RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 APOBEC3FQ8IUX4 373 aaKnown RBP26.35■■□□□ 1.81
CSPG5-204ENST00000465441 REM2Q8IYK8 340 aaPredicted RBP26.35■■□□□ 1.81
CSPG5-204ENST00000465441 PUS3Q9BZE2 481 aaKnown RBP26.35■■□□□ 1.81
CSPG5-204ENST00000465441 UTYO14607 1347 aa26.35■■□□□ 1.81
CSPG5-204ENST00000465441 E9PSI1 815 aa26.34■■□□□ 1.81
CSPG5-204ENST00000465441 F8W031 263 aaPredicted RBP26.34■■□□□ 1.81
CSPG5-204ENST00000465441 FKBP1AP62942 108 aaKnown RBP26.34■■□□□ 1.81
CSPG5-204ENST00000465441 DGKZQ13574 1117 aa26.34■■□□□ 1.81
CSPG5-204ENST00000465441 MTMR14Q8NCE2 650 aa26.34■■□□□ 1.81
CSPG5-204ENST00000465441 JAG2Q9Y219 1238 aa26.34■■□□□ 1.81
CSPG5-204ENST00000465441 PCDHAC2Q9Y5I4 1007 aa26.34■■□□□ 1.81
CSPG5-204ENST00000465441 UBE4AQ14139 1066 aa26.33■■□□□ 1.81
CSPG5-204ENST00000465441 SLFN5Q08AF3 891 aa26.32■■□□□ 1.8
CSPG5-204ENST00000465441 PRKG1Q13976 671 aa26.32■■□□□ 1.8
CSPG5-204ENST00000465441 SSH1Q8WYL5 1049 aa26.32■■□□□ 1.8
CSPG5-204ENST00000465441 RIPOR2Q9Y4F9 1068 aa26.32■■□□□ 1.8
CSPG5-204ENST00000465441 CFAP100Q494V2 611 aa26.31■■□□□ 1.8
CSPG5-204ENST00000465441 PRMT6Q96LA8 375 aaPredicted RBP26.31■■□□□ 1.8
CSPG5-204ENST00000465441 BICC1Q9H694 974 aaKnown RBP26.31■■□□□ 1.8
CSPG5-204ENST00000465441 A0A1B0GUL6 1792 aa26.3■■□□□ 1.8
CSPG5-204ENST00000465441 AKAP11Q9UKA4 1901 aa26.3■■□□□ 1.8
CSPG5-204ENST00000465441 GYG1P46976 350 aa26.3■■□□□ 1.8
CSPG5-204ENST00000465441 PTPN12Q05209 780 aaKnown RBP26.3■■□□□ 1.8
CSPG5-204ENST00000465441 RABL6Q3YEC7 729 aaPredicted RBP26.3■■□□□ 1.8
CSPG5-204ENST00000465441 ARMC9Q7Z3E5 817 aa26.3■■□□□ 1.8
CSPG5-204ENST00000465441 TDRD7Q8NHU6 1098 aaKnown RBP26.3■■□□□ 1.8
CSPG5-204ENST00000465441 FAM84BQ96KN1 310 aaPredicted RBP26.3■■□□□ 1.8
CSPG5-204ENST00000465441 DEFB129Q9H1M3 183 aa26.3■■□□□ 1.8
CSPG5-204ENST00000465441 HIBADHP31937 336 aaKnown RBP26.29■■□□□ 1.8
CSPG5-204ENST00000465441 PTPRCP08575 1304 aa26.29■■□□□ 1.8
CSPG5-204ENST00000465441 ANKRD44Q8N8A2 993 aa26.28■■□□□ 1.8
CSPG5-204ENST00000465441 FAM205AQ6ZU69 1335 aa26.28■■□□□ 1.8
CSPG5-204ENST00000465441 CLRN2A0PK11 232 aa26.27■■□□□ 1.8
CSPG5-204ENST00000465441 SPDYE2BA6NHP3 402 aa26.27■■□□□ 1.8
CSPG5-204ENST00000465441 SPDYE6P0CI01 402 aa26.27■■□□□ 1.8
CSPG5-204ENST00000465441 MKRN3Q13064 507 aaKnown RBP26.27■■□□□ 1.8
CSPG5-204ENST00000465441 LRRC24Q50LG9 513 aa26.27■■□□□ 1.8
CSPG5-204ENST00000465441 LDLRAD1Q5T700 205 aa26.27■■□□□ 1.8
CSPG5-204ENST00000465441 CDCA7LQ96GN5 454 aa26.27■■□□□ 1.8
CSPG5-204ENST00000465441 ANGEL1Q9UNK9 670 aaKnown RBP26.27■■□□□ 1.8
CSPG5-204ENST00000465441 FZD1Q9UP38 647 aa26.27■■□□□ 1.8
CSPG5-204ENST00000465441 MROH5Q6ZUA9 1318 aa26.26■■□□□ 1.79
CSPG5-204ENST00000465441 MYO1BO43795 1136 aa26.26■■□□□ 1.79
CSPG5-204ENST00000465441 TM4SF4P48230 202 aa26.26■■□□□ 1.79
CSPG5-204ENST00000465441 USP44Q9H0E7 712 aa26.26■■□□□ 1.79
CSPG5-204ENST00000465441 AOX1Q06278 1338 aa26.25■■□□□ 1.79
CSPG5-204ENST00000465441 RBM5P52756 815 aaKnown RBP eCLIP26.25■■□□□ 1.79
CSPG5-204ENST00000465441 RGS19P49795 217 aa26.24■■□□□ 1.79
CSPG5-204ENST00000465441 MFSD14BQ5SR56 506 aa26.24■■□□□ 1.79
CSPG5-204ENST00000465441 FBXO33Q7Z6M2 555 aa26.24■■□□□ 1.79
CSPG5-204ENST00000465441 VEZTQ9HBM0 779 aa26.24■■□□□ 1.79
CSPG5-204ENST00000465441 PPP2R3BQ9Y5P8 575 aa26.24■■□□□ 1.79
CSPG5-204ENST00000465441 TBC1D8O95759 1140 aa26.23■■□□□ 1.79
CSPG5-204ENST00000465441 ALDH1L2Q3SY69 923 aa26.23■■□□□ 1.79
CSPG5-204ENST00000465441 METTL24Q5JXM2 366 aa26.23■■□□□ 1.79
CSPG5-204ENST00000465441 KLHDC4Q8TBB5 520 aa26.23■■□□□ 1.79
CSPG5-204ENST00000465441 MAP3K11Q16584 847 aa26.22■■□□□ 1.79
CSPG5-204ENST00000465441 TRMT2AQ8IZ69 625 aaKnown RBP26.22■■□□□ 1.79
CSPG5-204ENST00000465441 TTF2Q9UNY4 1162 aaKnown RBP26.22■■□□□ 1.79
CSPG5-204ENST00000465441 COL1A1P02452 1464 aaPredicted RBP26.22■■□□□ 1.79
CSPG5-204ENST00000465441 PPP1R12BO60237 982 aaPredicted RBP26.21■■□□□ 1.79
CSPG5-204ENST00000465441 PDE8BO95263 885 aa26.21■■□□□ 1.79
CSPG5-204ENST00000465441 NBPF12Q5TAG4 269 aaPredicted RBP26.21■■□□□ 1.79
CSPG5-204ENST00000465441 SLC10A4Q96EP9 437 aa26.21■■□□□ 1.79
CSPG5-204ENST00000465441 SUPT20HL1Q3ZLR7 823 aa26.2■■□□□ 1.78
CSPG5-204ENST00000465441 SPRYD7Q5W111 196 aa26.2■■□□□ 1.78
CSPG5-204ENST00000465441 VPS37DQ86XT2 251 aa26.2■■□□□ 1.78
CSPG5-204ENST00000465441 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.2■■□□□ 1.78
CSPG5-204ENST00000465441 SERPINA10Q9UK55 444 aa26.2■■□□□ 1.78
CSPG5-204ENST00000465441 IQSEC3Q9UPP2 1182 aaPredicted RBP26.2■■□□□ 1.78
CSPG5-204ENST00000465441 RASA3Q14644 834 aa26.19■■□□□ 1.78
CSPG5-204ENST00000465441 VGLL2Q8N8G2 317 aa26.19■■□□□ 1.78
CSPG5-204ENST00000465441 TDRD3Q9H7E2 651 aaKnown RBP26.19■■□□□ 1.78
CSPG5-204ENST00000465441 SREBF2Q12772 1141 aa26.18■■□□□ 1.78
CSPG5-204ENST00000465441 GRIK5Q16478 980 aa26.18■■□□□ 1.78
CSPG5-204ENST00000465441 CAVIN4Q5BKX8 364 aa26.18■■□□□ 1.78
CSPG5-204ENST00000465441 CTU1Q7Z7A3 348 aaKnown RBP26.18■■□□□ 1.78
CSPG5-204ENST00000465441 SMC4Q9NTJ3 1288 aa26.18■■□□□ 1.78
CSPG5-204ENST00000465441 ZNF70Q9UC06 446 aaPredicted RBP26.18■■□□□ 1.78
CSPG5-204ENST00000465441 USP2O75604 605 aaPredicted RBP26.17■■□□□ 1.78
CSPG5-204ENST00000465441 MLLT1Q03111 559 aaPredicted RBP26.17■■□□□ 1.78
CSPG5-204ENST00000465441 CHAF1AQ13111 956 aaPredicted RBP26.17■■□□□ 1.78
CSPG5-204ENST00000465441 SPDYE2Q495Y8 402 aa26.17■■□□□ 1.78
CSPG5-204ENST00000465441 DZIP1LQ8IYY4 767 aaKnown RBP26.17■■□□□ 1.78
CSPG5-204ENST00000465441 ZNF296Q8WUU4 475 aaPredicted RBP26.17■■□□□ 1.78
CSPG5-204ENST00000465441 CLMNQ96JQ2 1002 aa26.17■■□□□ 1.78
CSPG5-204ENST00000465441 SSC5DA1L4H1 1573 aa26.16■■□□□ 1.78
CSPG5-204ENST00000465441 ECM29Q5VYK3 1845 aa26.16■■□□□ 1.78
CSPG5-204ENST00000465441 FRAT2O75474 233 aaPredicted RBP26.16■■□□□ 1.78
CSPG5-204ENST00000465441 CRKP46108 304 aa26.16■■□□□ 1.78
CSPG5-204ENST00000465441 RFX5P48382 616 aaPredicted RBP26.16■■□□□ 1.78
CSPG5-204ENST00000465441 BCAMP50895 628 aa26.16■■□□□ 1.78
CSPG5-204ENST00000465441 GPR25O00155 361 aa26.15■■□□□ 1.78
CSPG5-204ENST00000465441 UNCXA6NJT0 531 aa26.14■■□□□ 1.78
CSPG5-204ENST00000465441 FGFR2P21802 821 aa26.14■■□□□ 1.78
CSPG5-204ENST00000465441 WNK4Q96J92 1243 aa26.14■■□□□ 1.78
CSPG5-204ENST00000465441 R3HDMLQ9H3Y0 253 aa26.14■■□□□ 1.78
CSPG5-204ENST00000465441 NOB1Q9ULX3 412 aaKnown RBP26.14■■□□□ 1.78
CSPG5-204ENST00000465441 MANSC4A6NHS7 340 aaPredicted RBP26.13■■□□□ 1.77
CSPG5-204ENST00000465441 EYA2O00167 538 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms