RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ZBED3Q96IU2 234 aaPredicted RBP24.21■■□□□ 1.47
COL9A3-206ENST00000466532 DGKZQ13574 1117 aa24.2■■□□□ 1.46
COL9A3-206ENST00000466532 REM2Q8IYK8 340 aaPredicted RBP24.2■■□□□ 1.46
COL9A3-206ENST00000466532 MRPL50Q8N5N7 158 aaKnown RBP24.2■■□□□ 1.46
COL9A3-206ENST00000466532 NBPF7P0C2Y1 421 aaPredicted RBP24.19■■□□□ 1.46
COL9A3-206ENST00000466532 DLGAP5Q15398 846 aa24.19■■□□□ 1.46
COL9A3-206ENST00000466532 KAZALD1Q96I82 304 aa24.19■■□□□ 1.46
COL9A3-206ENST00000466532 COL1A1P02452 1464 aaPredicted RBP24.19■■□□□ 1.46
COL9A3-206ENST00000466532 F8W031 263 aaPredicted RBP24.18■■□□□ 1.46
COL9A3-206ENST00000466532 JAG2Q9Y219 1238 aa24.18■■□□□ 1.46
COL9A3-206ENST00000466532 UTYO14607 1347 aa24.17■■□□□ 1.46
COL9A3-206ENST00000466532 E9PSI1 815 aa24.17■■□□□ 1.46
COL9A3-206ENST00000466532 FKBP1AP62942 108 aaKnown RBP24.17■■□□□ 1.46
COL9A3-206ENST00000466532 MYH13Q9UKX3 1938 aa24.16■■□□□ 1.46
COL9A3-206ENST00000466532 PRKG1Q13976 671 aa24.16■■□□□ 1.46
COL9A3-206ENST00000466532 MTMR14Q8NCE2 650 aa24.16■■□□□ 1.46
COL9A3-206ENST00000466532 PUS3Q9BZE2 481 aaKnown RBP24.16■■□□□ 1.46
COL9A3-206ENST00000466532 PTPRCP08575 1304 aa24.15■■□□□ 1.46
COL9A3-206ENST00000466532 UBE4AQ14139 1066 aa24.15■■□□□ 1.46
COL9A3-206ENST00000466532 CFAP100Q494V2 611 aa24.15■■□□□ 1.46
COL9A3-206ENST00000466532 ARMC9Q7Z3E5 817 aa24.15■■□□□ 1.46
COL9A3-206ENST00000466532 BICC1Q9H694 974 aaKnown RBP24.15■■□□□ 1.46
COL9A3-206ENST00000466532 PCDHAC2Q9Y5I4 1007 aa24.15■■□□□ 1.46
COL9A3-206ENST00000466532 LAMB1P07942 1786 aa24.14■■□□□ 1.46
COL9A3-206ENST00000466532 DEFB129Q9H1M3 183 aa24.14■■□□□ 1.45
COL9A3-206ENST00000466532 FAM205AQ6ZU69 1335 aa24.13■■□□□ 1.45
COL9A3-206ENST00000466532 MYO1BO43795 1136 aa24.13■■□□□ 1.45
COL9A3-206ENST00000466532 GYG1P46976 350 aa24.13■■□□□ 1.45
COL9A3-206ENST00000466532 RABL6Q3YEC7 729 aaPredicted RBP24.13■■□□□ 1.45
COL9A3-206ENST00000466532 SSH1Q8WYL5 1049 aa24.13■■□□□ 1.45
COL9A3-206ENST00000466532 ANGEL1Q9UNK9 670 aaKnown RBP24.13■■□□□ 1.45
COL9A3-206ENST00000466532 MROH5Q6ZUA9 1318 aa24.12■■□□□ 1.45
COL9A3-206ENST00000466532 SPDYE2BA6NHP3 402 aa24.12■■□□□ 1.45
COL9A3-206ENST00000466532 SPDYE6P0CI01 402 aa24.12■■□□□ 1.45
COL9A3-206ENST00000466532 HIBADHP31937 336 aaKnown RBP24.12■■□□□ 1.45
COL9A3-206ENST00000466532 PTPN12Q05209 780 aaKnown RBP24.12■■□□□ 1.45
COL9A3-206ENST00000466532 SLFN5Q08AF3 891 aa24.12■■□□□ 1.45
COL9A3-206ENST00000466532 TDRD7Q8NHU6 1098 aaKnown RBP24.12■■□□□ 1.45
COL9A3-206ENST00000466532 PRMT6Q96LA8 375 aaPredicted RBP24.12■■□□□ 1.45
COL9A3-206ENST00000466532 RIPOR2Q9Y4F9 1068 aa24.12■■□□□ 1.45
COL9A3-206ENST00000466532 CLRN2A0PK11 232 aa24.11■■□□□ 1.45
COL9A3-206ENST00000466532 RBM5P52756 815 aaKnown RBP eCLIP24.11■■□□□ 1.45
COL9A3-206ENST00000466532 MKRN3Q13064 507 aaKnown RBP24.11■■□□□ 1.45
COL9A3-206ENST00000466532 ANKRD44Q8N8A2 993 aa24.11■■□□□ 1.45
COL9A3-206ENST00000466532 FAM84BQ96KN1 310 aaPredicted RBP24.11■■□□□ 1.45
COL9A3-206ENST00000466532 FZD1Q9UP38 647 aa24.11■■□□□ 1.45
COL9A3-206ENST00000466532 PPP2R3BQ9Y5P8 575 aa24.11■■□□□ 1.45
COL9A3-206ENST00000466532 OTOFQ9HC10 1997 aa24.11■■□□□ 1.45
COL9A3-206ENST00000466532 MFSD14BQ5SR56 506 aa24.1■■□□□ 1.45
COL9A3-206ENST00000466532 VEZTQ9HBM0 779 aa24.1■■□□□ 1.45
COL9A3-206ENST00000466532 SSC5DA1L4H1 1573 aa24.1■■□□□ 1.45
COL9A3-206ENST00000466532 LDLRAD1Q5T700 205 aa24.09■■□□□ 1.45
COL9A3-206ENST00000466532 AOX1Q06278 1338 aa24.09■■□□□ 1.45
COL9A3-206ENST00000466532 TM4SF4P48230 202 aa24.08■■□□□ 1.45
COL9A3-206ENST00000466532 LRRC24Q50LG9 513 aa24.08■■□□□ 1.45
COL9A3-206ENST00000466532 METTL24Q5JXM2 366 aa24.08■■□□□ 1.45
COL9A3-206ENST00000466532 TTF2Q9UNY4 1162 aaKnown RBP24.08■■□□□ 1.45
COL9A3-206ENST00000466532 TBC1D8O95759 1140 aa24.07■■□□□ 1.44
COL9A3-206ENST00000466532 SREBF2Q12772 1141 aa24.07■■□□□ 1.44
COL9A3-206ENST00000466532 ALDH1L2Q3SY69 923 aa24.07■■□□□ 1.44
COL9A3-206ENST00000466532 CDCA7LQ96GN5 454 aa24.07■■□□□ 1.44
COL9A3-206ENST00000466532 USP44Q9H0E7 712 aa24.07■■□□□ 1.44
COL9A3-206ENST00000466532 PPP1R12BO60237 982 aaPredicted RBP24.06■■□□□ 1.44
COL9A3-206ENST00000466532 RGS19P49795 217 aa24.06■■□□□ 1.44
COL9A3-206ENST00000466532 MAP3K11Q16584 847 aa24.06■■□□□ 1.44
COL9A3-206ENST00000466532 SUPT20HL1Q3ZLR7 823 aa24.06■■□□□ 1.44
COL9A3-206ENST00000466532 VPS37DQ86XT2 251 aa24.06■■□□□ 1.44
COL9A3-206ENST00000466532 KLHDC4Q8TBB5 520 aa24.06■■□□□ 1.44
COL9A3-206ENST00000466532 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.06■■□□□ 1.44
COL9A3-206ENST00000466532 PDE8BO95263 885 aa24.05■■□□□ 1.44
COL9A3-206ENST00000466532 MLLT1Q03111 559 aaPredicted RBP24.05■■□□□ 1.44
COL9A3-206ENST00000466532 SPRYD7Q5W111 196 aa24.05■■□□□ 1.44
COL9A3-206ENST00000466532 CTU1Q7Z7A3 348 aaKnown RBP24.05■■□□□ 1.44
COL9A3-206ENST00000466532 SMC4Q9NTJ3 1288 aa24.05■■□□□ 1.44
COL9A3-206ENST00000466532 SERPINA10Q9UK55 444 aa24.05■■□□□ 1.44
COL9A3-206ENST00000466532 IQSEC3Q9UPP2 1182 aaPredicted RBP24.05■■□□□ 1.44
COL9A3-206ENST00000466532 CAVIN4Q5BKX8 364 aa24.04■■□□□ 1.44
COL9A3-206ENST00000466532 NBPF12Q5TAG4 269 aaPredicted RBP24.04■■□□□ 1.44
COL9A3-206ENST00000466532 FBXO33Q7Z6M2 555 aa24.04■■□□□ 1.44
COL9A3-206ENST00000466532 VGLL2Q8N8G2 317 aa24.04■■□□□ 1.44
COL9A3-206ENST00000466532 SLC10A4Q96EP9 437 aa24.04■■□□□ 1.44
COL9A3-206ENST00000466532 FRAT2O75474 233 aaPredicted RBP24.03■■□□□ 1.44
COL9A3-206ENST00000466532 CHAF1AQ13111 956 aaPredicted RBP24.03■■□□□ 1.44
COL9A3-206ENST00000466532 RASA3Q14644 834 aa24.03■■□□□ 1.44
COL9A3-206ENST00000466532 SPDYE2Q495Y8 402 aa24.03■■□□□ 1.44
COL9A3-206ENST00000466532 ZNF296Q8WUU4 475 aaPredicted RBP24.03■■□□□ 1.44
COL9A3-206ENST00000466532 TDRD3Q9H7E2 651 aaKnown RBP24.03■■□□□ 1.44
COL9A3-206ENST00000466532 ZNF70Q9UC06 446 aaPredicted RBP24.03■■□□□ 1.44
COL9A3-206ENST00000466532 TNFAIP1Q13829 316 aa24.02■■□□□ 1.44
COL9A3-206ENST00000466532 CLMNQ96JQ2 1002 aa24.02■■□□□ 1.44
COL9A3-206ENST00000466532 CRKP46108 304 aa24.01■■□□□ 1.43
COL9A3-206ENST00000466532 DZIP1LQ8IYY4 767 aaKnown RBP24.01■■□□□ 1.43
COL9A3-206ENST00000466532 TRMT2AQ8IZ69 625 aaKnown RBP24.01■■□□□ 1.43
COL9A3-206ENST00000466532 MANSC4A6NHS7 340 aaPredicted RBP24■■□□□ 1.43
COL9A3-206ENST00000466532 UNCXA6NJT0 531 aa24■■□□□ 1.43
COL9A3-206ENST00000466532 ZBTB48P10074 688 aaPredicted RBP24■■□□□ 1.43
COL9A3-206ENST00000466532 IREB2P48200 963 aaKnown RBP24■■□□□ 1.43
COL9A3-206ENST00000466532 GRIK5Q16478 980 aa24■■□□□ 1.43
COL9A3-206ENST00000466532 TBC1D22AQ8WUA7 517 aa24■■□□□ 1.43
COL9A3-206ENST00000466532 WNK4Q96J92 1243 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms