RNA–Protein interactions for RNA: ENST00000464408.3

ALMS1-202, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-202ENST00000464408 CCDC85CA6NKD9 419 aa18.36■□□□□ 0.53
ALMS1-202ENST00000464408 IL1R1P14778 569 aa18.36■□□□□ 0.53
ALMS1-202ENST00000464408 PRKG1Q13976 671 aa18.35■□□□□ 0.53
ALMS1-202ENST00000464408 TTLL12Q14166 644 aaPredicted RBP18.35■□□□□ 0.53
ALMS1-202ENST00000464408 ZNF804AQ7Z570 1209 aa18.35■□□□□ 0.53
ALMS1-202ENST00000464408 SAGE1Q9NXZ1 904 aa18.35■□□□□ 0.53
ALMS1-202ENST00000464408 HDAC9Q9UKV0 1011 aa18.35■□□□□ 0.53
ALMS1-202ENST00000464408 UTYO14607 1347 aa18.34■□□□□ 0.53
ALMS1-202ENST00000464408 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
ALMS1-202ENST00000464408 DGKZQ13574 1117 aa18.34■□□□□ 0.53
ALMS1-202ENST00000464408 SSH1Q8WYL5 1049 aa18.34■□□□□ 0.53
ALMS1-202ENST00000464408 BICC1Q9H694 974 aaKnown RBP18.34■□□□□ 0.53
ALMS1-202ENST00000464408 ARAP2Q8WZ64 1704 aa18.34■□□□□ 0.53
ALMS1-202ENST00000464408 SSC5DA1L4H1 1573 aa18.34■□□□□ 0.53
ALMS1-202ENST00000464408 GYG1P46976 350 aa18.33■□□□□ 0.52
ALMS1-202ENST00000464408 DLGAP5Q15398 846 aa18.33■□□□□ 0.52
ALMS1-202ENST00000464408 APOBEC3FQ8IUX4 373 aaKnown RBP18.33■□□□□ 0.52
ALMS1-202ENST00000464408 ANKRD44Q8N8A2 993 aa18.33■□□□□ 0.52
ALMS1-202ENST00000464408 CDCA7LQ96GN5 454 aa18.33■□□□□ 0.52
ALMS1-202ENST00000464408 CLRN2A0PK11 232 aa18.32■□□□□ 0.52
ALMS1-202ENST00000464408 MMP14P50281 582 aa18.32■□□□□ 0.52
ALMS1-202ENST00000464408 PTPN12Q05209 780 aaKnown RBP18.32■□□□□ 0.52
ALMS1-202ENST00000464408 CFAP100Q494V2 611 aa18.32■□□□□ 0.52
ALMS1-202ENST00000464408 E9PSI1 815 aa18.31■□□□□ 0.52
ALMS1-202ENST00000464408 SLFN5Q08AF3 891 aa18.31■□□□□ 0.52
ALMS1-202ENST00000464408 LRRC24Q50LG9 513 aa18.31■□□□□ 0.52
ALMS1-202ENST00000464408 MTMR14Q8NCE2 650 aa18.31■□□□□ 0.52
ALMS1-202ENST00000464408 PRMT6Q96LA8 375 aaPredicted RBP18.31■□□□□ 0.52
ALMS1-202ENST00000464408 RIPOR2Q9Y4F9 1068 aa18.31■□□□□ 0.52
ALMS1-202ENST00000464408 SPDYE2BA6NHP3 402 aa18.3■□□□□ 0.52
ALMS1-202ENST00000464408 SPDYE6P0CI01 402 aa18.3■□□□□ 0.52
ALMS1-202ENST00000464408 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
ALMS1-202ENST00000464408 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
ALMS1-202ENST00000464408 KLHDC4Q8TBB5 520 aa18.3■□□□□ 0.52
ALMS1-202ENST00000464408 FAM84BQ96KN1 310 aaPredicted RBP18.3■□□□□ 0.52
ALMS1-202ENST00000464408 DEFB129Q9H1M3 183 aa18.3■□□□□ 0.52
ALMS1-202ENST00000464408 PTPRCP08575 1304 aa18.29■□□□□ 0.52
ALMS1-202ENST00000464408 FAM205AQ6ZU69 1335 aa18.29■□□□□ 0.52
ALMS1-202ENST00000464408 COL1A1P02452 1464 aaPredicted RBP18.29■□□□□ 0.52
ALMS1-202ENST00000464408 NF2P35240 595 aa18.29■□□□□ 0.52
ALMS1-202ENST00000464408 FKBP1AP62942 108 aaKnown RBP18.29■□□□□ 0.52
ALMS1-202ENST00000464408 UBE4AQ14139 1066 aa18.29■□□□□ 0.52
ALMS1-202ENST00000464408 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.29■□□□□ 0.52
ALMS1-202ENST00000464408 ANGEL1Q9UNK9 670 aaKnown RBP18.29■□□□□ 0.52
ALMS1-202ENST00000464408 OTOFQ9HC10 1997 aa18.28■□□□□ 0.52
ALMS1-202ENST00000464408 HIBADHP31937 336 aaKnown RBP18.28■□□□□ 0.52
ALMS1-202ENST00000464408 GRIK5Q16478 980 aa18.28■□□□□ 0.52
ALMS1-202ENST00000464408 MFSD14BQ5SR56 506 aa18.28■□□□□ 0.52
ALMS1-202ENST00000464408 LDLRAD1Q5T700 205 aa18.28■□□□□ 0.52
ALMS1-202ENST00000464408 USP44Q9H0E7 712 aa18.28■□□□□ 0.52
ALMS1-202ENST00000464408 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
ALMS1-202ENST00000464408 IQSEC3Q9UPP2 1182 aaPredicted RBP18.28■□□□□ 0.52
ALMS1-202ENST00000464408 TBC1D8O95759 1140 aa18.27■□□□□ 0.52
ALMS1-202ENST00000464408 RBM5P52756 815 aaKnown RBP eCLIP18.27■□□□□ 0.52
ALMS1-202ENST00000464408 ARMC9Q7Z3E5 817 aa18.27■□□□□ 0.52
ALMS1-202ENST00000464408 CLMNQ96JQ2 1002 aa18.27■□□□□ 0.52
ALMS1-202ENST00000464408 MROH5Q6ZUA9 1318 aa18.26■□□□□ 0.51
ALMS1-202ENST00000464408 NBPF12Q5TAG4 269 aaPredicted RBP18.26■□□□□ 0.51
ALMS1-202ENST00000464408 REM2Q8IYK8 340 aaPredicted RBP18.26■□□□□ 0.51
ALMS1-202ENST00000464408 VGLL2Q8N8G2 317 aa18.26■□□□□ 0.51
ALMS1-202ENST00000464408 TTF2Q9UNY4 1162 aaKnown RBP18.26■□□□□ 0.51
ALMS1-202ENST00000464408 LAMB1P07942 1786 aa18.25■□□□□ 0.51
ALMS1-202ENST00000464408 TM4SF4P48230 202 aa18.25■□□□□ 0.51
ALMS1-202ENST00000464408 METTL24Q5JXM2 366 aa18.25■□□□□ 0.51
ALMS1-202ENST00000464408 FBXO33Q7Z6M2 555 aa18.25■□□□□ 0.51
ALMS1-202ENST00000464408 CDAN1Q8IWY9 1227 aa18.25■□□□□ 0.51
ALMS1-202ENST00000464408 R3HDMLQ9H3Y0 253 aa18.25■□□□□ 0.51
ALMS1-202ENST00000464408 MYH13Q9UKX3 1938 aa18.24■□□□□ 0.51
ALMS1-202ENST00000464408 MYO1BO43795 1136 aa18.24■□□□□ 0.51
ALMS1-202ENST00000464408 CHAF1AQ13111 956 aaPredicted RBP18.24■□□□□ 0.51
ALMS1-202ENST00000464408 SPRYD7Q5W111 196 aa18.24■□□□□ 0.51
ALMS1-202ENST00000464408 TRMT2AQ8IZ69 625 aaKnown RBP18.24■□□□□ 0.51
ALMS1-202ENST00000464408 SMC4Q9NTJ3 1288 aa18.24■□□□□ 0.51
ALMS1-202ENST00000464408 RFX5P48382 616 aaPredicted RBP18.23■□□□□ 0.51
ALMS1-202ENST00000464408 RGS19P49795 217 aa18.23■□□□□ 0.51
ALMS1-202ENST00000464408 BCAMP50895 628 aa18.23■□□□□ 0.51
ALMS1-202ENST00000464408 RASA3Q14644 834 aa18.23■□□□□ 0.51
ALMS1-202ENST00000464408 MAP3K11Q16584 847 aa18.23■□□□□ 0.51
ALMS1-202ENST00000464408 SPDYE2Q495Y8 402 aa18.23■□□□□ 0.51
ALMS1-202ENST00000464408 ZNF296Q8WUU4 475 aaPredicted RBP18.23■□□□□ 0.51
ALMS1-202ENST00000464408 TDRD3Q9H7E2 651 aaKnown RBP18.23■□□□□ 0.51
ALMS1-202ENST00000464408 ZNF70Q9UC06 446 aaPredicted RBP18.23■□□□□ 0.51
ALMS1-202ENST00000464408 PPP2R3BQ9Y5P8 575 aa18.23■□□□□ 0.51
ALMS1-202ENST00000464408 PDE8BO95263 885 aa18.22■□□□□ 0.51
ALMS1-202ENST00000464408 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
ALMS1-202ENST00000464408 CTU1Q7Z7A3 348 aaKnown RBP18.22■□□□□ 0.51
ALMS1-202ENST00000464408 SERPINA10Q9UK55 444 aa18.22■□□□□ 0.51
ALMS1-202ENST00000464408 USP2O75604 605 aaPredicted RBP18.21■□□□□ 0.51
ALMS1-202ENST00000464408 GJA5P36382 358 aa18.21■□□□□ 0.51
ALMS1-202ENST00000464408 CRKP46108 304 aa18.21■□□□□ 0.51
ALMS1-202ENST00000464408 VPS37DQ86XT2 251 aa18.21■□□□□ 0.51
ALMS1-202ENST00000464408 DZIP1LQ8IYY4 767 aaKnown RBP18.21■□□□□ 0.51
ALMS1-202ENST00000464408 SLC10A4Q96EP9 437 aa18.21■□□□□ 0.51
ALMS1-202ENST00000464408 WNK4Q96J92 1243 aa18.21■□□□□ 0.51
ALMS1-202ENST00000464408 TCP10L2B9ZVM9 353 aa18.2■□□□□ 0.5
ALMS1-202ENST00000464408 PPP1R12BO60237 982 aaPredicted RBP18.2■□□□□ 0.5
ALMS1-202ENST00000464408 FGFR2P21802 821 aa18.2■□□□□ 0.5
ALMS1-202ENST00000464408 MLLT1Q03111 559 aaPredicted RBP18.2■□□□□ 0.5
ALMS1-202ENST00000464408 SREBF2Q12772 1141 aa18.2■□□□□ 0.5
ALMS1-202ENST00000464408 TNRC18O15417 2968 aaPredicted RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms