RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FOXN1O15353 648 aa19.21■□□□□ 0.67
VARS-219ENST00000461328 HUNKP57058 714 aa19.21■□□□□ 0.67
VARS-219ENST00000461328 MAP2K1Q02750 393 aaPredicted RBP19.21■□□□□ 0.67
VARS-219ENST00000461328 WBP1LQ9NX94 342 aa19.21■□□□□ 0.67
VARS-219ENST00000461328 JAG2Q9Y219 1238 aa19.21■□□□□ 0.67
VARS-219ENST00000461328 WNT10BO00744 389 aa19.2■□□□□ 0.66
VARS-219ENST00000461328 SASH1O94885 1247 aa19.2■□□□□ 0.66
VARS-219ENST00000461328 HIBADHP31937 336 aaKnown RBP19.2■□□□□ 0.66
VARS-219ENST00000461328 GYG1P46976 350 aa19.2■□□□□ 0.66
VARS-219ENST00000461328 IFFO2Q5TF58 517 aa19.2■□□□□ 0.66
VARS-219ENST00000461328 CERS5Q8N5B7 392 aa19.2■□□□□ 0.66
VARS-219ENST00000461328 THSD7BQ9C0I4 1608 aa19.19■□□□□ 0.66
VARS-219ENST00000461328 AOC2O75106 756 aa19.19■□□□□ 0.66
VARS-219ENST00000461328 FKBP1AP62942 108 aaKnown RBP19.19■□□□□ 0.66
VARS-219ENST00000461328 VPS37DQ86XT2 251 aa19.19■□□□□ 0.66
VARS-219ENST00000461328 SCAF8Q9UPN6 1271 aaKnown RBP19.19■□□□□ 0.66
VARS-219ENST00000461328 F8W031 263 aaPredicted RBP19.18■□□□□ 0.66
VARS-219ENST00000461328 PDE8BO95263 885 aa19.18■□□□□ 0.66
VARS-219ENST00000461328 MAP2K2P36507 400 aa19.18■□□□□ 0.66
VARS-219ENST00000461328 CTCFP49711 727 aaPredicted RBP19.18■□□□□ 0.66
VARS-219ENST00000461328 TMEM57Q8N5G2 664 aa19.18■□□□□ 0.66
VARS-219ENST00000461328 TDRD7Q8NHU6 1098 aaKnown RBP19.18■□□□□ 0.66
VARS-219ENST00000461328 FAM84BQ96KN1 310 aaPredicted RBP19.18■□□□□ 0.66
VARS-219ENST00000461328 BEGAINQ9BUH8 593 aa19.18■□□□□ 0.66
VARS-219ENST00000461328 SIL1Q9H173 461 aa19.18■□□□□ 0.66
VARS-219ENST00000461328 EYA2O00167 538 aa19.17■□□□□ 0.66
VARS-219ENST00000461328 RFX5P48382 616 aaPredicted RBP19.17■□□□□ 0.66
VARS-219ENST00000461328 DLGAP5Q15398 846 aa19.17■□□□□ 0.66
VARS-219ENST00000461328 CAVIN4Q5BKX8 364 aa19.17■□□□□ 0.66
VARS-219ENST00000461328 VGLL2Q8N8G2 317 aa19.17■□□□□ 0.66
VARS-219ENST00000461328 PTPN12Q05209 780 aaKnown RBP19.16■□□□□ 0.66
VARS-219ENST00000461328 RGMBQ6NW40 437 aa19.16■□□□□ 0.66
VARS-219ENST00000461328 APOBEC3FQ8IUX4 373 aaKnown RBP19.16■□□□□ 0.66
VARS-219ENST00000461328 ITPRIPQ8IWB1 547 aa19.16■□□□□ 0.66
VARS-219ENST00000461328 DZIP1LQ8IYY4 767 aaKnown RBP19.16■□□□□ 0.66
VARS-219ENST00000461328 FAM205AQ6ZU69 1335 aa19.16■□□□□ 0.66
VARS-219ENST00000461328 FRAT2O75474 233 aaPredicted RBP19.15■□□□□ 0.66
VARS-219ENST00000461328 GNAI2P04899 355 aa19.15■□□□□ 0.66
VARS-219ENST00000461328 PUM3Q15397 648 aaKnown RBP19.15■□□□□ 0.66
VARS-219ENST00000461328 MFSD14BQ5SR56 506 aa19.15■□□□□ 0.66
VARS-219ENST00000461328 PRAMEF18Q5VWM3 479 aa19.15■□□□□ 0.66
VARS-219ENST00000461328 TNS4Q8IZW8 715 aa19.15■□□□□ 0.66
VARS-219ENST00000461328 ZBED3Q96IU2 234 aaPredicted RBP19.15■□□□□ 0.66
VARS-219ENST00000461328 SRGAP3O43295 1099 aa19.14■□□□□ 0.65
VARS-219ENST00000461328 IFIT1P09914 478 aaKnown RBP19.14■□□□□ 0.65
VARS-219ENST00000461328 NOGQ13253 232 aa19.14■□□□□ 0.65
VARS-219ENST00000461328 CFAP100Q494V2 611 aa19.14■□□□□ 0.65
VARS-219ENST00000461328 FBXO33Q7Z6M2 555 aa19.14■□□□□ 0.65
VARS-219ENST00000461328 IQSEC3Q9UPP2 1182 aaPredicted RBP19.14■□□□□ 0.65
VARS-219ENST00000461328 MYO1BO43795 1136 aa19.13■□□□□ 0.65
VARS-219ENST00000461328 NF2P35240 595 aa19.13■□□□□ 0.65
VARS-219ENST00000461328 ZNF157P51786 506 aaPredicted RBP19.13■□□□□ 0.65
VARS-219ENST00000461328 RBM5P52756 815 aaKnown RBP eCLIP19.13■□□□□ 0.65
VARS-219ENST00000461328 LBX1P52954 281 aa19.13■□□□□ 0.65
VARS-219ENST00000461328 FKBP1BP68106 108 aa19.13■□□□□ 0.65
VARS-219ENST00000461328 CHAF1AQ13111 956 aaPredicted RBP19.13■□□□□ 0.65
VARS-219ENST00000461328 MTMR14Q8NCE2 650 aa19.13■□□□□ 0.65
VARS-219ENST00000461328 CCDC102AQ96A19 550 aa19.13■□□□□ 0.65
VARS-219ENST00000461328 PRDM10Q9NQV6 1147 aa19.13■□□□□ 0.65
VARS-219ENST00000461328 FBXO3Q9UK99 471 aa19.13■□□□□ 0.65
VARS-219ENST00000461328 PA2G4Q9UQ80 394 aaKnown RBP19.13■□□□□ 0.65
VARS-219ENST00000461328 PAPPA2Q9BXP8 1791 aa19.12■□□□□ 0.65
VARS-219ENST00000461328 CIAO1O76071 339 aa19.12■□□□□ 0.65
VARS-219ENST00000461328 HSPA8P11142 646 aaKnown RBP19.12■□□□□ 0.65
VARS-219ENST00000461328 SLC5A1P13866 664 aa19.12■□□□□ 0.65
VARS-219ENST00000461328 TTLL12Q14166 644 aaPredicted RBP19.12■□□□□ 0.65
VARS-219ENST00000461328 ATG9AQ7Z3C6 839 aa19.12■□□□□ 0.65
VARS-219ENST00000461328 TTF2Q9UNY4 1162 aaKnown RBP19.12■□□□□ 0.65
VARS-219ENST00000461328 PCDHAC2Q9Y5I4 1007 aa19.12■□□□□ 0.65
VARS-219ENST00000461328 SPDYE2BA6NHP3 402 aa19.11■□□□□ 0.65
VARS-219ENST00000461328 SPDYE6P0CI01 402 aa19.11■□□□□ 0.65
VARS-219ENST00000461328 RLBP1P12271 317 aa19.11■□□□□ 0.65
VARS-219ENST00000461328 FGFR2P21802 821 aa19.11■□□□□ 0.65
VARS-219ENST00000461328 BCAMP50895 628 aa19.11■□□□□ 0.65
VARS-219ENST00000461328 CEP126Q9P2H0 1117 aa19.11■□□□□ 0.65
VARS-219ENST00000461328 RCAN3Q9UKA8 241 aa19.11■□□□□ 0.65
VARS-219ENST00000461328 CLRN2A0PK11 232 aa19.1■□□□□ 0.65
VARS-219ENST00000461328 FAM155AB1AL88 458 aaPredicted RBP19.1■□□□□ 0.65
VARS-219ENST00000461328 IL15P40933 162 aaPredicted RBP19.1■□□□□ 0.65
VARS-219ENST00000461328 MOB2Q70IA6 237 aa19.1■□□□□ 0.65
VARS-219ENST00000461328 TBC1D22AQ8WUA7 517 aa19.1■□□□□ 0.65
VARS-219ENST00000461328 LPIN2Q92539 896 aa19.1■□□□□ 0.65
VARS-219ENST00000461328 PRMT6Q96LA8 375 aaPredicted RBP19.1■□□□□ 0.65
VARS-219ENST00000461328 COL1A1P02452 1464 aaPredicted RBP19.09■□□□□ 0.65
VARS-219ENST00000461328 ARAP2Q8WZ64 1704 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 MS4A1P11836 297 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 MTX1Q13505 466 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 ATP2B3Q16720 1220 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 ZIC5Q96T25 663 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 DEFB129Q9H1M3 183 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 VEZTQ9HBM0 779 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 COPRSQ9NQ92 184 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 SERPINA10Q9UK55 444 aa19.09■□□□□ 0.65
VARS-219ENST00000461328 UBE2Q2LH0YL09 131 aa19.08■□□□□ 0.64
VARS-219ENST00000461328 CA12O43570 354 aa19.08■□□□□ 0.64
VARS-219ENST00000461328 SLC10A3P09131 477 aa19.08■□□□□ 0.64
VARS-219ENST00000461328 PANK1Q8TE04 598 aa19.08■□□□□ 0.64
VARS-219ENST00000461328 YTHDC1Q96MU7 727 aaKnown RBP19.08■□□□□ 0.64
VARS-219ENST00000461328 C1orf115Q9H7X2 142 aa19.08■□□□□ 0.64
VARS-219ENST00000461328 ECM29Q5VYK3 1845 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 182.5 ms