RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 R3HDMLQ9H3Y0 253 aa9.07□□□□□ -0.96
RPUSD3-212ENST00000466141 POLLQ9UGP5 575 aa9.07□□□□□ -0.96
RPUSD3-212ENST00000466141 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
RPUSD3-212ENST00000466141 PAPPA2Q9BXP8 1791 aa9.07□□□□□ -0.96
RPUSD3-212ENST00000466141 SCN9AQ15858 1988 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 MYH3P11055 1940 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 POTEFA5A3E0 1075 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 UBE2Q2LH0YL09 131 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 GPR25O00155 361 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 EIF2S2P20042 333 aaKnown RBP9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 RPS12P25398 132 aaKnown RBP9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 PRAMEF18Q5VWM3 479 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 DUSP27Q5VZP5 1158 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 FBXO46Q6PJ61 603 aaPredicted RBP9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 NBPF11Q86T75 865 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 WDR63Q8IWG1 891 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 CELF1Q92879 486 aaKnown RBP9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 CHPF2Q9P2E5 772 aa9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 TRMT112Q9UI30 125 aaKnown RBP9.06□□□□□ -0.96
RPUSD3-212ENST00000466141 FXR1P51114 621 aaKnown RBP eCLIP9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 AIMP1Q12904 312 aaKnown RBP9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 SCARF1Q14162 830 aa9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 CASC1Q6TDU7 716 aa9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 TSPYL6Q8N831 410 aa9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 C8orf58Q8NAV2 365 aa9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 SPINK5Q9NQ38 1064 aaPredicted RBP9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 CIZ1Q9ULV3 898 aaPredicted RBP9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 SH3TC1Q8TE82 1336 aa9.05□□□□□ -0.96
RPUSD3-212ENST00000466141 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
RPUSD3-212ENST00000466141 ANKRD13AQ8IZ07 590 aa9.04□□□□□ -0.96
RPUSD3-212ENST00000466141 XAGE3Q8WTP9 111 aa9.04□□□□□ -0.96
RPUSD3-212ENST00000466141 ZNF830Q96NB3 372 aaPredicted RBP9.04□□□□□ -0.96
RPUSD3-212ENST00000466141 DLL1O00548 723 aa9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 FKTNO75072 461 aa9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 VIL1P09327 827 aaKnown RBP9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 ZNF280AP59817 542 aaPredicted RBP9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 FKBP1BP68106 108 aa9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 COPS6Q7L5N1 327 aa9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 TMC4Q7Z404 712 aa9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 TBC1D16Q8TBP0 767 aa9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 DBF4Q9UBU7 674 aaPredicted RBP9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 MKI67P46013 3256 aaKnown RBP9.03□□□□□ -0.96
RPUSD3-212ENST00000466141 TM4SF4P48230 202 aa9.02□□□□□ -0.97
RPUSD3-212ENST00000466141 TCIRG1Q13488 830 aa9.02□□□□□ -0.97
RPUSD3-212ENST00000466141 TTLL12Q14166 644 aaPredicted RBP9.02□□□□□ -0.97
RPUSD3-212ENST00000466141 FAM89AQ96GI7 184 aa9.02□□□□□ -0.97
RPUSD3-212ENST00000466141 EYA3Q99504 573 aa9.02□□□□□ -0.97
RPUSD3-212ENST00000466141 ELL2O00472 640 aaPredicted RBP9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 UFL1O94874 794 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 EN2P19622 333 aaPredicted RBP9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 PRKG1Q13976 671 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 TWISTNBQ3B726 338 aaPredicted RBP9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 NBPF9Q3BBW0 867 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 HSP90AB3PQ58FF7 597 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 RSBN1LQ6PCB5 846 aaPredicted RBP9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 PDCL3Q9H2J4 239 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 MYH16Q9H6N6 1097 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 MYOZ2Q9NPC6 264 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 HYPKQ9NX55 129 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 FZD1Q9UP38 647 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 COLQQ9Y215 455 aaPredicted RBP9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 TRIM17Q9Y577 477 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 HTTP42858 3142 aa9.01□□□□□ -0.97
RPUSD3-212ENST00000466141 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 G3V3G9 751 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 USP17L8P0C7I0 530 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 RGS3P49796 1198 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 PTPN12Q05209 780 aaKnown RBP9□□□□□ -0.97
RPUSD3-212ENST00000466141 EXOSC9Q06265 439 aaKnown RBP9□□□□□ -0.97
RPUSD3-212ENST00000466141 SF3B3Q15393 1217 aaKnown RBP9□□□□□ -0.97
RPUSD3-212ENST00000466141 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
RPUSD3-212ENST00000466141 DCAF8Q5TAQ9 597 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 CCDC30Q5VVM6 783 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 SPTY2D1Q68D10 685 aaPredicted RBP9□□□□□ -0.97
RPUSD3-212ENST00000466141 OTOP1Q7RTM1 612 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 GMLQ99445 158 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 MXD3Q9BW11 206 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 ZC3H12CQ9C0D7 883 aaKnown RBP9□□□□□ -0.97
RPUSD3-212ENST00000466141 SEC31BQ9NQW1 1179 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 TMEM51Q9NW97 253 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 SPEF2Q9C093 1822 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 CUL9Q8IWT3 2517 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 PITPNM2Q9BZ72 1349 aa9□□□□□ -0.97
RPUSD3-212ENST00000466141 ZNF609O15014 1411 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 WTIPA6NIX2 430 aaPredicted RBP8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 VAMP4O75379 141 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 PSEN1P49768 467 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 RPS8P62241 208 aaKnown RBP8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 CAP1Q01518 475 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 SREBF2Q12772 1141 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 TAF3Q5VWG9 929 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 AGBL3Q8NEM8 1001 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 PLBD2Q8NHP8 589 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 SPATA32Q96LK8 384 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 ANKIB1Q9P2G1 1089 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 NOP58Q9Y2X3 529 aaKnown RBP8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 A0A1B0GUL6 1792 aa8.99□□□□□ -0.97
RPUSD3-212ENST00000466141 PSME4Q14997 1843 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms