RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 GMLQ99445 158 aa17.24■□□□□ 0.35
HDLBP-229ENST00000460826 DBNLQ9UJU6 430 aaKnown RBP17.24■□□□□ 0.35
HDLBP-229ENST00000460826 KIF3CO14782 793 aa17.23■□□□□ 0.35
HDLBP-229ENST00000460826 IGHDP01880 384 aa17.23■□□□□ 0.35
HDLBP-229ENST00000460826 CHAF1AQ13111 956 aaPredicted RBP17.23■□□□□ 0.35
HDLBP-229ENST00000460826 AACSQ86V21 672 aa17.23■□□□□ 0.35
HDLBP-229ENST00000460826 BCL11AQ9H165 835 aa17.23■□□□□ 0.35
HDLBP-229ENST00000460826 GPRC5DQ9NZD1 345 aa17.23■□□□□ 0.35
HDLBP-229ENST00000460826 VEGFAP15692 232 aaPredicted RBP17.22■□□□□ 0.35
HDLBP-229ENST00000460826 AGBL3Q8NEM8 1001 aa17.22■□□□□ 0.35
HDLBP-229ENST00000460826 LRRCC1Q9C099 1032 aa17.22■□□□□ 0.35
HDLBP-229ENST00000460826 HACL1Q9UJ83 578 aa17.22■□□□□ 0.35
HDLBP-229ENST00000460826 MYO5AQ9Y4I1 1855 aaKnown RBP17.22■□□□□ 0.35
HDLBP-229ENST00000460826 FRAT2O75474 233 aaPredicted RBP17.21■□□□□ 0.35
HDLBP-229ENST00000460826 RPS12P25398 132 aaKnown RBP17.21■□□□□ 0.35
HDLBP-229ENST00000460826 GRIK5Q16478 980 aa17.21■□□□□ 0.35
HDLBP-229ENST00000460826 GORABQ5T7V8 394 aa17.21■□□□□ 0.35
HDLBP-229ENST00000460826 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
HDLBP-229ENST00000460826 CLASRPQ8N2M8 674 aaKnown RBP17.21■□□□□ 0.35
HDLBP-229ENST00000460826 DPF2Q92785 391 aa17.21■□□□□ 0.35
HDLBP-229ENST00000460826 TAF1DQ9H5J8 278 aaPredicted RBP17.21■□□□□ 0.35
HDLBP-229ENST00000460826 CNOT7Q9UIV1 285 aaKnown RBP17.21■□□□□ 0.35
HDLBP-229ENST00000460826 ADAMTSL1Q8N6G6 1762 aa17.2■□□□□ 0.34
HDLBP-229ENST00000460826 IQCA1LA6NCM1 817 aa17.2■□□□□ 0.34
HDLBP-229ENST00000460826 ARID4AP29374 1257 aaPredicted RBP17.2■□□□□ 0.34
HDLBP-229ENST00000460826 LMOD1P29536 600 aaPredicted RBP17.2■□□□□ 0.34
HDLBP-229ENST00000460826 EPHX2P34913 555 aa17.2■□□□□ 0.34
HDLBP-229ENST00000460826 RASGRF1Q13972 1273 aa17.2■□□□□ 0.34
HDLBP-229ENST00000460826 SCARF1Q14162 830 aa17.2■□□□□ 0.34
HDLBP-229ENST00000460826 RWDD1Q9H446 243 aaPredicted RBP17.2■□□□□ 0.34
HDLBP-229ENST00000460826 GNL3LQ9NVN8 582 aaKnown RBP17.2■□□□□ 0.34
HDLBP-229ENST00000460826 POLR2AP24928 1970 aaKnown RBP17.2■□□□□ 0.34
HDLBP-229ENST00000460826 EGFRP00533 1210 aa17.19■□□□□ 0.34
HDLBP-229ENST00000460826 POTEIP0CG38 1075 aa17.19■□□□□ 0.34
HDLBP-229ENST00000460826 POTEJP0CG39 1038 aa17.19■□□□□ 0.34
HDLBP-229ENST00000460826 FKBP1AP62942 108 aaKnown RBP17.19■□□□□ 0.34
HDLBP-229ENST00000460826 MFSD14BQ5SR56 506 aa17.19■□□□□ 0.34
HDLBP-229ENST00000460826 PI16Q6UXB8 463 aa17.19■□□□□ 0.34
HDLBP-229ENST00000460826 KIAA0825Q8IV33 1275 aa17.19■□□□□ 0.34
HDLBP-229ENST00000460826 TRPM4Q8TD43 1214 aa17.19■□□□□ 0.34
HDLBP-229ENST00000460826 MYO3BQ8WXR4 1341 aa17.19■□□□□ 0.34
HDLBP-229ENST00000460826 SEMA3EO15041 775 aa17.18■□□□□ 0.34
HDLBP-229ENST00000460826 ZBTB22O15209 634 aa17.18■□□□□ 0.34
HDLBP-229ENST00000460826 MCAMP43121 646 aa17.18■□□□□ 0.34
HDLBP-229ENST00000460826 TTC39AQ5SRH9 613 aa17.18■□□□□ 0.34
HDLBP-229ENST00000460826 SAMD7Q7Z3H4 446 aa17.18■□□□□ 0.34
HDLBP-229ENST00000460826 HMG20BQ9P0W2 317 aa17.18■□□□□ 0.34
HDLBP-229ENST00000460826 DENND2AQ9ULE3 1009 aa17.18■□□□□ 0.34
HDLBP-229ENST00000460826 F8W031 263 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-229ENST00000460826 IFIT2P09913 472 aaKnown RBP17.17■□□□□ 0.34
HDLBP-229ENST00000460826 USP17L8P0C7I0 530 aa17.17■□□□□ 0.34
HDLBP-229ENST00000460826 UQCRFS1P1P0C7P4 283 aa17.17■□□□□ 0.34
HDLBP-229ENST00000460826 HIRAP54198 1017 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-229ENST00000460826 ZNF280AP59817 542 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-229ENST00000460826 TBC1D10BQ4KMP7 808 aaPredicted RBP17.17■□□□□ 0.34
HDLBP-229ENST00000460826 CCDC158Q5M9N0 1113 aa17.17■□□□□ 0.34
HDLBP-229ENST00000460826 SMC5Q8IY18 1101 aa17.17■□□□□ 0.34
HDLBP-229ENST00000460826 GCC1Q96CN9 775 aa17.17■□□□□ 0.34
HDLBP-229ENST00000460826 ADARB2Q9NS39 739 aaKnown RBP17.17■□□□□ 0.34
HDLBP-229ENST00000460826 H7C1D1 291 aa17.16■□□□□ 0.34
HDLBP-229ENST00000460826 EAPPQ56P03 285 aaPredicted RBP17.16■□□□□ 0.34
HDLBP-229ENST00000460826 RBM26Q5T8P6 1007 aaKnown RBP17.16■□□□□ 0.34
HDLBP-229ENST00000460826 C16orf71Q8IYS4 520 aaPredicted RBP17.16■□□□□ 0.34
HDLBP-229ENST00000460826 WDR66Q8TBY9 1149 aa17.16■□□□□ 0.34
HDLBP-229ENST00000460826 TBC1D22AQ8WUA7 517 aa17.16■□□□□ 0.34
HDLBP-229ENST00000460826 SNRKQ9NRH2 765 aa17.16■□□□□ 0.34
HDLBP-229ENST00000460826 PDS5AQ29RF7 1337 aaKnown RBP17.16■□□□□ 0.34
HDLBP-229ENST00000460826 ECM29Q5VYK3 1845 aa17.15■□□□□ 0.34
HDLBP-229ENST00000460826 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
HDLBP-229ENST00000460826 SPATA5Q8NB90 893 aa17.15■□□□□ 0.34
HDLBP-229ENST00000460826 OTUD7AQ8TE49 926 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-229ENST00000460826 ZNF512BQ96KM6 892 aaPredicted RBP17.15■□□□□ 0.34
HDLBP-229ENST00000460826 PCDHAC2Q9Y5I4 1007 aa17.15■□□□□ 0.34
HDLBP-229ENST00000460826 NDUFB9Q9Y6M9 179 aa17.15■□□□□ 0.34
HDLBP-229ENST00000460826 MYH2Q9UKX2 1941 aa17.15■□□□□ 0.34
HDLBP-229ENST00000460826 PRDX5P30044 214 aa17.14■□□□□ 0.33
HDLBP-229ENST00000460826 B4GALNT3Q6L9W6 998 aa17.14■□□□□ 0.33
HDLBP-229ENST00000460826 USP50Q70EL3 339 aaPredicted RBP17.14■□□□□ 0.33
HDLBP-229ENST00000460826 MYOZ2Q9NPC6 264 aa17.14■□□□□ 0.33
HDLBP-229ENST00000460826 TTF2Q9UNY4 1162 aaKnown RBP17.14■□□□□ 0.33
HDLBP-229ENST00000460826 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
HDLBP-229ENST00000460826 DOCK2Q92608 1830 aa17.14■□□□□ 0.33
HDLBP-229ENST00000460826 NEFLP07196 543 aa17.13■□□□□ 0.33
HDLBP-229ENST00000460826 ZAP70P43403 619 aa17.13■□□□□ 0.33
HDLBP-229ENST00000460826 KIF4BQ2VIQ3 1234 aa17.13■□□□□ 0.33
HDLBP-229ENST00000460826 TBC1D9Q6ZT07 1266 aa17.13■□□□□ 0.33
HDLBP-229ENST00000460826 PNMA8AQ86V59 439 aaPredicted RBP17.13■□□□□ 0.33
HDLBP-229ENST00000460826 ASTN2O75129 1339 aaPredicted RBP17.13■□□□□ 0.33
HDLBP-229ENST00000460826 CYP2E1P05181 493 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-229ENST00000460826 TSHZ3Q63HK5 1081 aa17.12■□□□□ 0.33
HDLBP-229ENST00000460826 OGFOD1Q8N543 542 aa17.12■□□□□ 0.33
HDLBP-229ENST00000460826 ZBED3Q96IU2 234 aaPredicted RBP17.12■□□□□ 0.33
HDLBP-229ENST00000460826 ABCF2Q9UG63 623 aa17.12■□□□□ 0.33
HDLBP-229ENST00000460826 HDAC9Q9UKV0 1011 aa17.12■□□□□ 0.33
HDLBP-229ENST00000460826 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
HDLBP-229ENST00000460826 AOX1Q06278 1338 aa17.12■□□□□ 0.33
HDLBP-229ENST00000460826 MAST2Q6P0Q8 1798 aa17.11■□□□□ 0.33
HDLBP-229ENST00000460826 TOMM70O94826 608 aa17.11■□□□□ 0.33
HDLBP-229ENST00000460826 NBPF9Q3BBW0 867 aa17.11■□□□□ 0.33
HDLBP-229ENST00000460826 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms