RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 AKAP2Q9Y2D5 859 aa16.21■□□□□ 0.18
R3HDM1-213ENST00000463230 SHTN1A0MZ66 631 aa16.2■□□□□ 0.18
R3HDM1-213ENST00000463230 GYG1P46976 350 aa16.2■□□□□ 0.18
R3HDM1-213ENST00000463230 MYOZ2Q9NPC6 264 aa16.2■□□□□ 0.18
R3HDM1-213ENST00000463230 PA2G4Q9UQ80 394 aaKnown RBP16.2■□□□□ 0.18
R3HDM1-213ENST00000463230 PITPNM2Q9BZ72 1349 aa16.19■□□□□ 0.18
R3HDM1-213ENST00000463230 TBC1D10BQ4KMP7 808 aaPredicted RBP16.19■□□□□ 0.18
R3HDM1-213ENST00000463230 CDC37L1Q7L3B6 337 aa16.19■□□□□ 0.18
R3HDM1-213ENST00000463230 SAMD7Q7Z3H4 446 aa16.19■□□□□ 0.18
R3HDM1-213ENST00000463230 TBC1D22AQ8WUA7 517 aa16.19■□□□□ 0.18
R3HDM1-213ENST00000463230 PNMA6EA0A0J9YXQ4 647 aa16.19■□□□□ 0.18
R3HDM1-213ENST00000463230 SEMA3EO15041 775 aa16.18■□□□□ 0.18
R3HDM1-213ENST00000463230 G3BP1Q13283 466 aaKnown RBP eCLIP16.18■□□□□ 0.18
R3HDM1-213ENST00000463230 MTMR14Q8NCE2 650 aa16.18■□□□□ 0.18
R3HDM1-213ENST00000463230 GNL3LQ9NVN8 582 aaKnown RBP16.18■□□□□ 0.18
R3HDM1-213ENST00000463230 MYH13Q9UKX3 1938 aa16.18■□□□□ 0.18
R3HDM1-213ENST00000463230 DCPSQ96C86 337 aaKnown RBP16.18■□□□□ 0.18
R3HDM1-213ENST00000463230 NOP58Q9Y2X3 529 aaKnown RBP16.18■□□□□ 0.18
R3HDM1-213ENST00000463230 SUGT1Q9Y2Z0 365 aa16.18■□□□□ 0.18
R3HDM1-213ENST00000463230 TMEM88BA6NKF7 163 aa16.17■□□□□ 0.18
R3HDM1-213ENST00000463230 GPR108Q9NPR9 543 aa16.17■□□□□ 0.18
R3HDM1-213ENST00000463230 CEP85Q6P2H3 762 aa16.17■□□□□ 0.18
R3HDM1-213ENST00000463230 CERS5Q8N5B7 392 aa16.17■□□□□ 0.18
R3HDM1-213ENST00000463230 ZBTB40Q9NUA8 1239 aa16.17■□□□□ 0.18
R3HDM1-213ENST00000463230 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
R3HDM1-213ENST00000463230 MXD3Q9BW11 206 aa16.16■□□□□ 0.18
R3HDM1-213ENST00000463230 COG6Q9Y2V7 657 aa16.16■□□□□ 0.18
R3HDM1-213ENST00000463230 ECM29Q5VYK3 1845 aa16.16■□□□□ 0.18
R3HDM1-213ENST00000463230 PDS5AQ29RF7 1337 aaKnown RBP16.16■□□□□ 0.18
R3HDM1-213ENST00000463230 EGFRP00533 1210 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 ATXN8OSP0DMR3 200 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 HOXD11P31277 338 aaPredicted RBP16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 BCAMP50895 628 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 SCARF1Q14162 830 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 MFSD14BQ5SR56 506 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 RBM26Q5T8P6 1007 aaKnown RBP16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 ZBED3Q96IU2 234 aaPredicted RBP16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 FRAT2O75474 233 aaPredicted RBP16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 TFCP2Q12800 502 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 KIAA0825Q8IV33 1275 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 WDR66Q8TBY9 1149 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 YTHDC1Q96MU7 727 aaKnown RBP16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 C1orf115Q9H7X2 142 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 MAST3O60307 1309 aa16.15■□□□□ 0.18
R3HDM1-213ENST00000463230 COL1A1P02452 1464 aaPredicted RBP16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 HMMRO75330 724 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 HDLBPQ00341 1268 aaKnown RBP16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 HSP90AB4PQ58FF6 505 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 KRT26Q7Z3Y9 468 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 SULF1Q8IWU6 871 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 DNAJC5GQ8N7S2 189 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 GGA3Q9NZ52 723 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 ERC1Q8IUD2 1116 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 MRIQ9BWK5 157 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 SERPINA10Q9UK55 444 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 DENND2AQ9ULE3 1009 aa16.14■□□□□ 0.17
R3HDM1-213ENST00000463230 POLR2AP24928 1970 aaKnown RBP16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 A0A1B0GUL7 405 aa16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 MYCNP04198 464 aaPredicted RBP16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 DLGAP5Q15398 846 aa16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 KLRG1Q96E93 195 aa16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 SALL1Q9NSC2 1324 aa16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 WNT10BO00744 389 aa16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 SURF6O75683 361 aaKnown RBP16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 OS9Q13438 667 aaPredicted RBP16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 APOBEC3FQ8IUX4 373 aaKnown RBP16.13■□□□□ 0.17
R3HDM1-213ENST00000463230 ANGEL2Q5VTE6 544 aaKnown RBP16.12■□□□□ 0.17
R3HDM1-213ENST00000463230 USP48Q86UV5 1035 aa16.12■□□□□ 0.17
R3HDM1-213ENST00000463230 TRAF5O00463 557 aa16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 CHAF1AQ13111 956 aaPredicted RBP16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 CCDC102BQ68D86 513 aa16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 CNTNAP1P78357 1384 aa16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 MYO1BO43795 1136 aa16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 ZGPATQ8N5A5 531 aaKnown RBP16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 XAGE2Q96GT9 111 aa16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 HHIPL1Q96JK4 782 aa16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 TTF2Q9UNY4 1162 aaKnown RBP16.11■□□□□ 0.17
R3HDM1-213ENST00000463230 SPDYE2BA6NHP3 402 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 RASSF10A6NK89 507 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 SPDYE6P0CI01 402 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 PHKA1P46020 1223 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 NBPF9Q3BBW0 867 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 CFAP100Q494V2 611 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 IQSEC3Q9UPP2 1182 aaPredicted RBP16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 PPP2R3BQ9Y5P8 575 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 CELF2O95319 508 aaKnown RBP16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 ADORA1P30542 326 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 TIMM10P62072 90 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 C20orf194Q5TEA3 1177 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 CST9Q5W186 159 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 JAG2Q9Y219 1238 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 TLL2Q9Y6L7 1015 aa16.1■□□□□ 0.17
R3HDM1-213ENST00000463230 UQCRFS1P1P0C7P4 283 aa16.09■□□□□ 0.17
R3HDM1-213ENST00000463230 TNNI3KQ59H18 835 aa16.09■□□□□ 0.17
R3HDM1-213ENST00000463230 FPGT-TNNI3KV9GXZ4 949 aa16.09■□□□□ 0.17
R3HDM1-213ENST00000463230 IGSF3O75054 1194 aa16.09■□□□□ 0.17
R3HDM1-213ENST00000463230 FKBP1BP68106 108 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms