RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 ECE1P42892 770 aa27.28■■□□□ 1.96
LIME1-203ENST00000465591 GBA2Q9HCG7 927 aaPredicted RBP27.28■■□□□ 1.96
LIME1-203ENST00000465591 PCDHAC2Q9Y5I4 1007 aa27.28■■□□□ 1.96
LIME1-203ENST00000465591 PDE8BO95263 885 aa27.27■■□□□ 1.96
LIME1-203ENST00000465591 HIBADHP31937 336 aaKnown RBP27.27■■□□□ 1.96
LIME1-203ENST00000465591 HHIPL1Q96JK4 782 aa27.27■■□□□ 1.96
LIME1-203ENST00000465591 FAM205AQ6ZU69 1335 aa27.26■■□□□ 1.95
LIME1-203ENST00000465591 F8W031 263 aaPredicted RBP27.26■■□□□ 1.95
LIME1-203ENST00000465591 EYA2O00167 538 aa27.26■■□□□ 1.95
LIME1-203ENST00000465591 HUNKP57058 714 aa27.26■■□□□ 1.95
LIME1-203ENST00000465591 ATG9AQ7Z3C6 839 aa27.26■■□□□ 1.95
LIME1-203ENST00000465591 FRAT1Q92837 279 aaPredicted RBP27.26■■□□□ 1.95
LIME1-203ENST00000465591 HDAC9Q9UKV0 1011 aa27.26■■□□□ 1.95
LIME1-203ENST00000465591 ARAP2Q8WZ64 1704 aa27.25■■□□□ 1.95
LIME1-203ENST00000465591 FKBP1AP62942 108 aaKnown RBP27.25■■□□□ 1.95
LIME1-203ENST00000465591 PRAMEF18Q5VWM3 479 aa27.25■■□□□ 1.95
LIME1-203ENST00000465591 ATF7IPQ6VMQ6 1270 aa27.25■■□□□ 1.95
LIME1-203ENST00000465591 FBXO33Q7Z6M2 555 aa27.25■■□□□ 1.95
LIME1-203ENST00000465591 ECM29Q5VYK3 1845 aa27.25■■□□□ 1.95
LIME1-203ENST00000465591 FGFR2P21802 821 aa27.24■■□□□ 1.95
LIME1-203ENST00000465591 MMP14P50281 582 aa27.24■■□□□ 1.95
LIME1-203ENST00000465591 IQSEC3Q9UPP2 1182 aaPredicted RBP27.24■■□□□ 1.95
LIME1-203ENST00000465591 AOX1Q06278 1338 aa27.23■■□□□ 1.95
LIME1-203ENST00000465591 ZBED9Q6R2W3 1325 aa27.23■■□□□ 1.95
LIME1-203ENST00000465591 C2orf69Q8N8R5 385 aa27.23■■□□□ 1.95
LIME1-203ENST00000465591 CLUAP1Q96AJ1 413 aa27.23■■□□□ 1.95
LIME1-203ENST00000465591 SIL1Q9H173 461 aa27.23■■□□□ 1.95
LIME1-203ENST00000465591 IPO8O15397 1037 aaKnown RBP27.22■■□□□ 1.95
LIME1-203ENST00000465591 ZIC5Q96T25 663 aa27.22■■□□□ 1.95
LIME1-203ENST00000465591 PA2G4Q9UQ80 394 aaKnown RBP27.22■■□□□ 1.95
LIME1-203ENST00000465591 BCAMP50895 628 aa27.21■■□□□ 1.95
LIME1-203ENST00000465591 MAP2K1Q02750 393 aaPredicted RBP27.21■■□□□ 1.95
LIME1-203ENST00000465591 MFSD14BQ5SR56 506 aa27.21■■□□□ 1.95
LIME1-203ENST00000465591 IFFO2Q5TF58 517 aa27.21■■□□□ 1.95
LIME1-203ENST00000465591 MTMR14Q8NCE2 650 aa27.21■■□□□ 1.95
LIME1-203ENST00000465591 AIDAQ96BJ3 306 aa27.21■■□□□ 1.95
LIME1-203ENST00000465591 PAPPA2Q9BXP8 1791 aa27.2■■□□□ 1.95
LIME1-203ENST00000465591 PUM3Q15397 648 aaKnown RBP27.2■■□□□ 1.94
LIME1-203ENST00000465591 DLGAP5Q15398 846 aa27.2■■□□□ 1.94
LIME1-203ENST00000465591 GRIK5Q16478 980 aa27.2■■□□□ 1.94
LIME1-203ENST00000465591 CFAP100Q494V2 611 aa27.2■■□□□ 1.94
LIME1-203ENST00000465591 MOB2Q70IA6 237 aa27.2■■□□□ 1.94
LIME1-203ENST00000465591 FAM155AB1AL88 458 aaPredicted RBP27.19■■□□□ 1.94
LIME1-203ENST00000465591 MAP2K2P36507 400 aa27.19■■□□□ 1.94
LIME1-203ENST00000465591 RGMBQ6NW40 437 aa27.19■■□□□ 1.94
LIME1-203ENST00000465591 MYH13Q9UKX3 1938 aa27.18■■□□□ 1.94
LIME1-203ENST00000465591 GNAI3P08754 354 aa27.18■■□□□ 1.94
LIME1-203ENST00000465591 VPS37DQ86XT2 251 aa27.18■■□□□ 1.94
LIME1-203ENST00000465591 PRMT6Q96LA8 375 aaPredicted RBP27.18■■□□□ 1.94
LIME1-203ENST00000465591 SPDYE2BA6NHP3 402 aa27.17■■□□□ 1.94
LIME1-203ENST00000465591 CIAO1O76071 339 aa27.17■■□□□ 1.94
LIME1-203ENST00000465591 SPDYE6P0CI01 402 aa27.17■■□□□ 1.94
LIME1-203ENST00000465591 CTCFP49711 727 aaPredicted RBP27.17■■□□□ 1.94
LIME1-203ENST00000465591 CHAF1AQ13111 956 aaPredicted RBP27.17■■□□□ 1.94
LIME1-203ENST00000465591 CAVIN4Q5BKX8 364 aa27.17■■□□□ 1.94
LIME1-203ENST00000465591 ZKSCAN2Q63HK3 967 aa27.17■■□□□ 1.94
LIME1-203ENST00000465591 TMEM57Q8N5G2 664 aa27.17■■□□□ 1.94
LIME1-203ENST00000465591 HDAC5Q9UQL6 1122 aa27.17■■□□□ 1.94
LIME1-203ENST00000465591 IFIT1P09914 478 aaKnown RBP27.16■■□□□ 1.94
LIME1-203ENST00000465591 HSPA8P11142 646 aaKnown RBP27.16■■□□□ 1.94
LIME1-203ENST00000465591 APOBEC3FQ8IUX4 373 aaKnown RBP27.16■■□□□ 1.94
LIME1-203ENST00000465591 COPRSQ9NQ92 184 aa27.16■■□□□ 1.94
LIME1-203ENST00000465591 FBXO3Q9UK99 471 aa27.16■■□□□ 1.94
LIME1-203ENST00000465591 TTF2Q9UNY4 1162 aaKnown RBP27.16■■□□□ 1.94
LIME1-203ENST00000465591 CLRN2A0PK11 232 aa27.15■■□□□ 1.94
LIME1-203ENST00000465591 LBX1P52954 281 aa27.15■■□□□ 1.94
LIME1-203ENST00000465591 LPIN2Q92539 896 aa27.15■■□□□ 1.94
LIME1-203ENST00000465591 SLC5A1P13866 664 aa27.14■■□□□ 1.94
LIME1-203ENST00000465591 ZNF157P51786 506 aaPredicted RBP27.14■■□□□ 1.94
LIME1-203ENST00000465591 MTX1Q13505 466 aa27.14■■□□□ 1.94
LIME1-203ENST00000465591 COL1A1P02452 1464 aaPredicted RBP27.13■■□□□ 1.93
LIME1-203ENST00000465591 FKBP1BP68106 108 aa27.13■■□□□ 1.93
LIME1-203ENST00000465591 NOGQ13253 232 aa27.13■■□□□ 1.93
LIME1-203ENST00000465591 CEP126Q9P2H0 1117 aa27.13■■□□□ 1.93
LIME1-203ENST00000465591 UBE2Q2LH0YL09 131 aa27.12■■□□□ 1.93
LIME1-203ENST00000465591 SRGAP3O43295 1099 aa27.12■■□□□ 1.93
LIME1-203ENST00000465591 FRAT2O75474 233 aaPredicted RBP27.12■■□□□ 1.93
LIME1-203ENST00000465591 IL15P40933 162 aaPredicted RBP27.12■■□□□ 1.93
LIME1-203ENST00000465591 RBM5P52756 815 aaKnown RBP eCLIP27.12■■□□□ 1.93
LIME1-203ENST00000465591 ATP2B3Q16720 1220 aa27.12■■□□□ 1.93
LIME1-203ENST00000465591 DEFB129Q9H1M3 183 aa27.12■■□□□ 1.93
LIME1-203ENST00000465591 PRDM10Q9NQV6 1147 aa27.12■■□□□ 1.93
LIME1-203ENST00000465591 TSKSQ9UJT2 592 aa27.12■■□□□ 1.93
LIME1-203ENST00000465591 SLC10A3P09131 477 aa27.11■■□□□ 1.93
LIME1-203ENST00000465591 RLBP1P12271 317 aa27.11■■□□□ 1.93
LIME1-203ENST00000465591 TNS4Q8IZW8 715 aa27.11■■□□□ 1.93
LIME1-203ENST00000465591 SERPINA10Q9UK55 444 aa27.11■■□□□ 1.93
LIME1-203ENST00000465591 SSC5DA1L4H1 1573 aa27.1■■□□□ 1.93
LIME1-203ENST00000465591 GNAI2P04899 355 aa27.1■■□□□ 1.93
LIME1-203ENST00000465591 RASAL3Q86YV0 1011 aa27.1■■□□□ 1.93
LIME1-203ENST00000465591 CCDC102AQ96A19 550 aa27.1■■□□□ 1.93
LIME1-203ENST00000465591 FZD1Q9UP38 647 aa27.1■■□□□ 1.93
LIME1-203ENST00000465591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.1■■□□□ 1.93
LIME1-203ENST00000465591 PNMA6EA0A0J9YXQ4 647 aa27.09■■□□□ 1.93
LIME1-203ENST00000465591 CRKP46108 304 aa27.09■■□□□ 1.93
LIME1-203ENST00000465591 TBC1D22AQ8WUA7 517 aa27.09■■□□□ 1.93
LIME1-203ENST00000465591 VEZTQ9HBM0 779 aa27.09■■□□□ 1.93
LIME1-203ENST00000465591 MYO1BO43795 1136 aa27.08■■□□□ 1.93
LIME1-203ENST00000465591 ADORA1P30542 326 aa27.08■■□□□ 1.93
LIME1-203ENST00000465591 KIF23Q02241 960 aaPredicted RBP27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms