RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 DPF2Q92785 391 aa10.09□□□□□ -0.79
SND1-202ENST00000461056 ZNF512BQ96KM6 892 aaPredicted RBP10.09□□□□□ -0.79
SND1-202ENST00000461056 DBNDD2Q9BQY9 259 aa10.09□□□□□ -0.79
SND1-202ENST00000461056 MXD3Q9BW11 206 aa10.09□□□□□ -0.79
SND1-202ENST00000461056 NMRK2Q9NPI5 230 aa10.09□□□□□ -0.79
SND1-202ENST00000461056 AKAP2Q9Y2D5 859 aa10.09□□□□□ -0.79
SND1-202ENST00000461056 ADAMTSL1Q8N6G6 1762 aa10.09□□□□□ -0.79
SND1-202ENST00000461056 PSME4Q14997 1843 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 USP17L3A6NCW0 530 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 USP17L4A6NCW7 530 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 RPS12P25398 132 aaKnown RBP10.08□□□□□ -0.8
SND1-202ENST00000461056 EIF6P56537 245 aaKnown RBP10.08□□□□□ -0.8
SND1-202ENST00000461056 RASGRF1Q13972 1273 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 SCARF1Q14162 830 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 GRIK5Q16478 980 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 RSBN1LQ6PCB5 846 aaPredicted RBP10.08□□□□□ -0.8
SND1-202ENST00000461056 USP17L1Q7RTZ2 530 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 KIF1BPQ96EK5 621 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 ZBED3Q96IU2 234 aaPredicted RBP10.08□□□□□ -0.8
SND1-202ENST00000461056 GPRC5DQ9NZD1 345 aa10.08□□□□□ -0.8
SND1-202ENST00000461056 KDM2BQ8NHM5 1336 aa10.07□□□□□ -0.8
SND1-202ENST00000461056 SALL1Q9NSC2 1324 aa10.07□□□□□ -0.8
SND1-202ENST00000461056 SEMA3EO15041 775 aa10.07□□□□□ -0.8
SND1-202ENST00000461056 EGFRP00533 1210 aa10.07□□□□□ -0.8
SND1-202ENST00000461056 TNIP1Q15025 636 aa10.07□□□□□ -0.8
SND1-202ENST00000461056 AGBL3Q8NEM8 1001 aa10.07□□□□□ -0.8
SND1-202ENST00000461056 ZNF384Q8TF68 577 aa10.07□□□□□ -0.8
SND1-202ENST00000461056 IL1RAPL2Q9NP60 686 aa10.07□□□□□ -0.8
SND1-202ENST00000461056 CCDC88AQ3V6T2 1871 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 SMARCA5O60264 1052 aaPredicted RBP10.06□□□□□ -0.8
SND1-202ENST00000461056 EPS15P42566 896 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 MCAMP43121 646 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 HIRAP54198 1017 aaPredicted RBP10.06□□□□□ -0.8
SND1-202ENST00000461056 GTF2IP78347 998 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 PI16Q6UXB8 463 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 OTUD7AQ8TE49 926 aaPredicted RBP10.06□□□□□ -0.8
SND1-202ENST00000461056 LRRCC1Q9C099 1032 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 TAF1DQ9H5J8 278 aaPredicted RBP10.06□□□□□ -0.8
SND1-202ENST00000461056 HMG20BQ9P0W2 317 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 CEP350Q5VT06 3117 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 AOX1Q06278 1338 aa10.06□□□□□ -0.8
SND1-202ENST00000461056 CENPBP07199 599 aaPredicted RBP10.05□□□□□ -0.8
SND1-202ENST00000461056 POTEIP0CG38 1075 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 POTEJP0CG39 1038 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 OS9Q13438 667 aaPredicted RBP10.05□□□□□ -0.8
SND1-202ENST00000461056 CAVIN4Q5BKX8 364 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 DPY19L2Q6NUT2 758 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 AACSQ86V21 672 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 TRPM4Q8TD43 1214 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 GCC1Q96CN9 775 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 CCDC8Q9H0W5 538 aaPredicted RBP10.05□□□□□ -0.8
SND1-202ENST00000461056 PGAP2Q9UHJ9 254 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 IQSEC3Q9UPP2 1182 aaPredicted RBP10.05□□□□□ -0.8
SND1-202ENST00000461056 JAG2Q9Y219 1238 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 SSUH2Q9Y2M2 353 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 GJA3Q9Y6H8 435 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 MYO3BQ8WXR4 1341 aa10.05□□□□□ -0.8
SND1-202ENST00000461056 NUCB1Q02818 461 aa10.04□□□□□ -0.8
SND1-202ENST00000461056 MICALL2Q8IY33 904 aa10.04□□□□□ -0.8
SND1-202ENST00000461056 MTMR14Q8NCE2 650 aa10.04□□□□□ -0.8
SND1-202ENST00000461056 ZNF526Q8TF50 670 aaPredicted RBP10.04□□□□□ -0.8
SND1-202ENST00000461056 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.04□□□□□ -0.8
SND1-202ENST00000461056 RRAGCQ9HB90 399 aa10.04□□□□□ -0.8
SND1-202ENST00000461056 HACL1Q9UJ83 578 aa10.04□□□□□ -0.8
SND1-202ENST00000461056 APBB1O00213 710 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 VEGFAP15692 232 aaPredicted RBP10.03□□□□□ -0.8
SND1-202ENST00000461056 EPHX2P34913 555 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 MFSD14BQ5SR56 506 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 C16orf71Q8IYS4 520 aaPredicted RBP10.03□□□□□ -0.8
SND1-202ENST00000461056 CLASRPQ8N2M8 674 aaKnown RBP10.03□□□□□ -0.8
SND1-202ENST00000461056 PIP4P2Q8N4L2 257 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 SPATA5Q8NB90 893 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 TBC1D22AQ8WUA7 517 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 NEUROD6Q96NK8 337 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 RWDD1Q9H446 243 aaPredicted RBP10.03□□□□□ -0.8
SND1-202ENST00000461056 GPBP1L1Q9HC44 474 aaPredicted RBP10.03□□□□□ -0.8
SND1-202ENST00000461056 ADARB2Q9NS39 739 aaKnown RBP10.03□□□□□ -0.8
SND1-202ENST00000461056 CNOT7Q9UIV1 285 aaKnown RBP10.03□□□□□ -0.8
SND1-202ENST00000461056 DENND2AQ9ULE3 1009 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 SUGT1Q9Y2Z0 365 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 PCDHAC2Q9Y5I4 1007 aa10.03□□□□□ -0.8
SND1-202ENST00000461056 RFX7Q2KHR2 1363 aa10.02□□□□□ -0.8
SND1-202ENST00000461056 IQCA1LA6NCM1 817 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 CYP2E1P05181 493 aaPredicted RBP10.02□□□□□ -0.81
SND1-202ENST00000461056 USP17L8P0C7I0 530 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 UQCRFS1P1P0C7P4 283 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 ATP5JP18859 108 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 PRDX5P30044 214 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 MMP14P50281 582 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 VPS37DQ86XT2 251 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 WDR66Q8TBY9 1149 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 PI4K2BQ8TCG2 481 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 MRIQ9BWK5 157 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 PIH1D3Q9NQM4 214 aaKnown RBP10.02□□□□□ -0.81
SND1-202ENST00000461056 GNL3LQ9NVN8 582 aaKnown RBP10.02□□□□□ -0.81
SND1-202ENST00000461056 STAP2Q9UGK3 403 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 SCN4AP35499 1836 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 GAKO14976 1311 aa10.02□□□□□ -0.81
SND1-202ENST00000461056 ASTN2O75129 1339 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms