RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ZBED3Q96IU2 234 aaPredicted RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 FAM84BQ96KN1 310 aaPredicted RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 PUS3Q9BZE2 481 aaKnown RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 API5Q9BZZ5 524 aaKnown RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 NOB1Q9ULX3 412 aaKnown RBP9.14□□□□□ -0.95
PTPRF-210ENST00000463041 AKAP11Q9UKA4 1901 aa9.13□□□□□ -0.95
PTPRF-210ENST00000463041 ZNF646O15015 1829 aaPredicted RBP9.13□□□□□ -0.95
PTPRF-210ENST00000463041 FAM155AB1AL88 458 aaPredicted RBP9.13□□□□□ -0.95
PTPRF-210ENST00000463041 PDE8BO95263 885 aa9.13□□□□□ -0.95
PTPRF-210ENST00000463041 NF2P35240 595 aa9.13□□□□□ -0.95
PTPRF-210ENST00000463041 RARSP54136 660 aaKnown RBP9.13□□□□□ -0.95
PTPRF-210ENST00000463041 METTL24Q5JXM2 366 aa9.13□□□□□ -0.95
PTPRF-210ENST00000463041 FBXO33Q7Z6M2 555 aa9.13□□□□□ -0.95
PTPRF-210ENST00000463041 APOBEC3FQ8IUX4 373 aaKnown RBP9.13□□□□□ -0.95
PTPRF-210ENST00000463041 A0A1B0GUL6 1792 aa9.13□□□□□ -0.95
PTPRF-210ENST00000463041 CASP8AP2Q9UKL3 1982 aa9.13□□□□□ -0.95
PTPRF-210ENST00000463041 IPO8O15397 1037 aaKnown RBP9.12□□□□□ -0.95
PTPRF-210ENST00000463041 MYO1BO43795 1136 aa9.12□□□□□ -0.95
PTPRF-210ENST00000463041 GYG1P46976 350 aa9.12□□□□□ -0.95
PTPRF-210ENST00000463041 LRRC24Q50LG9 513 aa9.12□□□□□ -0.95
PTPRF-210ENST00000463041 CAVIN4Q5BKX8 364 aa9.12□□□□□ -0.95
PTPRF-210ENST00000463041 VPS37DQ86XT2 251 aa9.12□□□□□ -0.95
PTPRF-210ENST00000463041 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
PTPRF-210ENST00000463041 FBXO3Q9UK99 471 aa9.12□□□□□ -0.95
PTPRF-210ENST00000463041 UBE2Q2LH0YL09 131 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 EYA2O00167 538 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 SLC10A3P09131 477 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 IFIT1P09914 478 aaKnown RBP9.11□□□□□ -0.95
PTPRF-210ENST00000463041 UBTFL1P0CB47 393 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-210ENST00000463041 RFX5P48382 616 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-210ENST00000463041 KIF23Q02241 960 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-210ENST00000463041 CFAP100Q494V2 611 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 PRAMEF18Q5VWM3 479 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 DIEXFQ68CQ4 756 aaKnown RBP9.11□□□□□ -0.95
PTPRF-210ENST00000463041 ARMC9Q7Z3E5 817 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 VGLL2Q8N8G2 317 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 TBC1D22AQ8WUA7 517 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 PRMT6Q96LA8 375 aaPredicted RBP9.11□□□□□ -0.95
PTPRF-210ENST00000463041 ZIC5Q96T25 663 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 MRIQ9BWK5 157 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 SCAF8Q9UPN6 1271 aaKnown RBP9.11□□□□□ -0.95
PTPRF-210ENST00000463041 THSD7BQ9C0I4 1608 aa9.11□□□□□ -0.95
PTPRF-210ENST00000463041 KIF16BQ96L93 1317 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 SPDYE2BA6NHP3 402 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 F8W031 263 aaPredicted RBP9.1□□□□□ -0.95
PTPRF-210ENST00000463041 FRAT2O75474 233 aaPredicted RBP9.1□□□□□ -0.95
PTPRF-210ENST00000463041 SPDYE6P0CI01 402 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 FGFR2P21802 821 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 RBM5P52756 815 aaKnown RBP eCLIP9.1□□□□□ -0.95
PTPRF-210ENST00000463041 HDLBPQ00341 1268 aaKnown RBP9.1□□□□□ -0.95
PTPRF-210ENST00000463041 PTPN12Q05209 780 aaKnown RBP9.1□□□□□ -0.95
PTPRF-210ENST00000463041 TTLL12Q14166 644 aaPredicted RBP9.1□□□□□ -0.95
PTPRF-210ENST00000463041 SUPT20HL1Q3ZLR7 823 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 MFSD14BQ5SR56 506 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 INTS3Q68E01 1043 aaKnown RBP9.1□□□□□ -0.95
PTPRF-210ENST00000463041 MIER1Q8N108 512 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 KLHDC4Q8TBB5 520 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 CSRNP1Q96S65 589 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 DEFB129Q9H1M3 183 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 SERPINA10Q9UK55 444 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 PPP2R3BQ9Y5P8 575 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 ECM29Q5VYK3 1845 aa9.1□□□□□ -0.95
PTPRF-210ENST00000463041 PAPPA2Q9BXP8 1791 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 UNCXA6NJT0 531 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 PPP1R12BO60237 982 aaPredicted RBP9.09□□□□□ -0.95
PTPRF-210ENST00000463041 CIAO1O76071 339 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 GNAI3P08754 354 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 BCAMP50895 628 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 PUM3Q15397 648 aaKnown RBP9.09□□□□□ -0.95
PTPRF-210ENST00000463041 LDLRAD1Q5T700 205 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 MOB2Q70IA6 237 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 LPIN2Q92539 896 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 SAGE1Q9NXZ1 904 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 CEP126Q9P2H0 1117 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 TTF2Q9UNY4 1162 aaKnown RBP9.09□□□□□ -0.95
PTPRF-210ENST00000463041 JAG2Q9Y219 1238 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 SUGT1Q9Y2Z0 365 aa9.09□□□□□ -0.95
PTPRF-210ENST00000463041 SLC5A1P13866 664 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 TM4SF4P48230 202 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 MAP3K11Q16584 847 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 ATG9AQ7Z3C6 839 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 RASAL3Q86YV0 1011 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 DZIP1LQ8IYY4 767 aaKnown RBP9.08□□□□□ -0.96
PTPRF-210ENST00000463041 COPRSQ9NQ92 184 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 RNF186Q9NXI6 227 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 TSKSQ9UJT2 592 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 PCDHAC2Q9Y5I4 1007 aa9.08□□□□□ -0.96
PTPRF-210ENST00000463041 LRRFIP2Q9Y608 721 aaKnown RBP9.08□□□□□ -0.96
PTPRF-210ENST00000463041 COL1A1P02452 1464 aaPredicted RBP9.08□□□□□ -0.96
PTPRF-210ENST00000463041 CLRN2A0PK11 232 aa9.07□□□□□ -0.96
PTPRF-210ENST00000463041 ZBTB22O15209 634 aa9.07□□□□□ -0.96
PTPRF-210ENST00000463041 TRPA1O75762 1119 aa9.07□□□□□ -0.96
PTPRF-210ENST00000463041 CAPN15O75808 1086 aa9.07□□□□□ -0.96
PTPRF-210ENST00000463041 IL15P40933 162 aaPredicted RBP9.07□□□□□ -0.96
PTPRF-210ENST00000463041 CRKP46108 304 aa9.07□□□□□ -0.96
PTPRF-210ENST00000463041 INHBEP58166 350 aa9.07□□□□□ -0.96
PTPRF-210ENST00000463041 CHAF1AQ13111 956 aaPredicted RBP9.07□□□□□ -0.96
PTPRF-210ENST00000463041 TNFAIP1Q13829 316 aa9.07□□□□□ -0.96
PTPRF-210ENST00000463041 RASA3Q14644 834 aa9.07□□□□□ -0.96
PTPRF-210ENST00000463041 ATF7IPQ6VMQ6 1270 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms