.2
COL4A3-204ENST00000469504 MRPL50Q8N5N7 158 aaKnown RBP13.82□□□□□ -0.2
COL4A3-204ENST00000469504 CSRNP1Q96S65 589 aa13.82□□□□□ -0.2
COL4A3-204ENST00000469504 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
COL4A3-204ENST00000469504 RNF186Q9NXI6 227 aa13.82□□□□□ -0.2
COL4A3-204ENST00000469504 TTLL12Q14166 644 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-204ENST00000469504 HELBQ8NG08 1087 aaPredicted RBP13.81□□□□□ -0.2
COL4A3-204ENST00000469504 SUCLG2Q96I99 432 aa13.81□□□□□ -0.2
COL4A3-204ENST00000469504 FAM205AQ6ZU69 1335 aa13.81□□□□□ -0.2
COL4A3-204ENST00000469504 NBPF7P0C2Y1 421 aaPredicted RBP13.8□□□□□ -0.2
COL4A3-204ENST00000469504 SLFN5Q08AF3 891 aa13.8□□□□□ -0.2
COL4A3-204ENST00000469504 TDRD7Q8NHU6 1098 aaKnown RBP13.8□□□□□ -0.2
COL4A3-204ENST00000469504 ZNF594Q96JF6 807 aaPredicted RBP13.8□□□□□ -0.2
COL4A3-204ENST00000469504 MCOLN1Q9GZU1 580 aa13.8□□□□□ -0.2
COL4A3-204ENST00000469504 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 SNAP23O00161 211 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 TRPA1O75762 1119 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 HIBADHP31937 336 aaKnown RBP13.79□□□□□ -0.2
COL4A3-204ENST00000469504 SREBF2Q12772 1141 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 TNFAIP1Q13829 316 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 MAP3K11Q16584 847 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 SUPT20HL1Q3ZLR7 823 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 NOM1Q5C9Z4 860 aaKnown RBP13.79□□□□□ -0.2
COL4A3-204ENST00000469504 CERS5Q8N5B7 392 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 KAZALD1Q96I82 304 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 BICC1Q9H694 974 aaKnown RBP13.79□□□□□ -0.2
COL4A3-204ENST00000469504 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 RIPOR2Q9Y4F9 1068 aa13.79□□□□□ -0.2
COL4A3-204ENST00000469504 UBE2Q2LH0YL09 131 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 PPP1R12BO60237 982 aaPredicted RBP13.78□□□□□ -0.2
COL4A3-204ENST00000469504 PLIN1O60240 522 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 TM4SF4P48230 202 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 DGKZQ13574 1117 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 CFAP100Q494V2 611 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 CAVIN4Q5BKX8 364 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 TBC1D22AQ8WUA7 517 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 SSH1Q8WYL5 1049 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 HDAC5Q9UQL6 1122 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 A0A1B0GUL6 1792 aa13.78□□□□□ -0.2
COL4A3-204ENST00000469504 RGS19P49795 217 aa13.77□□□□□ -0.21
COL4A3-204ENST00000469504 INHBEP58166 350 aa13.77□□□□□ -0.21
COL4A3-204ENST00000469504 MFSD14BQ5SR56 506 aa13.77□□□□□ -0.21
COL4A3-204ENST00000469504 LDLRAD1Q5T700 205 aa13.77□□□□□ -0.21
COL4A3-204ENST00000469504 PRAMEF18Q5VWM3 479 aa13.77□□□□□ -0.21
COL4A3-204ENST00000469504 VPS37DQ86XT2 251 aa13.77□□□□□ -0.21
COL4A3-204ENST00000469504 FAM84BQ96KN1 310 aaPredicted RBP13.77□□□□□ -0.21
COL4A3-204ENST00000469504 CFHR5Q9BXR6 569 aa13.77□□□□□ -0.21
COL4A3-204ENST00000469504 CCDC85CA6NKD9 419 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 CCER2I3L3R5 266 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 PDE8BO95263 885 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 ALDH1A1P00352 501 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 ZBTB48P10074 688 aaPredicted RBP13.76□□□□□ -0.21
COL4A3-204ENST00000469504 HDLBPQ00341 1268 aaKnown RBP13.76□□□□□ -0.21
COL4A3-204ENST00000469504 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
COL4A3-204ENST00000469504 METTL24Q5JXM2 366 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 MOB2Q70IA6 237 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 ANKRD44Q8N8A2 993 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 FBXO3Q9UK99 471 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 SCAF8Q9UPN6 1271 aaKnown RBP13.76□□□□□ -0.21
COL4A3-204ENST00000469504 SUGT1Q9Y2Z0 365 aa13.76□□□□□ -0.21
COL4A3-204ENST00000469504 AKAP11Q9UKA4 1901 aa13.75□□□□□ -0.21
COL4A3-204ENST00000469504 F8W031 263 aaPredicted RBP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 RBM5P52756 815 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 PTPN12Q05209 780 aaKnown RBP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 FBXO33Q7Z6M2 555 aa13.75□□□□□ -0.21
COL4A3-204ENST00000469504 CTU1Q7Z7A3 348 aaKnown RBP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 TRMT2AQ8IZ69 625 aaKnown RBP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 VGLL2Q8N8G2 317 aa13.75□□□□□ -0.21
COL4A3-204ENST00000469504 PRMT6Q96LA8 375 aaPredicted RBP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 MRIQ9BWK5 157 aa13.75□□□□□ -0.21
COL4A3-204ENST00000469504 PUS3Q9BZE2 481 aaKnown RBP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 USP44Q9H0E7 712 aa13.75□□□□□ -0.21
COL4A3-204ENST00000469504 SMC4Q9NTJ3 1288 aa13.75□□□□□ -0.21
COL4A3-204ENST00000469504 ANGEL1Q9UNK9 670 aaKnown RBP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 TTF2Q9UNY4 1162 aaKnown RBP13.75□□□□□ -0.21
COL4A3-204ENST00000469504 MANSC4A6NHS7 340 aaPredicted RBP13.74□□□□□ -0.21
COL4A3-204ENST00000469504 IFIT1P09914 478 aaKnown RBP13.74□□□□□ -0.21
COL4A3-204ENST00000469504 GYG1P46976 350 aa13.74□□□□□ -0.21
COL4A3-204ENST00000469504 IREB2P48200 963 aaKnown RBP13.74□□□□□ -0.21
COL4A3-204ENST00000469504 PUM3Q15397 648 aaKnown RBP13.74□□□□□ -0.21
COL4A3-204ENST00000469504 SPDYE2Q495Y8 402 aa13.74□□□□□ -0.21
COL4A3-204ENST00000469504 SPRYD7Q5W111 196 aa13.74□□□□□ -0.21
COL4A3-204ENST00000469504 VEZTQ9HBM0 779 aa13.74□□□□□ -0.21
COL4A3-204ENST00000469504 MAST3O60307 1309 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms