RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 CNNM1Q9NRU3 951 aa28.84■■■□□ 2.21
USP42-205ENST00000465073 TM4SF4P48230 202 aa28.83■■■□□ 2.21
USP42-205ENST00000465073 SLC4A10Q6U841 1118 aa28.83■■■□□ 2.21
USP42-205ENST00000465073 SRCIN1Q9C0H9 1055 aa28.83■■■□□ 2.21
USP42-205ENST00000465073 PLIN1O60240 522 aa28.82■■■□□ 2.2
USP42-205ENST00000465073 PTPN12Q05209 780 aaKnown RBP28.82■■■□□ 2.2
USP42-205ENST00000465073 DEFB129Q9H1M3 183 aa28.82■■■□□ 2.2
USP42-205ENST00000465073 CTU1Q7Z7A3 348 aaKnown RBP28.81■■■□□ 2.2
USP42-205ENST00000465073 COL1A1P02452 1464 aaPredicted RBP28.8■■■□□ 2.2
USP42-205ENST00000465073 LDLRAD1Q5T700 205 aa28.8■■■□□ 2.2
USP42-205ENST00000465073 MYO1BO43795 1136 aa28.79■■■□□ 2.2
USP42-205ENST00000465073 PRKG1Q13976 671 aa28.79■■■□□ 2.2
USP42-205ENST00000465073 PPP2R3BQ9Y5P8 575 aa28.79■■■□□ 2.2
USP42-205ENST00000465073 SREBF2Q12772 1141 aa28.78■■■□□ 2.2
USP42-205ENST00000465073 CFAP100Q494V2 611 aa28.78■■■□□ 2.2
USP42-205ENST00000465073 ANGEL1Q9UNK9 670 aaKnown RBP28.78■■■□□ 2.2
USP42-205ENST00000465073 F8W031 263 aaPredicted RBP28.78■■■□□ 2.2
USP42-205ENST00000465073 UBE4AQ14139 1066 aa28.78■■■□□ 2.2
USP42-205ENST00000465073 SPDYE2BA6NHP3 402 aa28.77■■■□□ 2.2
USP42-205ENST00000465073 TBC1D8O95759 1140 aa28.77■■■□□ 2.2
USP42-205ENST00000465073 SPDYE6P0CI01 402 aa28.77■■■□□ 2.2
USP42-205ENST00000465073 MKRN3Q13064 507 aaKnown RBP28.77■■■□□ 2.2
USP42-205ENST00000465073 NOM1Q5C9Z4 860 aaKnown RBP28.76■■■□□ 2.19
USP42-205ENST00000465073 SUCLG2Q96I99 432 aa28.76■■■□□ 2.19
USP42-205ENST00000465073 PCDHAC2Q9Y5I4 1007 aa28.76■■■□□ 2.19
USP42-205ENST00000465073 FAM205AQ6ZU69 1335 aa28.75■■■□□ 2.19
USP42-205ENST00000465073 ZNF521Q96K83 1311 aa28.75■■■□□ 2.19
USP42-205ENST00000465073 PPP1R12BO60237 982 aaPredicted RBP28.75■■■□□ 2.19
USP42-205ENST00000465073 SPRYD7Q5W111 196 aa28.75■■■□□ 2.19
USP42-205ENST00000465073 KAZALD1Q96I82 304 aa28.75■■■□□ 2.19
USP42-205ENST00000465073 PRMT6Q96LA8 375 aaPredicted RBP28.75■■■□□ 2.19
USP42-205ENST00000465073 JAG2Q9Y219 1238 aa28.75■■■□□ 2.19
USP42-205ENST00000465073 A0A1B0GUL6 1792 aa28.75■■■□□ 2.19
USP42-205ENST00000465073 UTYO14607 1347 aa28.75■■■□□ 2.19
USP42-205ENST00000465073 PKN2Q16513 984 aaKnown RBP28.74■■■□□ 2.19
USP42-205ENST00000465073 MAP3K11Q16584 847 aa28.74■■■□□ 2.19
USP42-205ENST00000465073 SUPT20HL1Q3ZLR7 823 aa28.74■■■□□ 2.19
USP42-205ENST00000465073 TDRD7Q8NHU6 1098 aaKnown RBP28.74■■■□□ 2.19
USP42-205ENST00000465073 ZNF296Q8WUU4 475 aaPredicted RBP28.74■■■□□ 2.19
USP42-205ENST00000465073 SLC10A4Q96EP9 437 aa28.74■■■□□ 2.19
USP42-205ENST00000465073 CLRN2A0PK11 232 aa28.73■■■□□ 2.19
USP42-205ENST00000465073 NBPF7P0C2Y1 421 aaPredicted RBP28.73■■■□□ 2.19
USP42-205ENST00000465073 HIBADHP31937 336 aaKnown RBP28.73■■■□□ 2.19
USP42-205ENST00000465073 UNCXA6NJT0 531 aa28.72■■■□□ 2.19
USP42-205ENST00000465073 RBM5P52756 815 aaKnown RBP eCLIP28.72■■■□□ 2.19
USP42-205ENST00000465073 CFHR5Q9BXR6 569 aa28.72■■■□□ 2.19
USP42-205ENST00000465073 PUS3Q9BZE2 481 aaKnown RBP28.72■■■□□ 2.19
USP42-205ENST00000465073 RIPOR2Q9Y4F9 1068 aa28.72■■■□□ 2.19
USP42-205ENST00000465073 FAM84BQ96KN1 310 aaPredicted RBP28.72■■■□□ 2.19
USP42-205ENST00000465073 VEZTQ9HBM0 779 aa28.72■■■□□ 2.19
USP42-205ENST00000465073 MROH5Q6ZUA9 1318 aa28.71■■■□□ 2.19
USP42-205ENST00000465073 GPR25O00155 361 aa28.71■■■□□ 2.19
USP42-205ENST00000465073 GYG1P46976 350 aa28.71■■■□□ 2.19
USP42-205ENST00000465073 INHBEP58166 350 aa28.71■■■□□ 2.19
USP42-205ENST00000465073 MFSD14BQ5SR56 506 aa28.71■■■□□ 2.19
USP42-205ENST00000465073 FZD1Q9UP38 647 aa28.71■■■□□ 2.19
USP42-205ENST00000465073 MRPL50Q8N5N7 158 aaKnown RBP28.7■■■□□ 2.18
USP42-205ENST00000465073 MANSC4A6NHS7 340 aaPredicted RBP28.69■■■□□ 2.18
USP42-205ENST00000465073 ALDH1A1P00352 501 aa28.69■■■□□ 2.18
USP42-205ENST00000465073 RABL6Q3YEC7 729 aaPredicted RBP28.69■■■□□ 2.18
USP42-205ENST00000465073 BICC1Q9H694 974 aaKnown RBP28.69■■■□□ 2.18
USP42-205ENST00000465073 SERPINA10Q9UK55 444 aa28.69■■■□□ 2.18
USP42-205ENST00000465073 SSC5DA1L4H1 1573 aa28.68■■■□□ 2.18
USP42-205ENST00000465073 ZBTB48P10074 688 aaPredicted RBP28.68■■■□□ 2.18
USP42-205ENST00000465073 TTF2Q9UNY4 1162 aaKnown RBP28.68■■■□□ 2.18
USP42-205ENST00000465073 PTPRCP08575 1304 aa28.68■■■□□ 2.18
USP42-205ENST00000465073 AOX1Q06278 1338 aa28.68■■■□□ 2.18
USP42-205ENST00000465073 RASA3Q14644 834 aa28.67■■■□□ 2.18
USP42-205ENST00000465073 NBPF12Q5TAG4 269 aaPredicted RBP28.67■■■□□ 2.18
USP42-205ENST00000465073 HPS5Q9UPZ3 1129 aa28.67■■■□□ 2.18
USP42-205ENST00000465073 IREB2P48200 963 aaKnown RBP28.66■■■□□ 2.18
USP42-205ENST00000465073 SOX10P56693 466 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 TNFAIP1Q13829 316 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 CLMNQ96JQ2 1002 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 E9PSI1 815 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 FKTNO75072 461 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 SPDYE2Q495Y8 402 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 ECM29Q5VYK3 1845 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 VPS37DQ86XT2 251 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 WNK4Q96J92 1243 aa28.66■■■□□ 2.18
USP42-205ENST00000465073 ZNF70Q9UC06 446 aaPredicted RBP28.66■■■□□ 2.18
USP42-205ENST00000465073 FBXO33Q7Z6M2 555 aa28.65■■■□□ 2.18
USP42-205ENST00000465073 ANKRD44Q8N8A2 993 aa28.65■■■□□ 2.18
USP42-205ENST00000465073 USP2O75604 605 aaPredicted RBP28.64■■■□□ 2.17
USP42-205ENST00000465073 METTL24Q5JXM2 366 aa28.64■■■□□ 2.17
USP42-205ENST00000465073 IFNL1Q8IU54 200 aa28.64■■■□□ 2.17
USP42-205ENST00000465073 R3HDMLQ9H3Y0 253 aa28.64■■■□□ 2.17
USP42-205ENST00000465073 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.64■■■□□ 2.17
USP42-205ENST00000465073 LRRC24Q50LG9 513 aa28.63■■■□□ 2.17
USP42-205ENST00000465073 CAVIN4Q5BKX8 364 aa28.63■■■□□ 2.17
USP42-205ENST00000465073 DZIP1LQ8IYY4 767 aaKnown RBP28.63■■■□□ 2.17
USP42-205ENST00000465073 TDRD3Q9H7E2 651 aaKnown RBP28.63■■■□□ 2.17
USP42-205ENST00000465073 ANKRD13AQ8IZ07 590 aa28.62■■■□□ 2.17
USP42-205ENST00000465073 SSH1Q8WYL5 1049 aa28.62■■■□□ 2.17
USP42-205ENST00000465073 PDE8BO95263 885 aa28.61■■■□□ 2.17
USP42-205ENST00000465073 CRKP46108 304 aa28.61■■■□□ 2.17
USP42-205ENST00000465073 USP44Q9H0E7 712 aa28.61■■■□□ 2.17
USP42-205ENST00000465073 FBXO46Q6PJ61 603 aaPredicted RBP28.6■■■□□ 2.17
USP42-205ENST00000465073 TBC1D22AQ8WUA7 517 aa28.6■■■□□ 2.17
USP42-205ENST00000465073 FRAT2O75474 233 aaPredicted RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms