RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 POLMQ9NP87 494 aaPredicted RBP7.61□□□□□ -1.19
NUP98-208ENST00000461047 STK17AQ9UEE5 414 aa7.61□□□□□ -1.19
NUP98-208ENST00000461047 FAM181BA6NEQ2 426 aa7.6□□□□□ -1.19
NUP98-208ENST00000461047 ESPNB1AK53 854 aa7.6□□□□□ -1.19
NUP98-208ENST00000461047 SOCS7O14512 581 aa7.6□□□□□ -1.19
NUP98-208ENST00000461047 TXNRD1Q16881 649 aa7.6□□□□□ -1.19
NUP98-208ENST00000461047 TWISTNBQ3B726 338 aaPredicted RBP7.6□□□□□ -1.19
NUP98-208ENST00000461047 RNF20Q5VTR2 975 aa7.6□□□□□ -1.19
NUP98-208ENST00000461047 DUSP27Q5VZP5 1158 aa7.6□□□□□ -1.19
NUP98-208ENST00000461047 ZNF496Q96IT1 587 aaPredicted RBP7.6□□□□□ -1.19
NUP98-208ENST00000461047 HEG1Q9ULI3 1381 aa7.59□□□□□ -1.19
NUP98-208ENST00000461047 WNK3Q9BYP7 1800 aa7.59□□□□□ -1.19
NUP98-208ENST00000461047 FANCIQ9NVI1 1328 aa7.59□□□□□ -1.19
NUP98-208ENST00000461047 A0A087WZG4 1122 aa7.59□□□□□ -1.19
NUP98-208ENST00000461047 ELL2O00472 640 aaPredicted RBP7.59□□□□□ -1.19
NUP98-208ENST00000461047 GIGYF1O75420 1035 aaPredicted RBP7.59□□□□□ -1.19
NUP98-208ENST00000461047 ADH1AP07327 375 aa7.59□□□□□ -1.19
NUP98-208ENST00000461047 EIF2S2P20042 333 aaKnown RBP7.59□□□□□ -1.19
NUP98-208ENST00000461047 EXOSC9Q06265 439 aaKnown RBP7.59□□□□□ -1.19
NUP98-208ENST00000461047 NR1H3Q13133 447 aa7.59□□□□□ -1.19
NUP98-208ENST00000461047 FLAD1Q8NFF5 587 aa7.59□□□□□ -1.19
NUP98-208ENST00000461047 TSR2Q969E8 191 aaKnown RBP7.59□□□□□ -1.19
NUP98-208ENST00000461047 ZNF395Q9H8N7 513 aaPredicted RBP7.59□□□□□ -1.19
NUP98-208ENST00000461047 DBF4Q9UBU7 674 aaPredicted RBP7.59□□□□□ -1.19
NUP98-208ENST00000461047 ERBB4Q15303 1308 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 MRC1P22897 1456 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 KCNQ3O43525 872 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 PPFIA3O75145 1194 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 CENPBP07199 599 aaPredicted RBP7.58□□□□□ -1.2
NUP98-208ENST00000461047 LCE2CQ5TA81 110 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 HDGFL1Q5TGJ6 251 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 ILDR2Q71H61 639 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 PTF1AQ7RTS3 328 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 TRMT2AQ8IZ69 625 aaKnown RBP7.58□□□□□ -1.2
NUP98-208ENST00000461047 MTMR14Q8NCE2 650 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 CAMKK2Q96RR4 588 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 INSM2Q96T92 566 aaPredicted RBP7.58□□□□□ -1.2
NUP98-208ENST00000461047 CYLDQ9NQC7 956 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 HYPKQ9NX55 129 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 STK32BQ9NY57 414 aa7.58□□□□□ -1.2
NUP98-208ENST00000461047 RTCBQ9Y3I0 505 aaKnown RBP7.58□□□□□ -1.2
NUP98-208ENST00000461047 IPO8O15397 1037 aaKnown RBP7.57□□□□□ -1.2
NUP98-208ENST00000461047 DDX58O95786 925 aaKnown RBP7.57□□□□□ -1.2
NUP98-208ENST00000461047 PTSQ03393 145 aa7.57□□□□□ -1.2
NUP98-208ENST00000461047 ALDH1L2Q3SY69 923 aa7.57□□□□□ -1.2
NUP98-208ENST00000461047 DNAJC10Q8IXB1 793 aa7.57□□□□□ -1.2
NUP98-208ENST00000461047 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.57□□□□□ -1.2
NUP98-208ENST00000461047 C8orf58Q8NAV2 365 aa7.57□□□□□ -1.2
NUP98-208ENST00000461047 ARXQ96QS3 562 aa7.57□□□□□ -1.2
NUP98-208ENST00000461047 SNRKQ9NRH2 765 aa7.57□□□□□ -1.2
NUP98-208ENST00000461047 CCDC87Q9NVE4 849 aa7.57□□□□□ -1.2
NUP98-208ENST00000461047 VAMP4O75379 141 aa7.56□□□□□ -1.2
NUP98-208ENST00000461047 RPS6KA4O75676 772 aa7.56□□□□□ -1.2
NUP98-208ENST00000461047 CYP19A1P11511 503 aaPredicted RBP7.56□□□□□ -1.2
NUP98-208ENST00000461047 IL6STP40189 918 aaPredicted RBP7.56□□□□□ -1.2
NUP98-208ENST00000461047 PTGIRP43119 386 aa7.56□□□□□ -1.2
NUP98-208ENST00000461047 CTSOP43234 321 aaPredicted RBP7.56□□□□□ -1.2
NUP98-208ENST00000461047 CRKLP46109 303 aaKnown RBP7.56□□□□□ -1.2
NUP98-208ENST00000461047 EZH2Q15910 746 aaKnown RBP7.56□□□□□ -1.2
NUP98-208ENST00000461047 TRAPPC3LQ5T215 181 aa7.56□□□□□ -1.2
NUP98-208ENST00000461047 DDX21Q9NR30 783 aaKnown RBP eCLIP7.56□□□□□ -1.2
NUP98-208ENST00000461047 TFCP2L1Q9NZI6 479 aa7.56□□□□□ -1.2
NUP98-208ENST00000461047 USP16Q9Y5T5 823 aa7.56□□□□□ -1.2
NUP98-208ENST00000461047 CNTNAP4Q9C0A0 1308 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 BRWD3Q6RI45 1802 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 NHSQ6T4R5 1651 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 ADAMTS7Q9UKP4 1686 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 LILRA1O75019 489 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 VSIG8P0DPA2 414 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 CANXP27824 592 aaKnown RBP7.55□□□□□ -1.2
NUP98-208ENST00000461047 RFC4P35249 363 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 ITPK1Q13572 414 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 KIF6Q6ZMV9 814 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 DEFB132Q7Z7B7 95 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 ZSCAN1Q8NBB4 408 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 SMC4Q9NTJ3 1288 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 SCN11AQ9UI33 1791 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 SHANK3Q9BYB0 1731 aa7.55□□□□□ -1.2
NUP98-208ENST00000461047 ATP5J2-PTCD1G3V325 749 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 A1BGP04217 495 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 MYL6BP14649 208 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 SSFA2P28290 1259 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 ADD1P35611 737 aaKnown RBP7.54□□□□□ -1.2
NUP98-208ENST00000461047 SLC15A2Q16348 729 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 LRRC4BQ9NT99 713 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 RCAN3Q9UKA8 241 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 ZNF652Q9Y2D9 606 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 DOT1LQ8TEK3 1739 aa7.54□□□□□ -1.2
NUP98-208ENST00000461047 KIF16BQ96L93 1317 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 KAT6BQ8WYB5 2073 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 KCNQ4P56696 695 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 NEXNQ0ZGT2 675 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 KRT24Q2M2I5 525 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 HSP90AB3PQ58FF7 597 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 CC2D2BQ6DHV5 1058 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 INTS5Q6P9B9 1019 aaKnown RBP7.53□□□□□ -1.2
NUP98-208ENST00000461047 CCDC155Q8N6L0 562 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 TSPYL6Q8N831 410 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 LINC00116Q8NCU8 138 aa7.53□□□□□ -1.2
NUP98-208ENST00000461047 RNF217Q8TC41 542 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms