RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 PRR29P0C7W0 189 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 GYG1P46976 350 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 AOC3Q16853 763 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 CCDC102BQ68D86 513 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 SLC51AQ86UW1 340 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 C16orf71Q8IYS4 520 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-216ENST00000468949 JDP2Q8WYK2 163 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 GPR101Q96P66 508 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-216ENST00000468949 DNAJC2Q99543 621 aaKnown RBP9.89□□□□□ -0.83
HDAC6-216ENST00000468949 RTFDC1Q9BY42 306 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-216ENST00000468949 COA1Q9GZY4 146 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 ZNF277Q9NRM2 450 aaPredicted RBP9.89□□□□□ -0.83
HDAC6-216ENST00000468949 ARAP2Q8WZ64 1704 aa9.89□□□□□ -0.83
HDAC6-216ENST00000468949 TRIM6-TRIM34B2RNG4 842 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 PITPNM1O00562 1244 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 SEMA3EO15041 775 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 IARSP41252 1262 aaKnown RBP9.88□□□□□ -0.83
HDAC6-216ENST00000468949 PHKA1P46020 1223 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 BCAMP50895 628 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 PDE1AP54750 535 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 CHAF1AQ13111 956 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-216ENST00000468949 TSHZ3Q63HK5 1081 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 DPY19L2Q6NUT2 758 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 C15orf52Q6ZUT6 534 aaKnown RBP9.88□□□□□ -0.83
HDAC6-216ENST00000468949 OTUD7AQ8TE49 926 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-216ENST00000468949 VPS33BQ9H267 617 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 DENND2AQ9ULE3 1009 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.88□□□□□ -0.83
HDAC6-216ENST00000468949 SCN4AP35499 1836 aa9.88□□□□□ -0.83
HDAC6-216ENST00000468949 ECE2O60344 883 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 TOMM70O94826 608 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 KLRK1P26718 216 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 PDE4AP27815 886 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 KIAA2012Q0VF49 1180 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 LRRFIP1Q32MZ4 808 aaKnown RBP9.87□□□□□ -0.83
HDAC6-216ENST00000468949 PLEKHM2Q8IWE5 1019 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 CNTROBQ8N137 903 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 BOLA2Q9H3K6 86 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 DBNDD1Q9H9R9 158 aa9.87□□□□□ -0.83
HDAC6-216ENST00000468949 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
HDAC6-216ENST00000468949 ZNF541Q9H0D2 1346 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 VEGFAP15692 232 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-216ENST00000468949 ATP5JP18859 108 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 ARID4AP29374 1257 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-216ENST00000468949 TTF1Q15361 905 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-216ENST00000468949 DOK7Q18PE1 504 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 TTC22Q5TAA0 569 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 CASC1Q6TDU7 716 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 ZGPATQ8N5A5 531 aaKnown RBP9.86□□□□□ -0.83
HDAC6-216ENST00000468949 SPATA5Q8NB90 893 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 RBM46Q8TBY0 533 aaKnown RBP9.86□□□□□ -0.83
HDAC6-216ENST00000468949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.86□□□□□ -0.83
HDAC6-216ENST00000468949 RILPL2Q969X0 211 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 FAM84BQ96KN1 310 aaPredicted RBP9.86□□□□□ -0.83
HDAC6-216ENST00000468949 CD209Q9NNX6 404 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 STAP2Q9UGK3 403 aa9.86□□□□□ -0.83
HDAC6-216ENST00000468949 IQCA1LA6NCM1 817 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 WTIPA6NIX2 430 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-216ENST00000468949 GOLIM4O00461 696 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 EIF6P56537 245 aaKnown RBP9.85□□□□□ -0.83
HDAC6-216ENST00000468949 RASGRF1Q13972 1273 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 PODNQ7Z5L7 613 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 FBXO33Q7Z6M2 555 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 TXNRD3Q86VQ6 643 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 SKAP1Q86WV1 359 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 WDR66Q8TBY9 1149 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 TBC1D22AQ8WUA7 517 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 L3MBTL3Q96JM7 780 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-216ENST00000468949 ZNF512BQ96KM6 892 aaPredicted RBP9.85□□□□□ -0.83
HDAC6-216ENST00000468949 HAUS7Q99871 368 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 FSD1Q9BTV5 496 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.85□□□□□ -0.833e-10■■■■□ 24.1
HDAC6-216ENST00000468949 OSBPL3Q9H4L5 887 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 RRAGCQ9HB90 399 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 SNRKQ9NRH2 765 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 PAG1Q9NWQ8 432 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 ADAMTSL1Q8N6G6 1762 aa9.85□□□□□ -0.83
HDAC6-216ENST00000468949 PDS5AQ29RF7 1337 aaKnown RBP9.84□□□□□ -0.83
HDAC6-216ENST00000468949 SALL3Q9BXA9 1300 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 MAP4K4O95819 1239 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-216ENST00000468949 IL1R1P14778 569 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 HSPA6P17066 643 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 MCAMP43121 646 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 ZAP70P43403 619 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 FSTL1Q12841 308 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 SPTY2D1Q68D10 685 aaPredicted RBP9.84□□□□□ -0.83
HDAC6-216ENST00000468949 ZSCAN25Q6NSZ9 544 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 DZIP1Q86YF9 867 aaKnown RBP9.84□□□□□ -0.83
HDAC6-216ENST00000468949 SMC1BQ8NDV3 1235 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 PI4K2BQ8TCG2 481 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 EVI5LQ96CN4 794 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 LRP2BPQ9P2M1 347 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 ABCF2Q9UG63 623 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 ZNRF3Q9ULT6 936 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 JAG2Q9Y219 1238 aa9.84□□□□□ -0.83
HDAC6-216ENST00000468949 USP17L3A6NCW0 530 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 USP17L4A6NCW7 530 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 FZD9O00144 591 aa9.83□□□□□ -0.84
HDAC6-216ENST00000468949 IDH1O75874 414 aaKnown RBP9.83□□□□□ -0.84
HDAC6-216ENST00000468949 DDNO94850 711 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms