RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 PAK6Q9NQU5 681 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC10-205ENST00000461889 BIN2Q9UBW5 565 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC10-205ENST00000461889 SIPA1L3O60292 1781 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC10-205ENST00000461889 ANKRD36CQ5JPF3 1778 aa9.42□□□□□ -0.9
TRAPPC10-205ENST00000461889 PKD1L2Q7Z442 2459 aa9.42□□□□□ -0.9
TRAPPC10-205ENST00000461889 ADGRA2Q96PE1 1338 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 PSME4Q14997 1843 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 GPR37L1O60883 481 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 C7P10643 843 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 OSBPP22059 807 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 CTGFP29279 349 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 MMP14P50281 582 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 MRPS5P82675 430 aaKnown RBP9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 TEFQ10587 303 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 MTHFSDQ2M296 383 aaKnown RBP9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 ZNF34Q8IZ26 560 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 DIS3LQ8TF46 1054 aaKnown RBP9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 DEFB118Q96PH6 123 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 SCUBE2Q9NQ36 999 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 NSFL1CQ9UNZ2 370 aaKnown RBP9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 FZD1Q9UP38 647 aa9.41□□□□□ -0.9
TRAPPC10-205ENST00000461889 MYPNQ86TC9 1320 aa9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 C6orf229H3BNL8 230 aa9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 SNRPA1P09661 255 aaKnown RBP9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 PSMC4P43686 418 aa9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 DDX46Q7L014 1031 aaKnown RBP9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 PPP1R42Q7Z4L9 355 aa9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 ANKRD13AQ8IZ07 590 aa9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 FAM43AQ8N2R8 423 aa9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 THEGQ9P2T0 379 aa9.4□□□□□ -0.9
TRAPPC10-205ENST00000461889 COL3A1P02461 1466 aaPredicted RBP9.4□□□□□ -0.91
TRAPPC10-205ENST00000461889 MAP3K15Q6ZN16 1313 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 IL13P35225 146 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 GTF2A2P52657 109 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 SMAD3P84022 425 aaKnown RBP9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 PARP10Q53GL7 1025 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 C17orf99Q6UX52 265 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 IL17REQ8NFR9 667 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 SLC39A7Q92504 469 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 ZC3H12CQ9C0D7 883 aaKnown RBP9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 EPHX3Q9H6B9 360 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 CACNA1GO43497 2377 aa9.39□□□□□ -0.91
TRAPPC10-205ENST00000461889 CCL15-CCL14A0A0B4J2E2 113 aa9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 KCNQ3O43525 872 aa9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 GPTP24298 496 aa9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 IREB2P48200 963 aaKnown RBP9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 MDM2Q00987 491 aaPredicted RBP9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 CCL15Q16663 113 aa9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 TBC1D16Q8TBP0 767 aa9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 OPTNQ96CV9 577 aa9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 ZDBF2Q9HCK1 2354 aa9.38□□□□□ -0.91
TRAPPC10-205ENST00000461889 USP2O75604 605 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 SUPT20HL1Q3ZLR7 823 aa9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 SPNS2Q8IVW8 549 aa9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 OGFOD1Q8N543 542 aa9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 PXYLP1Q8TE99 480 aa9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 DEFB129Q9H1M3 183 aa9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 PPP2R3BQ9Y5P8 575 aa9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 LAMB2P55268 1798 aa9.37□□□□□ -0.91
TRAPPC10-205ENST00000461889 USP17L3A6NCW0 530 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 USP17L4A6NCW7 530 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 FMNL1O95466 1100 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 INHAP05111 366 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 GPSM2P81274 684 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 NHLH1Q02575 133 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 PRKCZQ05513 592 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 USP17L1Q7RTZ2 530 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 IL27Q8NEV9 243 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 ZBED3Q96IU2 234 aaPredicted RBP9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 C11orf49Q9H6J7 331 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 C11orf16Q9NQ32 467 aa9.36□□□□□ -0.91
TRAPPC10-205ENST00000461889 BTBD11A6QL63 1104 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 G3V3G9 751 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 ADCY3O60266 1144 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 BMP1P13497 986 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 MKRN4PQ13434 485 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 CDCA8Q53HL2 280 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 AKNAD1Q5T1N1 836 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 DCAF8Q5TAQ9 597 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 ASTLQ6HA08 431 aaPredicted RBP9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 PODNQ7Z5L7 613 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 UTP14AQ9BVJ6 771 aaKnown RBP9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 PODXL2Q9NZ53 605 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 CEMIPQ8WUJ3 1361 aa9.35□□□□□ -0.91
TRAPPC10-205ENST00000461889 CACNA1BQ00975 2339 aa9.34□□□□□ -0.91
TRAPPC10-205ENST00000461889 CFAP54Q96N23 3096 aa9.34□□□□□ -0.91
TRAPPC10-205ENST00000461889 SASH1O94885 1247 aa9.34□□□□□ -0.91
TRAPPC10-205ENST00000461889 MTMR14Q8NCE2 650 aa9.34□□□□□ -0.91
TRAPPC10-205ENST00000461889 NECAB3Q96P71 396 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC10-205ENST00000461889 LBHD1Q9BQE6 289 aaPredicted RBP9.34□□□□□ -0.91
TRAPPC10-205ENST00000461889 KCNH6Q9H252 994 aa9.34□□□□□ -0.91
TRAPPC10-205ENST00000461889 ELP3Q9H9T3 547 aa9.34□□□□□ -0.91
TRAPPC10-205ENST00000461889 MYO3BQ8WXR4 1341 aa9.33□□□□□ -0.92
TRAPPC10-205ENST00000461889 BAHCC1Q9P281 2608 aa9.33□□□□□ -0.92
TRAPPC10-205ENST00000461889 GNAT3A8MTJ3 354 aa9.33□□□□□ -0.92
TRAPPC10-205ENST00000461889 SMIM22K7EJ46 135 aa9.33□□□□□ -0.92
TRAPPC10-205ENST00000461889 ST18O60284 1047 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 280.5 ms