RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TTLL5Q6EMB2 1281 aa13.64□□□□□ -0.23
MSH5-212ENST00000467319 USP50Q70EL3 339 aaPredicted RBP13.64□□□□□ -0.23
MSH5-212ENST00000467319 PNMA8AQ86V59 439 aaPredicted RBP13.64□□□□□ -0.23
MSH5-212ENST00000467319 LDHDQ86WU2 507 aa13.64□□□□□ -0.23
MSH5-212ENST00000467319 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
MSH5-212ENST00000467319 CNOT7Q9UIV1 285 aaKnown RBP13.64□□□□□ -0.23
MSH5-212ENST00000467319 SEMA3EO15041 775 aa13.63□□□□□ -0.23
MSH5-212ENST00000467319 EGFRP00533 1210 aa13.63□□□□□ -0.23
MSH5-212ENST00000467319 TIMM10P62072 90 aa13.63□□□□□ -0.23
MSH5-212ENST00000467319 RASGRF1Q13972 1273 aa13.63□□□□□ -0.23
MSH5-212ENST00000467319 CCDC102BQ68D86 513 aa13.63□□□□□ -0.23
MSH5-212ENST00000467319 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
MSH5-212ENST00000467319 RHPN1Q8TCX5 695 aa13.63□□□□□ -0.23
MSH5-212ENST00000467319 IQSEC3Q9UPP2 1182 aaPredicted RBP13.63□□□□□ -0.23
MSH5-212ENST00000467319 MAST2Q6P0Q8 1798 aa13.63□□□□□ -0.23
MSH5-212ENST00000467319 AKAP11Q9UKA4 1901 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 RAB11FIP3O75154 756 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 USP17L8P0C7I0 530 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 ARID4AP29374 1257 aaPredicted RBP13.62□□□□□ -0.23
MSH5-212ENST00000467319 MMP14P50281 582 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 HIRAP54198 1017 aaPredicted RBP13.62□□□□□ -0.23
MSH5-212ENST00000467319 C16orf71Q8IYS4 520 aaPredicted RBP13.62□□□□□ -0.23
MSH5-212ENST00000467319 EXOC6Q8TAG9 804 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 FBXW7Q969H0 707 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 EAF2Q96CJ1 260 aaPredicted RBP13.62□□□□□ -0.23
MSH5-212ENST00000467319 KIF1BPQ96EK5 621 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 TLR7Q9NYK1 1049 aaKnown RBP13.62□□□□□ -0.23
MSH5-212ENST00000467319 DBNLQ9UJU6 430 aaKnown RBP13.62□□□□□ -0.23
MSH5-212ENST00000467319 JAG2Q9Y219 1238 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 ECM29Q5VYK3 1845 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 SALL1Q9NSC2 1324 aa13.62□□□□□ -0.23
MSH5-212ENST00000467319 FSTL1Q12841 308 aa13.61□□□□□ -0.23
MSH5-212ENST00000467319 KIF4BQ2VIQ3 1234 aa13.61□□□□□ -0.23
MSH5-212ENST00000467319 MFSD14BQ5SR56 506 aa13.61□□□□□ -0.23
MSH5-212ENST00000467319 SMC1BQ8NDV3 1235 aa13.61□□□□□ -0.23
MSH5-212ENST00000467319 TBC1D22AQ8WUA7 517 aa13.61□□□□□ -0.23
MSH5-212ENST00000467319 ZBED3Q96IU2 234 aaPredicted RBP13.61□□□□□ -0.23
MSH5-212ENST00000467319 DBNDD2Q9BQY9 259 aa13.61□□□□□ -0.23
MSH5-212ENST00000467319 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
MSH5-212ENST00000467319 PGAP2Q9UHJ9 254 aa13.61□□□□□ -0.23
MSH5-212ENST00000467319 H7C1D1 291 aa13.6□□□□□ -0.23
MSH5-212ENST00000467319 C1QTNF8P60827 252 aa13.6□□□□□ -0.23
MSH5-212ENST00000467319 HDAC1Q13547 482 aaPredicted RBP13.6□□□□□ -0.23
MSH5-212ENST00000467319 GRIK5Q16478 980 aa13.6□□□□□ -0.23
MSH5-212ENST00000467319 TBC1D10BQ4KMP7 808 aaPredicted RBP13.6□□□□□ -0.23
MSH5-212ENST00000467319 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
MSH5-212ENST00000467319 CHADLQ6NUI6 762 aa13.6□□□□□ -0.23
MSH5-212ENST00000467319 SAMD7Q7Z3H4 446 aa13.6□□□□□ -0.23
MSH5-212ENST00000467319 KIAA0825Q8IV33 1275 aa13.6□□□□□ -0.23
MSH5-212ENST00000467319 ZNF512BQ96KM6 892 aaPredicted RBP13.6□□□□□ -0.23
MSH5-212ENST00000467319 MYOZ2Q9NPC6 264 aa13.6□□□□□ -0.23
MSH5-212ENST00000467319 GNL3LQ9NVN8 582 aaKnown RBP13.6□□□□□ -0.23
MSH5-212ENST00000467319 CHAF1AQ13111 956 aaPredicted RBP13.59□□□□□ -0.23
MSH5-212ENST00000467319 SCARF1Q14162 830 aa13.59□□□□□ -0.23
MSH5-212ENST00000467319 MTMR14Q8NCE2 650 aa13.59□□□□□ -0.23
MSH5-212ENST00000467319 WDR66Q8TBY9 1149 aa13.59□□□□□ -0.23
MSH5-212ENST00000467319 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
MSH5-212ENST00000467319 NEUROD6Q96NK8 337 aa13.59□□□□□ -0.23
MSH5-212ENST00000467319 IL1RAPL2Q9NP60 686 aa13.59□□□□□ -0.23
MSH5-212ENST00000467319 DENND2AQ9ULE3 1009 aa13.59□□□□□ -0.23
MSH5-212ENST00000467319 SUGT1Q9Y2Z0 365 aa13.59□□□□□ -0.23
MSH5-212ENST00000467319 DOCK2Q92608 1830 aa13.58□□□□□ -0.24
MSH5-212ENST00000467319 FRAT2O75474 233 aaPredicted RBP13.58□□□□□ -0.24
MSH5-212ENST00000467319 MCAMP43121 646 aa13.58□□□□□ -0.24
MSH5-212ENST00000467319 AACSQ86V21 672 aa13.58□□□□□ -0.24
MSH5-212ENST00000467319 OGFOD1Q8N543 542 aa13.58□□□□□ -0.24
MSH5-212ENST00000467319 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
MSH5-212ENST00000467319 HMG20BQ9P0W2 317 aa13.58□□□□□ -0.24
MSH5-212ENST00000467319 PASKQ96RG2 1323 aa13.58□□□□□ -0.24
MSH5-212ENST00000467319 CEP350Q5VT06 3117 aa13.57□□□□□ -0.24
MSH5-212ENST00000467319 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
MSH5-212ENST00000467319 UQCRFS1P1P0C7P4 283 aa13.57□□□□□ -0.24
MSH5-212ENST00000467319 GORABQ5T7V8 394 aa13.57□□□□□ -0.24
MSH5-212ENST00000467319 PI16Q6UXB8 463 aa13.57□□□□□ -0.24
MSH5-212ENST00000467319 CLASRPQ8N2M8 674 aaKnown RBP13.57□□□□□ -0.24
MSH5-212ENST00000467319 CCDC8Q9H0W5 538 aaPredicted RBP13.57□□□□□ -0.24
MSH5-212ENST00000467319 SERPINA10Q9UK55 444 aa13.57□□□□□ -0.24
MSH5-212ENST00000467319 ASTN2O75129 1339 aaPredicted RBP13.57□□□□□ -0.24
MSH5-212ENST00000467319 PITPNM2Q9BZ72 1349 aa13.57□□□□□ -0.24
MSH5-212ENST00000467319 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 APBB1O00213 710 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 WNT10BO00744 389 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 PRDX5P30044 214 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 IRX6P78412 446 aaPredicted RBP13.56□□□□□ -0.24
MSH5-212ENST00000467319 HDLBPQ00341 1268 aaKnown RBP13.56□□□□□ -0.24
MSH5-212ENST00000467319 MAP1SQ66K74 1059 aaPredicted RBP13.56□□□□□ -0.24
MSH5-212ENST00000467319 SPATA5Q8NB90 893 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 GGA3Q9NZ52 723 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 HDAC9Q9UKV0 1011 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 TTF2Q9UNY4 1162 aaKnown RBP13.56□□□□□ -0.24
MSH5-212ENST00000467319 MAST3O60307 1309 aa13.56□□□□□ -0.24
MSH5-212ENST00000467319 F8W031 263 aaPredicted RBP13.55□□□□□ -0.24
MSH5-212ENST00000467319 NBPF9Q3BBW0 867 aa13.55□□□□□ -0.24
MSH5-212ENST00000467319 CCDC158Q5M9N0 1113 aa13.55□□□□□ -0.24
MSH5-212ENST00000467319 TTC39AQ5SRH9 613 aa13.55□□□□□ -0.24
MSH5-212ENST00000467319 PCDHAC2Q9Y5I4 1007 aa13.55□□□□□ -0.24
MSH5-212ENST00000467319 AOX1Q06278 1338 aa13.55□□□□□ -0.24
MSH5-212ENST00000467319 TRPM7Q96QT4 1865 aa13.55□□□□□ -0.24
MSH5-212ENST00000467319 SMARCA5O60264 1052 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms