RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 PROSER2Q86WR7 435 aaPredicted RBP4.82□□□□□ -1.64
CD46-210ENST00000462968 MAP4K3Q8IVH8 894 aa4.82□□□□□ -1.64
CD46-210ENST00000462968 DEPDC4Q8N2C3 294 aa4.82□□□□□ -1.64
CD46-210ENST00000462968 POU5F2Q8N7G0 328 aa4.82□□□□□ -1.64
CD46-210ENST00000462968 DCAF11Q8TEB1 546 aa4.82□□□□□ -1.64
CD46-210ENST00000462968 C11orf16Q9NQ32 467 aa4.82□□□□□ -1.64
CD46-210ENST00000462968 A2MP01023 1474 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 POLR1AO95602 1720 aaPredicted RBP4.81□□□□□ -1.64
CD46-210ENST00000462968 SUPT6HQ7KZ85 1726 aaKnown RBP4.81□□□□□ -1.64
CD46-210ENST00000462968 KCNA6P17658 529 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 TARSP26639 723 aaKnown RBP4.81□□□□□ -1.64
CD46-210ENST00000462968 NRLP54845 237 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 NEUROD2Q15784 382 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 RTN1Q16799 776 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 TXNDC2Q86VQ3 553 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 TSEN2Q8NCE0 465 aaKnown RBP4.81□□□□□ -1.64
CD46-210ENST00000462968 DBNDD2Q9BQY9 259 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 ALG2Q9H553 416 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 C7orf69Q9H7B7 122 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 PZPP20742 1482 aa4.81□□□□□ -1.64
CD46-210ENST00000462968 CLIP1P30622 1438 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 MSH6P52701 1360 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 IQGAP1P46940 1657 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 CLTCQ00610 1675 aaKnown RBP4.8□□□□□ -1.64
CD46-210ENST00000462968 ROBO1Q9Y6N7 1651 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 WASHC2CQ9Y4E1 1318 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 DKK1O94907 266 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 EPB42P16452 691 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 EIF2AK2P19525 551 aaKnown RBP4.8□□□□□ -1.64
CD46-210ENST00000462968 LTKP29376 864 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 HNRNPMP52272 730 aaKnown RBP eCLIP4.8□□□□□ -1.641e-7■■■■■ 27.7
CD46-210ENST00000462968 UVSSAQ2YD98 709 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 HFE2Q6ZVN8 426 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 KRT25Q7Z3Z0 450 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 TRIM42Q8IWZ5 723 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 ABI1Q8IZP0 508 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 IL22RA1Q8N6P7 574 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 PLD4Q96BZ4 506 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 KRTAP4-5Q9BYR2 181 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 ATP7AQ04656 1500 aa4.8□□□□□ -1.64
CD46-210ENST00000462968 TROQ12816 1431 aaPredicted RBP4.8□□□□□ -1.64
CD46-210ENST00000462968 STRCP1A6NGW2 1772 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 KIDINS220Q9ULH0 1771 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 HMX2A2RU54 273 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 SASH3O75995 380 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 RARAP10276 462 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 ATP1A2P50993 1020 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 PLEKHM2Q8IWE5 1019 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 LARGE2Q8N3Y3 721 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 GAS2L2Q8NHY3 880 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 FAM46AQ96IP4 442 aaKnown RBP4.79□□□□□ -1.64
CD46-210ENST00000462968 C8orf37Q96NL8 207 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 TLR7Q9NYK1 1049 aaKnown RBP4.79□□□□□ -1.64
CD46-210ENST00000462968 ZNF777Q9ULD5 760 aaPredicted RBP4.79□□□□□ -1.64
CD46-210ENST00000462968 EID1Q9Y6B2 187 aa4.79□□□□□ -1.64
CD46-210ENST00000462968 PLXNC1O60486 1568 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 MYO5CQ9NQX4 1742 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 SCAF11Q99590 1463 aaKnown RBP4.78□□□□□ -1.64
CD46-210ENST00000462968 TM4SF5O14894 197 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 KIF3BO15066 747 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 WISP1O95388 367 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 HOXD8P13378 290 aaPredicted RBP4.78□□□□□ -1.64
CD46-210ENST00000462968 IDH3AP50213 366 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 GDF6Q6KF10 455 aaPredicted RBP4.78□□□□□ -1.64
CD46-210ENST00000462968 CBLL1Q75N03 491 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 SIX5Q8N196 739 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 GALNT11Q8NCW6 608 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 UTP4Q969X6 686 aaKnown RBP4.78□□□□□ -1.64
CD46-210ENST00000462968 CEP41Q9BYV8 373 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 KIF14Q15058 1648 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 SAMD9LQ8IVG5 1584 aa4.78□□□□□ -1.64
CD46-210ENST00000462968 LRP5O75197 1615 aa4.77□□□□□ -1.65
CD46-210ENST00000462968 PALM3A6NDB9 673 aaPredicted RBP4.77□□□□□ -1.65
CD46-210ENST00000462968 ARID4AP29374 1257 aaPredicted RBP4.77□□□□□ -1.65
CD46-210ENST00000462968 SHKBP1Q8TBC3 707 aa4.77□□□□□ -1.65
CD46-210ENST00000462968 SCG3Q8WXD2 468 aaKnown RBP4.77□□□□□ -1.65
CD46-210ENST00000462968 MYRFLQ96LU7 910 aa4.77□□□□□ -1.65
CD46-210ENST00000462968 TRPC5Q9UL62 973 aaPredicted RBP4.77□□□□□ -1.65
CD46-210ENST00000462968 DHX29Q7Z478 1369 aaKnown RBP4.77□□□□□ -1.65
CD46-210ENST00000462968 MAP3K1Q13233 1512 aa4.77□□□□□ -1.65
CD46-210ENST00000462968 ITSN2Q9NZM3 1697 aa4.77□□□□□ -1.65
CD46-210ENST00000462968 COL16A1Q07092 1604 aaPredicted RBP4.76□□□□□ -1.65
CD46-210ENST00000462968 LOC102724428A0A0B4J2F2 783 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 USP17L3A6NCW0 530 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 USP17L4A6NCW7 530 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 J3QW42 95 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 PHLPP1O60346 1717 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 ITGB5P18084 799 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 ARSDP51689 593 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 BLMP54132 1417 aaPredicted RBP4.76□□□□□ -1.65
CD46-210ENST00000462968 SIK1P57059 783 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 SF3B2Q13435 895 aaKnown RBP4.76□□□□□ -1.65
CD46-210ENST00000462968 USP17L2Q6R6M4 530 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 NFXL1Q6ZNB6 911 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 USP17L1Q7RTZ2 530 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 DEFB132Q7Z7B7 95 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 CLEC10AQ8IUN9 316 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 OGFOD1Q8N543 542 aa4.76□□□□□ -1.65
CD46-210ENST00000462968 LRRC59Q96AG4 307 aaKnown RBP4.76□□□□□ -1.65
CD46-210ENST00000462968 FAM83CQ9BQN1 747 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms