RNA–Protein interactions for RNA: ENST00000465423.5

PCCB-206, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-206ENST00000465423 KAZALD1Q96I82 304 aa18.06■□□□□ 0.48
PCCB-206ENST00000465423 MYOZ2Q9NPC6 264 aa18.06■□□□□ 0.48
PCCB-206ENST00000465423 ZNF646O15015 1829 aaPredicted RBP18.05■□□□□ 0.48
PCCB-206ENST00000465423 CSF1RP07333 972 aa18.05■□□□□ 0.48
PCCB-206ENST00000465423 ATP2B4P23634 1241 aa18.05■□□□□ 0.48
PCCB-206ENST00000465423 ERICH6BQ5W0A0 696 aa18.05■□□□□ 0.48
PCCB-206ENST00000465423 BICC1Q9H694 974 aaKnown RBP18.05■□□□□ 0.48
PCCB-206ENST00000465423 PAPPA2Q9BXP8 1791 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 USP17L3A6NCW0 530 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 USP17L4A6NCW7 530 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 WTIPA6NIX2 430 aaPredicted RBP18.04■□□□□ 0.48
PCCB-206ENST00000465423 MTX1Q13505 466 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 EPHA10Q5JZY3 1008 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 USP17L1Q7RTZ2 530 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 ANKRD18AQ8IVF6 992 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 RPAP2Q8IXW5 612 aaPredicted RBP18.04■□□□□ 0.48
PCCB-206ENST00000465423 TTLL11Q8NHH1 800 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 CCDC85AQ96PX6 553 aaPredicted RBP18.04■□□□□ 0.48
PCCB-206ENST00000465423 MYH3P11055 1940 aa18.04■□□□□ 0.48
PCCB-206ENST00000465423 LMBR1LQ6UX01 489 aa18.03■□□□□ 0.48
PCCB-206ENST00000465423 ANKRD44Q8N8A2 993 aa18.03■□□□□ 0.48
PCCB-206ENST00000465423 C1orf115Q9H7X2 142 aa18.03■□□□□ 0.48
PCCB-206ENST00000465423 ATP8B2P98198 1209 aa18.02■□□□□ 0.48
PCCB-206ENST00000465423 CEP85Q6P2H3 762 aa18.02■□□□□ 0.48
PCCB-206ENST00000465423 CTU1Q7Z7A3 348 aaKnown RBP18.02■□□□□ 0.48
PCCB-206ENST00000465423 BSDC1Q9NW68 430 aaPredicted RBP18.02■□□□□ 0.48
PCCB-206ENST00000465423 MINPP1Q9UNW1 487 aa18.02■□□□□ 0.48
PCCB-206ENST00000465423 DACT2Q5SW24 774 aa18.01■□□□□ 0.47
PCCB-206ENST00000465423 MOB2Q70IA6 237 aa18.01■□□□□ 0.47
PCCB-206ENST00000465423 CDC5LQ99459 802 aaKnown RBP18.01■□□□□ 0.47
PCCB-206ENST00000465423 MED23Q9ULK4 1368 aa18.01■□□□□ 0.47
PCCB-206ENST00000465423 NBPF9Q3BBW0 867 aa18■□□□□ 0.47
PCCB-206ENST00000465423 CHMP3Q9Y3E7 222 aa18■□□□□ 0.47
PCCB-206ENST00000465423 UBE2Q2LH0YL09 131 aa17.99■□□□□ 0.47
PCCB-206ENST00000465423 HMMRO75330 724 aa17.99■□□□□ 0.47
PCCB-206ENST00000465423 TM4SF4P48230 202 aa17.99■□□□□ 0.47
PCCB-206ENST00000465423 IFIT5Q13325 482 aaKnown RBP17.99■□□□□ 0.47
PCCB-206ENST00000465423 CCDC57Q2TAC2 916 aa17.99■□□□□ 0.47
PCCB-206ENST00000465423 GREM2Q9H772 168 aa17.99■□□□□ 0.47
PCCB-206ENST00000465423 SCAF8Q9UPN6 1271 aaKnown RBP17.99■□□□□ 0.47
PCCB-206ENST00000465423 SPEF2Q9C093 1822 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 ANKRD18BA2A2Z9 1011 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 WNT10BO00744 389 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 SRGAP3O43295 1099 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 ITGA6P23229 1130 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 MMP14P50281 582 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 SOX10P56693 466 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 POLA2Q14181 598 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 STRIP1Q5VSL9 837 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 PRAMEF18Q5VWM3 479 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 SSH3Q8TE77 659 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 MXD3Q9BW11 206 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 PCDHB15Q9Y5E8 787 aa17.98■□□□□ 0.47
PCCB-206ENST00000465423 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
PCCB-206ENST00000465423 NOM1Q5C9Z4 860 aaKnown RBP17.97■□□□□ 0.47
PCCB-206ENST00000465423 TXNRD3Q86VQ6 643 aa17.97■□□□□ 0.47
PCCB-206ENST00000465423 COA1Q9GZY4 146 aa17.97■□□□□ 0.47
PCCB-206ENST00000465423 MYO3BQ8WXR4 1341 aa17.97■□□□□ 0.47
PCCB-206ENST00000465423 RFX5P48382 616 aaPredicted RBP17.96■□□□□ 0.47
PCCB-206ENST00000465423 PKN2Q16513 984 aaKnown RBP17.96■□□□□ 0.47
PCCB-206ENST00000465423 OGFOD1Q8N543 542 aa17.96■□□□□ 0.47
PCCB-206ENST00000465423 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.47
PCCB-206ENST00000465423 LEMD3Q9Y2U8 911 aa17.96■□□□□ 0.47
PCCB-206ENST00000465423 TBC1D8O95759 1140 aa17.95■□□□□ 0.46
PCCB-206ENST00000465423 TAF7LQ5H9L4 462 aa17.95■□□□□ 0.46
PCCB-206ENST00000465423 SIRT2Q8IXJ6 389 aa17.95■□□□□ 0.46
PCCB-206ENST00000465423 ZNF296Q8WUU4 475 aaPredicted RBP17.95■□□□□ 0.46
PCCB-206ENST00000465423 ZBED3Q96IU2 234 aaPredicted RBP17.95■□□□□ 0.46
PCCB-206ENST00000465423 COPRSQ9NQ92 184 aa17.95■□□□□ 0.46
PCCB-206ENST00000465423 FBXO3Q9UK99 471 aa17.95■□□□□ 0.46
PCCB-206ENST00000465423 IGHMBP2P38935 993 aaKnown RBP17.94■□□□□ 0.46
PCCB-206ENST00000465423 HDAC1Q13547 482 aaPredicted RBP17.94■□□□□ 0.46
PCCB-206ENST00000465423 CFHR5Q9BXR6 569 aa17.94■□□□□ 0.46
PCCB-206ENST00000465423 PTPN12Q05209 780 aaKnown RBP17.93■□□□□ 0.46
PCCB-206ENST00000465423 LDLRAD1Q5T700 205 aa17.93■□□□□ 0.46
PCCB-206ENST00000465423 RWDD1Q9H446 243 aaPredicted RBP17.93■□□□□ 0.46
PCCB-206ENST00000465423 GPR25O00155 361 aa17.92■□□□□ 0.46
PCCB-206ENST00000465423 NF2P35240 595 aa17.92■□□□□ 0.46
PCCB-206ENST00000465423 TTLL5Q6EMB2 1281 aa17.92■□□□□ 0.46
PCCB-206ENST00000465423 MPHOSPH8Q99549 860 aa17.92■□□□□ 0.46
PCCB-206ENST00000465423 NOP58Q9Y2X3 529 aaKnown RBP17.92■□□□□ 0.46
PCCB-206ENST00000465423 ZNF804BA4D1E1 1349 aa17.92■□□□□ 0.46
PCCB-206ENST00000465423 CIAO1O76071 339 aa17.91■□□□□ 0.46
PCCB-206ENST00000465423 SASH1O94885 1247 aa17.91■□□□□ 0.46
PCCB-206ENST00000465423 KLRK1P26718 216 aa17.91■□□□□ 0.46
PCCB-206ENST00000465423 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
PCCB-206ENST00000465423 LDHAL6AQ6ZMR3 332 aa17.91■□□□□ 0.46
PCCB-206ENST00000465423 ANKRD2Q9GZV1 360 aa17.91■□□□□ 0.46
PCCB-206ENST00000465423 HDAC9Q9UKV0 1011 aa17.91■□□□□ 0.46
PCCB-206ENST00000465423 IRS2Q9Y4H2 1338 aa17.91■□□□□ 0.46
PCCB-206ENST00000465423 EYA2O00167 538 aa17.9■□□□□ 0.46
PCCB-206ENST00000465423 TTLL12Q14166 644 aaPredicted RBP17.9■□□□□ 0.46
PCCB-206ENST00000465423 ZNF594Q96JF6 807 aaPredicted RBP17.9■□□□□ 0.46
PCCB-206ENST00000465423 PPP4R2Q9NY27 417 aa17.9■□□□□ 0.46
PCCB-206ENST00000465423 SURF6O75683 361 aaKnown RBP17.89■□□□□ 0.45
PCCB-206ENST00000465423 SREBF2Q12772 1141 aa17.89■□□□□ 0.45
PCCB-206ENST00000465423 G3BP1Q13283 466 aaKnown RBP eCLIP17.89■□□□□ 0.452e-6■■■■□ 23.6
PCCB-206ENST00000465423 PRPF38BQ5VTL8 546 aaKnown RBP17.89■□□□□ 0.45
PCCB-206ENST00000465423 SPRYD7Q5W111 196 aa17.89■□□□□ 0.45
PCCB-206ENST00000465423 ARMC9Q7Z3E5 817 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms