RNA–Protein interactions for RNA: ENST00000460886.1

COL6A2-207, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 306 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-207ENST00000460886 TTLL5Q6EMB2 1281 aa11.89□□□□□ -0.51
COL6A2-207ENST00000460886 MPHOSPH8Q99549 860 aa11.89□□□□□ -0.51
COL6A2-207ENST00000460886 MXD3Q9BW11 206 aa11.89□□□□□ -0.51
COL6A2-207ENST00000460886 NBPF7P0C2Y1 421 aaPredicted RBP11.88□□□□□ -0.51
COL6A2-207ENST00000460886 FOXO4P98177 505 aa11.88□□□□□ -0.51
COL6A2-207ENST00000460886 CHRNDQ07001 517 aa11.88□□□□□ -0.51
COL6A2-207ENST00000460886 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
COL6A2-207ENST00000460886 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
COL6A2-207ENST00000460886 USP44Q9H0E7 712 aa11.88□□□□□ -0.51
COL6A2-207ENST00000460886 ANKRD18BA2A2Z9 1011 aa11.87□□□□□ -0.51
COL6A2-207ENST00000460886 TM4SF4P48230 202 aa11.87□□□□□ -0.51
COL6A2-207ENST00000460886 FKBP1AP62942 108 aaKnown RBP11.87□□□□□ -0.51
COL6A2-207ENST00000460886 INTS3Q68E01 1043 aaKnown RBP11.87□□□□□ -0.51
COL6A2-207ENST00000460886 MOB2Q70IA6 237 aa11.87□□□□□ -0.51
COL6A2-207ENST00000460886 APOBEC3FQ8IUX4 373 aaKnown RBP11.87□□□□□ -0.51
COL6A2-207ENST00000460886 SUCLG2Q96I99 432 aa11.87□□□□□ -0.51
COL6A2-207ENST00000460886 CFHR5Q9BXR6 569 aa11.87□□□□□ -0.51
COL6A2-207ENST00000460886 CD209Q9NNX6 404 aa11.87□□□□□ -0.51
COL6A2-207ENST00000460886 SCAF8Q9UPN6 1271 aaKnown RBP11.87□□□□□ -0.51
COL6A2-207ENST00000460886 UTYO14607 1347 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 ARAP2Q8WZ64 1704 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 UBE2Q2LH0YL09 131 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 SASH1O94885 1247 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 IL1R1P14778 569 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 NF2P35240 595 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 GTF2IP78347 998 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 IFIT5Q13325 482 aaKnown RBP11.86□□□□□ -0.51
COL6A2-207ENST00000460886 EPHA10Q5JZY3 1008 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 LDLRAD1Q5T700 205 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 PRAMEF18Q5VWM3 479 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 CTU1Q7Z7A3 348 aaKnown RBP11.86□□□□□ -0.51
COL6A2-207ENST00000460886 KIAA0825Q8IV33 1275 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 FTSJ3Q8IY81 847 aaKnown RBP11.86□□□□□ -0.51
COL6A2-207ENST00000460886 DZIP1LQ8IYY4 767 aaKnown RBP11.86□□□□□ -0.51
COL6A2-207ENST00000460886 TMEM57Q8N5G2 664 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 HDAC9Q9UKV0 1011 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
COL6A2-207ENST00000460886 PDE4DIPQ5VU43 2346 aa11.85□□□□□ -0.51
COL6A2-207ENST00000460886 PLIN1O60240 522 aa11.85□□□□□ -0.51
COL6A2-207ENST00000460886 RLBP1P12271 317 aa11.85□□□□□ -0.51
COL6A2-207ENST00000460886 MAP3K11Q16584 847 aa11.85□□□□□ -0.51
COL6A2-207ENST00000460886 LMBR1LQ6UX01 489 aa11.85□□□□□ -0.51
COL6A2-207ENST00000460886 CERS5Q8N5B7 392 aa11.85□□□□□ -0.51
COL6A2-207ENST00000460886 KAZALD1Q96I82 304 aa11.85□□□□□ -0.51
COL6A2-207ENST00000460886 SSC5DA1L4H1 1573 aa11.84□□□□□ -0.51
COL6A2-207ENST00000460886 UNCXA6NJT0 531 aa11.84□□□□□ -0.51
COL6A2-207ENST00000460886 SNAP23O00161 211 aa11.84□□□□□ -0.51
COL6A2-207ENST00000460886 SLC34A2O95436 690 aa11.84□□□□□ -0.51
COL6A2-207ENST00000460886 UBTFL1P0CB47 393 aaPredicted RBP11.84□□□□□ -0.51
COL6A2-207ENST00000460886 KCNJ4P48050 445 aa11.84□□□□□ -0.51
COL6A2-207ENST00000460886 PKN2Q16513 984 aaKnown RBP11.84□□□□□ -0.51
COL6A2-207ENST00000460886 FBXW7Q969H0 707 aa11.84□□□□□ -0.51
COL6A2-207ENST00000460886 MEIS3Q99687 375 aa11.84□□□□□ -0.51
COL6A2-207ENST00000460886 BICC1Q9H694 974 aaKnown RBP11.84□□□□□ -0.51
COL6A2-207ENST00000460886 PPP2R3BQ9Y5P8 575 aa11.84□□□□□ -0.51
COL6A2-207ENST00000460886 TAF5LO75529 589 aa11.83□□□□□ -0.52
COL6A2-207ENST00000460886 PTPN12Q05209 780 aaKnown RBP11.83□□□□□ -0.52
COL6A2-207ENST00000460886 ARMC9Q7Z3E5 817 aa11.83□□□□□ -0.52
COL6A2-207ENST00000460886 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
COL6A2-207ENST00000460886 ITPRIPQ8IWB1 547 aa11.83□□□□□ -0.52
COL6A2-207ENST00000460886 PANK1Q8TE04 598 aa11.83□□□□□ -0.52
COL6A2-207ENST00000460886 DEFB129Q9H1M3 183 aa11.83□□□□□ -0.52
COL6A2-207ENST00000460886 HTTP42858 3142 aa11.83□□□□□ -0.52
COL6A2-207ENST00000460886 FAM205AQ6ZU69 1335 aa11.83□□□□□ -0.52
COL6A2-207ENST00000460886 SPDYE2BA6NHP3 402 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 GNAI3P08754 354 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 SPDYE6P0CI01 402 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 MS4A1P11836 297 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 SREBF2Q12772 1141 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 TTLL12Q14166 644 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-207ENST00000460886 DLGAP5Q15398 846 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 CCDC57Q2TAC2 916 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 SPRYD7Q5W111 196 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 ANKRD44Q8N8A2 993 aa11.82□□□□□ -0.52
COL6A2-207ENST00000460886 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-207ENST00000460886 HELBQ8NG08 1087 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-207ENST00000460886 ZNF296Q8WUU4 475 aaPredicted RBP11.82□□□□□ -0.52
COL6A2-207ENST00000460886 LRRFIP2Q9Y608 721 aaKnown RBP11.82□□□□□ -0.52
COL6A2-207ENST00000460886 GPR25O00155 361 aa11.81□□□□□ -0.52
COL6A2-207ENST00000460886 TBC1D8O95759 1140 aa11.81□□□□□ -0.52
COL6A2-207ENST00000460886 ZBTB48P10074 688 aaPredicted RBP11.81□□□□□ -0.52
COL6A2-207ENST00000460886 INHBEP58166 350 aa11.81□□□□□ -0.52
COL6A2-207ENST00000460886 UBE4AQ14139 1066 aa11.81□□□□□ -0.52
COL6A2-207ENST00000460886 RABL6Q3YEC7 729 aaPredicted RBP11.81□□□□□ -0.52
COL6A2-207ENST00000460886 TAF7LQ5H9L4 462 aa11.81□□□□□ -0.52
COL6A2-207ENST00000460886 LDHAL6AQ6ZMR3 332 aa11.81□□□□□ -0.52
COL6A2-207ENST00000460886 HDAC5Q9UQL6 1122 aa11.81□□□□□ -0.52
COL6A2-207ENST00000460886 OTOFQ9HC10 1997 aa11.81□□□□□ -0.52
COL6A2-207ENST00000460886 ALDH1A1P00352 501 aa11.8□□□□□ -0.52
COL6A2-207ENST00000460886 CFAP100Q494V2 611 aa11.8□□□□□ -0.52
COL6A2-207ENST00000460886 TDRD7Q8NHU6 1098 aaKnown RBP11.8□□□□□ -0.52
COL6A2-207ENST00000460886 ZNF594Q96JF6 807 aaPredicted RBP11.8□□□□□ -0.52
COL6A2-207ENST00000460886 PRMT6Q96LA8 375 aaPredicted RBP11.8□□□□□ -0.52
COL6A2-207ENST00000460886 ANGEL1Q9UNK9 670 aaKnown RBP11.8□□□□□ -0.52
COL6A2-207ENST00000460886 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
COL6A2-207ENST00000460886 PCDHAC2Q9Y5I4 1007 aa11.8□□□□□ -0.52
COL6A2-207ENST00000460886 MANSC4A6NHS7 340 aaPredicted RBP11.79□□□□□ -0.52
COL6A2-207ENST00000460886 MYO1BO43795 1136 aa11.79□□□□□ -0.52
COL6A2-207ENST00000460886 GNAI2P04899 355 aa11.79□□□□□ -0.52
COL6A2-207ENST00000460886 SUPT20HL1Q3ZLR7 823 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms